Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0507
         (423 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...   138   2e-35
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   2.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   3.7  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   4.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   8.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    20   8.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    20   8.6  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score =  138 bits (334), Expect = 2e-35
 Identities = 68/90 (75%), Positives = 78/90 (86%), Gaps = 1/90 (1%)
 Frame = -2

Query: 422 VETLRQKAEADKNDKAVKDLVILLYETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEDE 243
           ++ LRQKAEADKNDKAVKDLVILL+ETALLSSGFTLDEPQVHASRIYRMIKLGLGIDE+E
Sbjct: 632 LKNLRQKAEADKNDKAVKDLVILLFETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEEE 691

Query: 242 PIQVEEPASGDVPPLE-GDADDASRMEEVD 156
            +  E+   GD P  +  +++DASRMEEVD
Sbjct: 692 AMITEDAQGGDAPSADAAESEDASRMEEVD 721


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -3

Query: 274 SNWVLVLMKMSRFRLKSLLLEMCRH 200
           SNW +    + R+  + L +++C H
Sbjct: 29  SNWAIYRPGIGRYAQEDLPVDLCTH 53


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = -3

Query: 274 SNWVLVLMKMSRFRLKSLLLEMCRH 200
           +NW    +K+ +F  + ++ ++C H
Sbjct: 94  TNWSQYRVKIGKFTPEHIIPDLCTH 118


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +3

Query: 297 MDLGLIKREA 326
           +DLG+IKREA
Sbjct: 329 LDLGVIKREA 338



 Score = 20.6 bits (41), Expect = 6.5
 Identities = 7/30 (23%), Positives = 14/30 (46%)
 Frame = +3

Query: 63  GIFELNQSLAVHRCTKTNHYDMVPTVKVEI 152
           G  E+N S  +  C K  H +    ++ ++
Sbjct: 231 GHIEVNHSAPITTCNKKQHLESPSALQAKV 260


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 9/39 (23%), Positives = 17/39 (43%)
 Frame = -3

Query: 316  LMSPKSMLPVSIE*SNWVLVLMKMSRFRLKSLLLEMCRH 200
            L+ PKS   V    +NW      + ++    +  ++C H
Sbjct: 1816 LVDPKSEFKVVCYFTNWAWYRQGVGKYLPSDIDPDLCTH 1854


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +3

Query: 174 RCIIGITLQWRHISRSRLFNLNRLIFINTKTQFDHSI 284
           RC+ GI +  + ++    +     +FI T T  +H I
Sbjct: 138 RCVNGIPVSSKTLASQSAYVQQDDLFIGTLTVKEHLI 174


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +3

Query: 174 RCIIGITLQWRHISRSRLFNLNRLIFINTKTQFDHSI 284
           RC+ GI +  + ++    +     +FI T T  +H I
Sbjct: 138 RCVNGIPVSSKTLASQSAYVQQDDLFIGTLTVKEHLI 174


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,370
Number of Sequences: 336
Number of extensions: 1637
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9384961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)