Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0508
(311 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024 90 3e-19
12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202 88 2e-18
01_01_1068 - 8413269-8413589,8414011-8414262,8417472-8417603,841... 88 2e-18
06_01_0853 + 6486027-6486158,6486561-6486692,6486974-6486978,648... 79 5e-16
02_05_0413 + 28773869-28773925,28774045-28774135,28774515-287746... 44 3e-05
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 43 6e-05
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 43 6e-05
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 43 6e-05
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 43 6e-05
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 43 6e-05
10_08_1062 + 22626262-22626318,22626404-22626494,22626601-226267... 42 1e-04
06_01_0098 + 818374-818427,818537-818627,818753-818868,818962-81... 42 1e-04
02_01_0226 + 1476529-1476585,1477207-1477297,1478247-1478362,147... 40 3e-04
08_01_0921 + 9075409-9075511,9075606-9075689,9075744-9075806,907... 39 0.001
12_01_0028 + 242016-242467,242547-242918,243027-243182,245007-24... 38 0.002
11_01_0029 + 226459-226973,227053-227424,227533-227688,229513-22... 38 0.002
11_06_0218 + 21361975-21362314,21362463-21362545,21363870-213639... 36 0.009
03_02_0046 - 5255513-5255630,5255715-5255876,5256579-5256733,525... 33 0.036
07_01_0844 + 6855195-6855342,6855752-6855802,6856460-6856530,685... 32 0.082
03_03_0224 + 15580944-15581036,15581630-15581770,15582385-155824... 31 0.25
07_03_1298 - 25592788-25592890,25593126-25593229,25593747-255938... 29 0.77
02_02_0711 - 13180406-13180423,13180483-13180563,13181026-131811... 29 0.77
03_06_0651 + 35297560-35297895,35298881-35298991,35299670-352997... 28 1.8
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 27 3.1
03_05_1048 - 29950860-29951396,29951810-29952676 27 3.1
11_01_0724 + 5981680-5981748,5982301-5982397,5982496-5982593,598... 27 4.1
06_03_0156 + 17332048-17333550,17334195-17334362,17334715-17335089 27 4.1
02_05_0731 + 31299466-31299643,31300369-31300673,31300992-31301660 27 4.1
09_03_0052 + 11904633-11905616,11906324-11906491,11906588-11906977 26 5.4
05_07_0328 + 29286109-29286120,29286982-29287146,29288427-292885... 26 5.4
01_06_0840 + 32343700-32344138,32345329-32345419,32345584-323458... 26 5.4
01_01_0585 - 4328725-4329030,4329333-4329551,4329752-4329820,432... 26 5.4
11_08_0079 + 28189782-28189907,28190445-28190553,28190876-281909... 26 7.2
09_02_0496 - 9892242-9892499,9892956-9893045,9893046-9893094,989... 26 7.2
05_04_0153 + 18536874-18537266,18537369-18537436,18537511-185377... 26 7.2
12_01_0652 - 5512187-5512273,5512844-5513950 25 9.5
11_02_0075 - 8051057-8051815 25 9.5
04_04_1522 + 34144288-34145550 25 9.5
>01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024
Length = 193
Score = 90.2 bits (214), Expect = 3e-19
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = +2
Query: 143 KSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
+ A FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEELSIG ++F FDLGG
Sbjct: 18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGG 73
Score = 39.9 bits (89), Expect = 4e-04
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +1
Query: 91 MFILDWFTGVLGFLGLWKKSGKLLVSG 171
MF+ DWF GVL LGLW+K K+L G
Sbjct: 1 MFLWDWFYGVLASLGLWQKEAKILFLG 27
>12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202
Length = 193
Score = 87.8 bits (208), Expect = 2e-18
Identities = 40/56 (71%), Positives = 45/56 (80%)
Frame = +2
Query: 143 KSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
+ A FLGLDNAGKTTLLHMLKD+RL QH PT +PTSEELSIG ++F FDLGG
Sbjct: 18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGG 73
Score = 41.1 bits (92), Expect = 2e-04
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 91 MFILDWFTGVLGFLGLWKKSGKLLVSG 171
MF++DWF GVL LGLW+K K+L G
Sbjct: 1 MFLVDWFYGVLASLGLWQKEAKILFLG 27
>01_01_1068 -
8413269-8413589,8414011-8414262,8417472-8417603,
8417684-8417812
Length = 277
Score = 87.8 bits (208), Expect = 2e-18
Identities = 40/56 (71%), Positives = 45/56 (80%)
Frame = +2
Query: 143 KSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
+ A FLGLDNAGKTTLLHMLKD+RL QH PT +PTSEELSIG ++F FDLGG
Sbjct: 18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGG 73
Score = 41.1 bits (92), Expect = 2e-04
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 91 MFILDWFTGVLGFLGLWKKSGKLLVSG 171
MF++DWF GVL LGLW+K K+L G
Sbjct: 1 MFLVDWFYGVLASLGLWQKEAKILFLG 27
>06_01_0853 +
6486027-6486158,6486561-6486692,6486974-6486978,
6487948-6488017,6489456-6489776
Length = 219
Score = 79.4 bits (187), Expect = 5e-16
Identities = 37/56 (66%), Positives = 41/56 (73%)
Frame = +2
Query: 143 KSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
+ A FLGLDNAGKTTL +ML + LA H PT HPTSEELSIG +RF FDLGG
Sbjct: 19 QKEAKILFLGLDNAGKTTLFYMLSQENLAVHQPTQHPTSEELSIGRIRFKAFDLGG 74
Score = 36.7 bits (81), Expect = 0.004
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 94 FILDWFTGVLGFLGLWKKSGKLLVSG 171
F+LDWF VL +GLW+K K+L G
Sbjct: 3 FLLDWFYDVLASIGLWQKEAKILFLG 28
>02_05_0413 +
28773869-28773925,28774045-28774135,28774515-28774630,
28775627-28775686,28775767-28775832,28776499-28776693
Length = 194
Score = 43.6 bits (98), Expect = 3e-05
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +2
Query: 137 YGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
+G S LGLD AGKTT+L+ L + VPT+ E++ ++ FT +D+GG
Sbjct: 13 FGTSEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVMFTVWDVGG 70
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 42.7 bits (96), Expect = 6e-05
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 134 VYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
++ K +GLD AGKTT+L+ LK + +PT+ E + ++ FT +D+GG
Sbjct: 135 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGG 193
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 42.7 bits (96), Expect = 6e-05
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 134 VYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
++ K +GLD AGKTT+L+ LK + +PT+ E + ++ FT +D+GG
Sbjct: 12 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGG 70
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 42.7 bits (96), Expect = 6e-05
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 134 VYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
++ K +GLD AGKTT+L+ LK + +PT+ E + ++ FT +D+GG
Sbjct: 12 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGG 70
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 42.7 bits (96), Expect = 6e-05
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 134 VYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
++ K +GLD AGKTT+L+ LK + +PT+ E + ++ FT +D+GG
Sbjct: 12 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGG 70
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 42.7 bits (96), Expect = 6e-05
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 134 VYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
++ K +GLD AGKTT+L+ LK + +PT+ E + ++ FT +D+GG
Sbjct: 12 LFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGG 70
>10_08_1062 +
22626262-22626318,22626404-22626494,22626601-22626716,
22627035-22627094,22627204-22627269,22627726-22627914
Length = 192
Score = 41.5 bits (93), Expect = 1e-04
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2
Query: 137 YGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
+G LGLD AGKTT+L+ L + VPT+ E++ ++ FT +D+GG
Sbjct: 13 FGNKEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVVFTVWDVGG 70
>06_01_0098 +
818374-818427,818537-818627,818753-818868,818962-819087,
819175-819357
Length = 189
Score = 41.5 bits (93), Expect = 1e-04
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = +2
Query: 167 LGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
LGLD AGKTT+L+ L + +PT+ E++ ++ FT +D+GG
Sbjct: 22 LGLDAAGKTTILYRLHIGEVLSSIPTIGFNVEKVEYKNVAFTVWDVGG 69
>02_01_0226 +
1476529-1476585,1477207-1477297,1478247-1478362,
1478834-1478893,1479000-1479065,1479847-1480047
Length = 196
Score = 40.3 bits (90), Expect = 3e-04
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +2
Query: 167 LGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
LGLD AGKTT+L+ L + VPT+ E++ ++ FT +D+GG
Sbjct: 23 LGLDAAGKTTILYRLHMGEVLSTVPTVGFNVEKVQYKNVVFTVWDVGG 70
>08_01_0921 +
9075409-9075511,9075606-9075689,9075744-9075806,
9077163-9077181,9078227-9078338,9078902-9078949,
9079372-9079502,9079673-9079757,9079776-9079784
Length = 217
Score = 38.7 bits (86), Expect = 0.001
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +2
Query: 134 VYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEEL 268
V+G A LGLDNAGKTT+L+ L+ + +P+ P + L
Sbjct: 12 VFGNREARILVLGLDNAGKTTILYRLQMGEVVSTIPSGFPAPDSL 56
>12_01_0028 +
242016-242467,242547-242918,243027-243182,245007-245089,
245159-245222,245704-246001,246616-246726,247059-247100
Length = 525
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2
Query: 50 D*VINIVQFNYIQKCLSSTGSLECWDFLVY 139
D VI QFN + C+S+TGSLE W+ L Y
Sbjct: 340 DAVITFCQFNIDEPCISATGSLELWNILKY 369
>11_01_0029 +
226459-226973,227053-227424,227533-227688,229513-229595,
229665-229728,230209-230596
Length = 525
Score = 37.5 bits (83), Expect = 0.002
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2
Query: 50 D*VINIVQFNYIQKCLSSTGSLECWDFLVY 139
D VI QFN + C+S+TGSLE W+ L Y
Sbjct: 361 DAVITFCQFNIDEPCISATGSLELWNILKY 390
>11_06_0218 +
21361975-21362314,21362463-21362545,21363870-21363965,
21364451-21364813
Length = 293
Score = 35.5 bits (78), Expect = 0.009
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +2
Query: 128 FLVYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRF 289
FL++ +GLDNAGKTT L+ L PT+ EE+ ++RF
Sbjct: 10 FLMFPAKEYKIVVVGLDNAGKTTTLYKLHLGEAVTAAPTIGSNVEEVVFKNIRF 63
>03_02_0046 -
5255513-5255630,5255715-5255876,5256579-5256733,
5256811-5256892,5257790-5257827
Length = 184
Score = 33.5 bits (73), Expect = 0.036
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +2
Query: 122 WDFLVYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQH-VPTLHPTSEELSIGSMRFTTF 298
W ++ K +GL NAGKT+L++++ ++ +PT+ +++ G++ +
Sbjct: 10 WLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGFSEDMIPTVGFNMRKVTKGNVTIKLW 69
Query: 299 DLGG 310
DLGG
Sbjct: 70 DLGG 73
>07_01_0844 +
6855195-6855342,6855752-6855802,6856460-6856530,
6856736-6856855,6857043-6857161,6857377-6857458,
6857592-6857597
Length = 198
Score = 32.3 bits (70), Expect = 0.082
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 134 VYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTL 247
++ K +GLD AGKTT+L+ LK + +PT+
Sbjct: 12 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 49
>03_03_0224 +
15580944-15581036,15581630-15581770,15582385-15582493,
15582598-15582659,15583704-15583807,15584058-15584160
Length = 203
Score = 30.7 bits (66), Expect = 0.25
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Frame = +2
Query: 122 WDFLVYGKSRASSWFLGLDNAGKTTLLHMLKDDRLA-------QHVPTLHPTSEELSIGS 280
W + ++ K+ LG+D AGKTTLL +K L + VPT+ + +
Sbjct: 9 WKY-IFNKTEFHVLILGVDKAGKTTLLEKIKSIYLKGEGLTPDRIVPTVGLNIGRIEDAN 67
Query: 281 MRFTTFDLGG 310
+ +DLGG
Sbjct: 68 AKLVFWDLGG 77
>07_03_1298 -
25592788-25592890,25593126-25593229,25593747-25593808,
25593957-25594065,25594215-25594355,25594707-25594769,
25594974-25595084,25596140-25596457
Length = 336
Score = 29.1 bits (62), Expect = 0.77
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Frame = +2
Query: 134 VYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQH-------VPTLHPTSEELSIGSMRFT 292
V+ K+ LG+ AGKTTLL +K L + VPT+ + +++
Sbjct: 145 VFSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLNIGRIEDANVKLV 204
Query: 293 TFDLGG 310
+DLGG
Sbjct: 205 FWDLGG 210
>02_02_0711 -
13180406-13180423,13180483-13180563,13181026-13181188,
13182096-13182206,13182365-13182429
Length = 145
Score = 29.1 bits (62), Expect = 0.77
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 167 LGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
+GLDN+GKTT++ + + PTL + + +D+GG
Sbjct: 22 VGLDNSGKTTIVLKINGEDTGVISPTLGFNIKTIKYHKYSLNIWDIGG 69
>03_06_0651 +
35297560-35297895,35298881-35298991,35299670-35299744,
35300165-35300225,35300406-35300479,35300564-35300668,
35301099-35301206,35301604-35301707,35302005-35302223,
35302505-35302646,35302694-35302825,35302962-35303066
Length = 523
Score = 27.9 bits (59), Expect = 1.8
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 143 KSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVP 241
K A W G+ N+ +T +L +LKD A HVP
Sbjct: 93 KEAAGDWLSGITNSMET-VLKVLKDGLSALHVP 124
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1
Query: 233 VEQVYHLSTYVRVLSSLHCQVPETKSLPDFFHRP 132
VEQ +HL +VR L LHC + +P P
Sbjct: 251 VEQAHHLLCHVRPLLLLHCTLAPHLCVPRVLSPP 284
>03_05_1048 - 29950860-29951396,29951810-29952676
Length = 467
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 77 NYIQKCLSSTGSLECWDFLVYGKSRA 154
NYIQ+ ++ST S EC F K RA
Sbjct: 420 NYIQRLIASTLSYECTSFTRKDKYRA 445
>11_01_0724 +
5981680-5981748,5982301-5982397,5982496-5982593,
5983535-5983690,5983986-5984063,5984135-5984266,
5984856-5984936,5985442-5985510,5985597-5985686,
5986001-5986145,5986218-5986276,5986384-5986479,
5986561-5986628,5986704-5986803,5986910-5986966,
5987179-5987337
Length = 517
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +2
Query: 68 VQFNYIQKCLSSTGSLECWDFLVYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTL 247
++F + K + +L +L G SSW ++ +G+ + LA + TL
Sbjct: 133 IKFGGLAKAVKKGDTLFIGQYLFTGSETTSSWLEVVETSGENVECLVTNTATLAGPMFTL 192
Query: 248 HPTSEELSIGSM 283
H + +S+ ++
Sbjct: 193 HVSKAHVSLPTL 204
>06_03_0156 + 17332048-17333550,17334195-17334362,17334715-17335089
Length = 681
Score = 26.6 bits (56), Expect = 4.1
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 149 RASSWFLGLDNAGKTTLLH 205
R++ W +G NAGK+TL++
Sbjct: 407 RSNVWVIGAQNAGKSTLIN 425
>02_05_0731 + 31299466-31299643,31300369-31300673,31300992-31301660
Length = 383
Score = 26.6 bits (56), Expect = 4.1
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = -3
Query: 306 PRSNVVKRILPIDSSSDVGCKVGTC*ASLSSFNICKSVVFPALSSPRNQELARLFP*TKK 127
P+ +++I+P + S + C++ S + + S V P LSS A + T++
Sbjct: 149 PQKKPLEKIIPPNDSWAI-CRIFKKTNSTAQRALSHSWVSPPLSSTNEAYTAPVSQTTQR 207
Query: 126 SQHSSE 109
SQH+S+
Sbjct: 208 SQHTSD 213
>09_03_0052 + 11904633-11905616,11906324-11906491,11906588-11906977
Length = 513
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 146 SRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTL 247
SR + W +G N GK+TLL+ + + PTL
Sbjct: 232 SRGNVWAVGARNVGKSTLLNAIARCSGIEGGPTL 265
>05_07_0328 + 29286109-29286120,29286982-29287146,29288427-29288589,
29288625-29288903,29289047-29289122,29289725-29289787,
29292116-29292164,29292413-29292504,29293017-29293068,
29293209-29293271,29293382-29293431,29293941-29294016,
29294444-29294656,29294763-29294869,29294966-29295074,
29295489-29295689,29295773-29296033,29296154-29296171,
29296287-29296397,29296755-29297030,29297108-29297382,
29297814-29298165,29298371-29298655,29298715-29299261,
29301658-29301781,29301871-29301946,29302062-29302136,
29302300-29302353,29302833-29302892,29302977-29303093,
29303228-29303361,29303480-29303682,29303879-29303976,
29304358-29304461,29304537-29304702,29304803-29304925,
29305047-29305129,29305217-29305358,29305523-29305549,
29305784-29305854,29305930-29306518
Length = 2046
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 215 DDRLAQHVPTLHPTSEELSIGSMRFTTFDLG 307
+DRLA VP+ P SEE S+ + +G
Sbjct: 1870 NDRLAASVPSSSPNSEETSLNTEETDEVQIG 1900
>01_06_0840 +
32343700-32344138,32345329-32345419,32345584-32345866,
32346023-32346097,32346470-32346514,32346889-32346979,
32347060-32347118,32347621-32347704,32348109-32348168,
32348585-32348637,32348724-32348757,32349334-32350335,
32350477-32351035,32351873-32352372,32352793-32353200
Length = 1260
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 221 YHLSTYVRVLSSLHCQVPETKSLP 150
YHL + R S L Q+PE K +P
Sbjct: 742 YHLYSRFRAASLLEYQIPEIKRMP 765
>01_01_0585 -
4328725-4329030,4329333-4329551,4329752-4329820,
4329925-4331469,4332220-4332429,4332563-4332713,
4332791-4333031,4333898-4333956,4334379-4334653,
4334813-4334955,4335034-4335088,4335181-4335258,
4335351-4335478,4335533-4335575
Length = 1173
Score = 26.2 bits (55), Expect = 5.4
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +2
Query: 74 FNYIQKCLSSTGSL-EC-WDFLVYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTL 247
F + CL++ +L +C WD + +RASS + +D GKT + K + L H+ TL
Sbjct: 786 FRRSRPCLNALSALKQCKWDAEI--STRASSLYHLIDLHGKTVTSIVNKAEPLEAHL-TL 842
Query: 248 HPTSEE 265
P ++
Sbjct: 843 TPVKKD 848
>11_08_0079 +
28189782-28189907,28190445-28190553,28190876-28190958,
28191500-28191562,28191658-28192854,28193247-28193310,
28193338-28193426,28194404-28194463,28195442-28195547,
28196057-28196069,28196940-28197111
Length = 693
Score = 25.8 bits (54), Expect = 7.2
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 143 KSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTF 298
KS A +G+ NAGK+TLL L R + T+ +IGS+ + +
Sbjct: 337 KSIADVGLVGMPNAGKSTLLSAL--SRARPEIADYAFTTLRPNIGSLTYEDY 386
>09_02_0496 -
9892242-9892499,9892956-9893045,9893046-9893094,
9893330-9893557,9894095-9894261,9894312-9894395,
9894614-9894820,9894919-9895251,9895371-9895513,
9895607-9895723,9895824-9895980,9896054-9896157,
9896272-9896432,9896518-9896707,9896732-9896834,
9896950-9897231,9897327-9897649,9897750-9897786,
9898109-9898162,9898292-9898368,9898449-9898502,
9898738-9898822,9900289-9900426,9900592-9900603
Length = 1150
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 167 LGLDNAGKTTLLHMLKDDRLAQHV 238
+G+ AGKTTLL +L + + H+
Sbjct: 710 MGISGAGKTTLLDVLAGRKTSGHI 733
>05_04_0153 +
18536874-18537266,18537369-18537436,18537511-18537721,
18537918-18538036,18538103-18538172,18538260-18538331,
18538472-18538585,18540633-18540698
Length = 370
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 170 GLDNAGKTTLLHMLKDDRLAQHVPTL 247
G D G T +LH K D L +PTL
Sbjct: 95 GSDMGGFTRILHSGKPDGLMDEIPTL 120
>12_01_0652 - 5512187-5512273,5512844-5513950
Length = 397
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 170 GLDNAGKTTLLHMLKDDRL 226
G+ AGKTTLL + +D R+
Sbjct: 212 GMGGAGKTTLLKLARDPRV 230
>11_02_0075 - 8051057-8051815
Length = 252
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -3
Query: 300 SNVVKRILPIDSSSDVGCK 244
+++ +++L I SSDVGCK
Sbjct: 216 ADIFEKLLAIPDSSDVGCK 234
>04_04_1522 + 34144288-34145550
Length = 420
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +2
Query: 107 GSLECWDFLVYGKSRASSWFLGLDNAGKTTLL 202
G L WD + G S F G D AG T++
Sbjct: 158 GFLPAWDLWLVGSSGGLVCFSGFDGAGFRTVV 189
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,470,602
Number of Sequences: 37544
Number of extensions: 133455
Number of successful extensions: 450
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 388087168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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