Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0508
(311 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g09180.1 68414.m01025 GTP-binding protein, putative strong si... 91 1e-19
At4g02080.1 68417.m00279 GTP-binding protein (SAR1A) identical t... 90 3e-19
At3g62560.1 68416.m07028 GTP-binding protein, putative similar t... 90 3e-19
At1g56330.1 68414.m06475 GTP-binding protein (SAR1B) identical t... 90 3e-19
At2g24765.1 68415.m02959 ADP-ribosylation factor 3 (ARF3) identi... 50 3e-07
At2g15310.1 68415.m01746 ADP-ribosylation factor, putative simil... 44 2e-05
At3g22950.1 68416.m02893 ADP-ribosylation factor, putative simil... 44 3e-05
At5g14670.1 68418.m01719 ADP-ribosylation factor, putative simil... 43 5e-05
At3g62290.1 68416.m06998 ADP-ribosylation factor identical to GP... 43 5e-05
At2g47170.1 68415.m05890 ADP-ribosylation factor 1 (ARF1) identi... 43 5e-05
At1g70490.3 68414.m08112 ADP-ribosylation factor, putative nearl... 43 5e-05
At1g70490.2 68414.m08111 ADP-ribosylation factor, putative nearl... 43 5e-05
At1g70490.1 68414.m08110 ADP-ribosylation factor, putative nearl... 43 5e-05
At1g23490.1 68414.m02948 ADP-ribosylation factor identical to SP... 43 5e-05
At1g10630.1 68414.m01205 ADP-ribosylation factor, putative simil... 43 5e-05
At5g17060.1 68418.m01999 ADP-ribosylation factor, putative simil... 42 7e-05
At3g03120.1 68416.m00308 ADP-ribosylation factor, putative simil... 42 1e-04
At5g67560.1 68418.m08519 ADP-ribosylation factor, putative ident... 34 0.023
At3g49870.1 68416.m05452 ADP-ribosylation factor, putative simil... 33 0.053
At5g52210.2 68418.m06481 ADP-ribosylation factor, putative simil... 32 0.070
At5g52210.1 68418.m06480 ADP-ribosylation factor, putative simil... 32 0.070
At5g45730.1 68418.m05622 DC1 domain-containing protein contains ... 29 0.87
At2g18390.1 68415.m02142 ADP-ribosylation factor-like protein 2 ... 28 1.1
At3g57180.1 68416.m06366 expressed protein 27 2.0
At1g23120.1 68414.m02890 major latex protein-related / MLP-relat... 27 2.0
At1g07620.1 68414.m00817 GTP1/OBG family protein similar to SP|P... 27 2.6
At3g11430.1 68416.m01394 phospholipid/glycerol acyltransferase f... 27 3.5
At5g18490.1 68418.m02181 expressed protein 26 6.1
At5g41840.1 68418.m05095 F-box family protein contains F-box dom... 25 8.1
At5g11580.1 68418.m01350 UVB-resistance protein-related / regula... 25 8.1
At4g05540.1 68417.m00843 tRNA-splicing endonuclease positive eff... 25 8.1
At2g41700.1 68415.m05151 ABC transporter family protein similar ... 25 8.1
At1g74450.1 68414.m08625 expressed protein 25 8.1
At1g61460.1 68414.m06925 S-locus protein kinase, putative contai... 25 8.1
>At1g09180.1 68414.m01025 GTP-binding protein, putative strong
similarity to SP:Q01474 GTP-binding protein SAR1B and
SP:O04834 GTP-binding protein SAR1A [Arabidopsis
thaliana]
Length = 193
Score = 91.1 bits (216), Expect = 1e-19
Identities = 42/56 (75%), Positives = 44/56 (78%)
Frame = +2
Query: 143 KSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
K A FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEELSIG + F FDLGG
Sbjct: 18 KKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKINFKAFDLGG 73
Score = 36.7 bits (81), Expect = 0.003
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 91 MFILDWFTGVLGFLGLWKKSGKLLVSG 171
MF+ DWF G+L LGL KK K+L G
Sbjct: 1 MFLFDWFYGILASLGLCKKEAKILFLG 27
>At4g02080.1 68417.m00279 GTP-binding protein (SAR1A) identical to
SP:O04834 GTP-binding protein SAR1A. [Arabidopsis
thaliana]
Length = 193
Score = 90.2 bits (214), Expect = 3e-19
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = +2
Query: 143 KSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
+ A FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEELSIG ++F FDLGG
Sbjct: 18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGG 73
Score = 41.1 bits (92), Expect = 2e-04
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 91 MFILDWFTGVLGFLGLWKKSGKLLVSG 171
MF++DWF GVL LGLW+K K+L G
Sbjct: 1 MFMIDWFYGVLASLGLWQKEAKILFLG 27
>At3g62560.1 68416.m07028 GTP-binding protein, putative similar to
GTP-binding protein SAR1A (SP:O04834) [Arabidopsis
thaliana]; small GTP-binding protein Bsar1a - Brassica
campestris, EMBL:U55035
Length = 193
Score = 90.2 bits (214), Expect = 3e-19
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = +2
Query: 143 KSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
+ A FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEELSIG ++F FDLGG
Sbjct: 18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGG 73
Score = 41.1 bits (92), Expect = 2e-04
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 91 MFILDWFTGVLGFLGLWKKSGKLLVSG 171
MF++DWF GVL LGLW+K K+L G
Sbjct: 1 MFLVDWFYGVLATLGLWQKEAKILFLG 27
>At1g56330.1 68414.m06475 GTP-binding protein (SAR1B) identical to
GTP-binding protein (SAR1B) [Arabidopsis thaliana]
SP:Q01474
Length = 193
Score = 90.2 bits (214), Expect = 3e-19
Identities = 41/56 (73%), Positives = 45/56 (80%)
Frame = +2
Query: 143 KSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
+ A FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEELSIG ++F FDLGG
Sbjct: 18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGG 73
Score = 40.3 bits (90), Expect = 3e-04
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +1
Query: 91 MFILDWFTGVLGFLGLWKKSGKLLVSG 171
MF+ DWF G+L LGLW+K K+L G
Sbjct: 1 MFLFDWFYGILASLGLWQKEAKILFLG 27
>At2g24765.1 68415.m02959 ADP-ribosylation factor 3 (ARF3) identical
to GP:453191 ADP-ribosylation factor 3 {Arabidopsis
thaliana}; contains domain PF00025: ADP-ribosylation
factor family
Length = 182
Score = 50.0 bits (114), Expect = 3e-07
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = +2
Query: 134 VYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
V+G A LGLDNAGKTT+L+ L+ + +PT+ E + +++F +DLGG
Sbjct: 12 VFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGG 70
>At2g15310.1 68415.m01746 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor (GI:861205) [Chlamydomonas
reinhardtii]
Length = 205
Score = 44.0 bits (99), Expect = 2e-05
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +2
Query: 143 KSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
KS+ +GLD +GKTT+L+ LK + VPT+ E + + FT +D+GG
Sbjct: 15 KSKVRILMVGLDGSGKTTILYKLKLGEVVTTVPTIGFNLETVEYKGINFTVWDIGG 70
>At3g22950.1 68416.m02893 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GB:P91924 [Dugesia japonica]
Length = 183
Score = 43.6 bits (98), Expect = 3e-05
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +2
Query: 128 FLVYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLG 307
F+++ +GLDNAGKTT L+ L + PT+ EEL ++RF +DLG
Sbjct: 10 FMMFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLG 69
Query: 308 G 310
G
Sbjct: 70 G 70
>At5g14670.1 68418.m01719 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor DcARF1 (GI:965483) [Daucus
carota].
Length = 188
Score = 42.7 bits (96), Expect = 5e-05
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 134 VYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
++ K +GLD AGKTT+L+ LK + +PT+ E + ++ FT +D+GG
Sbjct: 12 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGG 70
>At3g62290.1 68416.m06998 ADP-ribosylation factor identical to
GP:166586 ADP-ribosylation factor {Arabidopsis
thaliana}; ADP-ribosylation factor 1 - Arabidopsis
thaliana, PIR:S28875
Length = 181
Score = 42.7 bits (96), Expect = 5e-05
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 134 VYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
++ K +GLD AGKTT+L+ LK + +PT+ E + ++ FT +D+GG
Sbjct: 12 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGG 70
>At2g47170.1 68415.m05890 ADP-ribosylation factor 1 (ARF1) identical
to ADP-ribosylation factor ARF1({Arabidopsis thaliana}
(SP:P36397) (GP:166586)
Length = 181
Score = 42.7 bits (96), Expect = 5e-05
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 134 VYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
++ K +GLD AGKTT+L+ LK + +PT+ E + ++ FT +D+GG
Sbjct: 12 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGG 70
>At1g70490.3 68414.m08112 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 42.7 bits (96), Expect = 5e-05
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 134 VYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
++ K +GLD AGKTT+L+ LK + +PT+ E + ++ FT +D+GG
Sbjct: 12 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGG 70
>At1g70490.2 68414.m08111 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 42.7 bits (96), Expect = 5e-05
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 134 VYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
++ K +GLD AGKTT+L+ LK + +PT+ E + ++ FT +D+GG
Sbjct: 12 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGG 70
>At1g70490.1 68414.m08110 ADP-ribosylation factor, putative nearly
identical to ADP-ribosylation factor 1 GB:P36397
[Arabidopsis thaliana], ADP-ribosylation factor
GI:166586 [Arabidopsis thaliana]
Length = 181
Score = 42.7 bits (96), Expect = 5e-05
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 134 VYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
++ K +GLD AGKTT+L+ LK + +PT+ E + ++ FT +D+GG
Sbjct: 12 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGG 70
>At1g23490.1 68414.m02948 ADP-ribosylation factor identical to
SP:Q9SRC3 ADP-ribosylation factor 1-like [Arabidopsis
thaliana], ADP-ribosylation factor GI:166586
[Arabidopsis thaliana]
Length = 181
Score = 42.7 bits (96), Expect = 5e-05
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 134 VYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
++ K +GLD AGKTT+L+ LK + +PT+ E + ++ FT +D+GG
Sbjct: 12 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGG 70
>At1g10630.1 68414.m01205 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GI:166586 from [Arabidopsis
thaliana]
Length = 181
Score = 42.7 bits (96), Expect = 5e-05
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 134 VYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
++ K +GLD AGKTT+L+ LK + +PT+ E + ++ FT +D+GG
Sbjct: 12 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGG 70
>At5g17060.1 68418.m01999 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor 1; ARF 1 (GP:385340)
{Drosophila melanogaster)
Length = 192
Score = 42.3 bits (95), Expect = 7e-05
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2
Query: 137 YGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
+G LGLD AGKTT+L+ L + VPT+ E++ ++ FT +D+GG
Sbjct: 13 FGNQEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVMFTVWDVGG 70
>At3g03120.1 68416.m00308 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor 1; ARF 1 (GP:385340)
{Drosophila melanogaster}
Length = 192
Score = 41.5 bits (93), Expect = 1e-04
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2
Query: 137 YGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
+G LGLD AGKTT+L+ L + VPT+ E++ ++ FT +D+GG
Sbjct: 13 FGNQEMRVVMLGLDAAGKTTILYKLHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGG 70
>At5g67560.1 68418.m08519 ADP-ribosylation factor, putative
identical to GP:15450888 ADP-ribosylation factor-like
protein {Arabidopsis thaliana]
Length = 184
Score = 33.9 bits (74), Expect = 0.023
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +2
Query: 122 WDFLVYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQH-VPTLHPTSEELSIGSMRFTTF 298
W ++ K +GL NAGKT+L++++ ++ +PT+ +++ GS+ +
Sbjct: 10 WLRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGSVTIKLW 69
Query: 299 DLGG 310
DLGG
Sbjct: 70 DLGG 73
>At3g49870.1 68416.m05452 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor-like protein 1 (SP:P40616)
[Homo sapiens]; ARF3 ADP-RIBOSYLATION FACTOR,GP:453191
Arabidopsis thaliana; contains domain PF00025:
ADP-ribosylation factor family
Length = 184
Score = 32.7 bits (71), Expect = 0.053
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +2
Query: 122 WDFLVYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQH-VPTLHPTSEELSIGSMRFTTF 298
W ++ K +GL NAGKT+L++++ ++ +PT+ +++ G++ +
Sbjct: 10 WLRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVTIKLW 69
Query: 299 DLGG 310
DLGG
Sbjct: 70 DLGG 73
>At5g52210.2 68418.m06481 ADP-ribosylation factor, putative similar
to arf-related protein (ARP) (SP:Q63055){Rattus
norvegicus}; contains Pfam domain PF00025:
ADP-ribosylation factor family
Length = 205
Score = 32.3 bits (70), Expect = 0.070
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Frame = +2
Query: 122 WDFLVYGKSRASSWFLGLDNAGKTTLLHMLK-----DDRLAQH--VPTLHPTSEELSIGS 280
W ++ + K+ + LG+D AGKTT L LK + L VPT+ + + +
Sbjct: 9 WSYM-FSKTEFNVLILGIDKAGKTTFLEKLKTIYSISEGLPHDRIVPTVGLNIGRIEVSN 67
Query: 281 MRFTTFDLGG 310
+ +DLGG
Sbjct: 68 AKIVFWDLGG 77
>At5g52210.1 68418.m06480 ADP-ribosylation factor, putative similar
to arf-related protein (ARP) (SP:Q63055){Rattus
norvegicus}; contains Pfam domain PF00025:
ADP-ribosylation factor family
Length = 205
Score = 32.3 bits (70), Expect = 0.070
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Frame = +2
Query: 122 WDFLVYGKSRASSWFLGLDNAGKTTLLHMLK-----DDRLAQH--VPTLHPTSEELSIGS 280
W ++ + K+ + LG+D AGKTT L LK + L VPT+ + + +
Sbjct: 9 WSYM-FSKTEFNVLILGIDKAGKTTFLEKLKTIYSISEGLPHDRIVPTVGLNIGRIEVSN 67
Query: 281 MRFTTFDLGG 310
+ +DLGG
Sbjct: 68 AKIVFWDLGG 77
>At5g45730.1 68418.m05622 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 519
Score = 28.7 bits (61), Expect = 0.87
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 98 SSTGSLECWDFLVYGKSRASSWFLGLDNAGKTTLLHML 211
SS G L W + GK+ AS W+ G D G T + +L
Sbjct: 447 SSNGQL--WCDICEGKTDASVWYYGCDECGVTLHIEVL 482
>At2g18390.1 68415.m02142 ADP-ribosylation factor-like protein 2
(ARL2) identical to ARL2 G-protein (Halimasch; HAL;
TITAN5) GI:20514265 from [Arabidopsis thaliana];
identical to cDNA ARL2 G-protein mRNA GI:20514264;
contains Pfam profile PF00025: ADP-ribosylation factor
family; contains TIGRfam profile TIGR00231: small
GTP-binding protein domain
Length = 185
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 167 LGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 310
+GLDN+GKTT++ + + + PTL + + +D+GG
Sbjct: 22 VGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTIIYQKYTLNIWDVGG 69
>At3g57180.1 68416.m06366 expressed protein
Length = 644
Score = 27.5 bits (58), Expect = 2.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 149 RASSWFLGLDNAGKTTLLHML 211
R + W +G NAGK+TL++ L
Sbjct: 376 RGNVWVIGAQNAGKSTLINAL 396
>At1g23120.1 68414.m02890 major latex protein-related / MLP-related
low similarity to major latex protein {Papaver
somniferum}[GI:294060]; Location of EST gb|T88564 ;
contains Pfam profile PF00407: Pathogenesis-related
protein Bet v I family
Length = 148
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 98 SSTGSLECWDFLVYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQH 235
+S S++ W+F+V GK + +D K+ L+ D L Q+
Sbjct: 46 TSNSSIQIWNFIVDGKMEQIKEKIDVDEENKSVSFLALEGDVLKQY 91
>At1g07620.1 68414.m00817 GTP1/OBG family protein similar to SP|P20964
Spo0B-associated GTP-binding protein {Bacillus subtilis};
contains Pfam profile PF01018: GTP1/OBG family
Length = 1016
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +2
Query: 143 KSRASSWFLGLDNAGKTTLLHMLK--DDRLAQHV-PTLHPTSEELSIGSMRFTTFDLGG 310
KS A +G+ NAGK+TLL L R+ + TL P ++ T D+ G
Sbjct: 824 KSIADVGLVGMPNAGKSTLLGALSRAKPRVGHYAFTTLRPNLGNVNYDDFSMTVADIPG 882
>At3g11430.1 68416.m01394 phospholipid/glycerol acyltransferase
family protein contains Pfam profile: PF01553
acyltransferase
Length = 502
Score = 26.6 bits (56), Expect = 3.5
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 77 NYIQKCLSSTGSLECWDFLVYGKSRASSWFLGLDNAGKTTLLHMLKDDRLAQHVPTLHP 253
NY+Q+ L++T EC +F +R + + N G + L +L D+L + V T P
Sbjct: 448 NYVQRILAATLGFECTNF-----TRKDKYRVLAGNDGTVSYLSLL--DQLKKVVSTFEP 499
>At5g18490.1 68418.m02181 expressed protein
Length = 553
Score = 25.8 bits (54), Expect = 6.1
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 56 VINIVQFNYIQKCLSSTGSLECWDF 130
V+ + +F+ + KC +S G L C F
Sbjct: 52 VVKVTEFDRVWKCGTSRGKLRCASF 76
>At5g41840.1 68418.m05095 F-box family protein contains F-box domain
Pfam:PF00646
Length = 540
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 294 VVKRILPIDSSSDVGCKVGTC*ASLSSFNICKSVVF 187
V+ ++ DSS D C V +L N C+S F
Sbjct: 211 VLANLMWADSSEDEACHVSVSIPTLKRLNFCRSEDF 246
>At5g11580.1 68418.m01350 UVB-resistance protein-related / regulator
of chromosome condensation (RCC1) family protein
contains Pfam PF00415 : Regulator of chromosome
condensation (RCC1); similar to rjs protein (GI:3414809)
[Mus musculus]; similar to HERC2 (GI:4079809) [Homo
sapiens];similar to UVB-resistance protein UVR8
(GI:10177674) {Arabidopsis thaliana}
Length = 553
Score = 25.4 bits (53), Expect = 8.1
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = +2
Query: 56 VINIVQFNYIQKCLSSTGSLECWDFLVYGK 145
++ + Y +S GS+ CW + +YG+
Sbjct: 75 IVGVAAGAYHSLAVSDDGSVWCWGYNIYGQ 104
>At4g05540.1 68417.m00843 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 689
Score = 25.4 bits (53), Expect = 8.1
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 167 LGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSE 262
+G+D G LL++ DDR+++ P++E
Sbjct: 207 MGIDERGNDDLLNVFLDDRISKLGELFSPSNE 238
>At2g41700.1 68415.m05151 ABC transporter family protein similar to
ATP-binding cassette transporter ABCA1 GI:18031705 from
[Arabidopsis thaliana]
Length = 1822
Score = 25.4 bits (53), Expect = 8.1
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 164 FLGLDNAGKTTLLHMLKDD 220
FLG + AGKTT L ML +
Sbjct: 1429 FLGTNGAGKTTTLSMLSGE 1447
>At1g74450.1 68414.m08625 expressed protein
Length = 397
Score = 25.4 bits (53), Expect = 8.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 102 RLVHWSVGISWSMEKVGQALG 164
R + WSV SWS K QA+G
Sbjct: 210 RSLSWSVSRSWSASKQLQAIG 230
>At1g61460.1 68414.m06925 S-locus protein kinase, putative contains
similarity to KI domain interacting kinase 1 [Zea mays]
gi|2735017|gb|AAB93834; contains S-locus glycoprotein
family domain, Pfam:PF00954
Length = 598
Score = 25.4 bits (53), Expect = 8.1
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -1
Query: 191 SSLHCQVPETKSLPDFFHRPRNPNTP 114
+ LHCQ TK +FFH N P
Sbjct: 144 TKLHCQENSTKKDANFFHPVANIKPP 169
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,251,917
Number of Sequences: 28952
Number of extensions: 115470
Number of successful extensions: 417
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of database: 12,070,560
effective HSP length: 70
effective length of database: 10,043,920
effective search space used: 331449360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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