Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0497
         (620 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   3.2  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   7.3  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   9.7  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = +2

Query: 239 KWLLKRSPARV--GATISELNTPIQTPKDMVFSQTSLKTRNILKVVD 373
           K +LKRS      GA+  +       PK+ V +   LK+  + KVVD
Sbjct: 8   KQILKRSAESEFEGASSPKKRNKNPQPKNAVCALNELKSGAVYKVVD 54


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 132 IHSLYSGLLSGQLVV 176
           I+ LY GLLSG +++
Sbjct: 126 IYHLYMGLLSGGIIL 140


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +2

Query: 446 GVMPQGTVPTASFSEEYLKPEQLYASTMLHGSNSEFFQELD 568
           G+MP G+   +   E   +     +S+  HGS S   +++D
Sbjct: 377 GLMPSGSSVHSDSGENNSRGHSGQSSSHHHGSKSWTQEDMD 417


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,892
Number of Sequences: 438
Number of extensions: 3132
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)