Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0500
         (541 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.            37   0.052
BT007225-1|AAP35889.1|  382|Homo sapiens protein kinase, cAMP-de...    32   1.5  
BC002763-1|AAH02763.1|  382|Homo sapiens PRKAR2A protein protein.      32   1.5  
AK055204-1|BAB70873.1|  811|Homo sapiens protein ( Homo sapiens ...    30   6.0  
AF007192-1|AAC02270.1|  338|Homo sapiens intestinal mucin protein.     29   7.9  

>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
          Length = 4061

 Score = 36.7 bits (81), Expect = 0.052
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
 Frame = +1

Query: 10   RHEDDPRFRTVEAGPTLGHYWKSGKEIENTEDYVEEVYDAS-QYHGQDGLGAYAYGYQTP 186
            RH   PR +   A    GH+  SG +  ++E + EE    S   HGQD  G +   +Q  
Sbjct: 1045 RHSGIPRRQASSAVRDSGHWGSSGSQASDSEGHSEESDTQSVSGHGQD--GPHQQSHQ-- 1100

Query: 187  ESAKVENRVRSGDVTGSYIYK 249
            ESA+  +  RSG  +GS+IY+
Sbjct: 1101 ESARDWSGGRSGR-SGSFIYQ 1120


>BT007225-1|AAP35889.1|  382|Homo sapiens protein kinase,
           cAMP-dependent, regulatory, type II, alpha protein.
          Length = 382

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 16/42 (38%), Positives = 27/42 (64%)
 Frame = +1

Query: 187 ESAKVENRVRSGDVTGSYIYKDGKNDLIKVRYWSDRDGFHQE 312
           +S +V  R++  DV G  IYKDG+  + + +  S++DG +QE
Sbjct: 263 KSLEVSERMKIVDVIGEKIYKDGERIITQTK--SNKDGGNQE 302


>BC002763-1|AAH02763.1|  382|Homo sapiens PRKAR2A protein protein.
          Length = 382

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 16/42 (38%), Positives = 27/42 (64%)
 Frame = +1

Query: 187 ESAKVENRVRSGDVTGSYIYKDGKNDLIKVRYWSDRDGFHQE 312
           +S +V  R++  DV G  IYKDG+  + + +  S++DG +QE
Sbjct: 263 KSLEVSERMKIVDVIGEKIYKDGERIITQTK--SNKDGGNQE 302


>AK055204-1|BAB70873.1|  811|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30642 fis, clone CTONG2002965. ).
          Length = 811

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 18/66 (27%), Positives = 27/66 (40%)
 Frame = +1

Query: 52  PTLGHYWKSGKEIENTEDYVEEVYDASQYHGQDGLGAYAYGYQTPESAKVENRVRSGDVT 231
           PTL H  KS       E Y+ +  +A+       LG    GY  PE+ K         ++
Sbjct: 482 PTLEHTTKSFLRNWRIESYLNDHSEATPDSNGSALGDRFEGYDNPENLKANALYTHSRLS 541

Query: 232 GSYIYK 249
            S ++K
Sbjct: 542 SSLVFK 547


>AF007192-1|AAC02270.1|  338|Homo sapiens intestinal mucin protein.
          Length = 338

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +2

Query: 200 SKIASDPETSPARISTRTAKTISSRYVTGQTVTVSTRKTTYLRSS 334
           S   S P TSP   +T TAKT ++  VT  T T S   T++  S+
Sbjct: 263 SSATSLPLTSPLVSTTETAKTPTTILVTTTTKTTSHSTTSFTSST 307


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.311    0.132    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,147,366
Number of Sequences: 237096
Number of extensions: 1500372
Number of successful extensions: 6726
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6726
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)