Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0495
(587 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59794| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_25244| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_18209| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 37 0.011
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 37 0.011
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 37 0.011
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 37 0.011
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 37 0.011
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 37 0.011
SB_18079| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 37 0.011
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 37 0.011
SB_34518| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.043
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.057
SB_15948| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_492| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_12062| Best HMM Match : NUC129 (HMM E-Value=9.2) 29 2.1
SB_51316| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_50608| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_34251| Best HMM Match : FA_hydroxylase (HMM E-Value=5.5) 29 3.7
SB_24390| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_42465| Best HMM Match : 2-oxoacid_dh (HMM E-Value=0) 28 6.5
SB_33647| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_59794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = -2
Query: 160 DVVAVSQAPSPESNPDSPLPVTTM 89
DVVAVSQAPSPESNP+SP PV TM
Sbjct: 105 DVVAVSQAPSPESNPNSPSPVVTM 128
>SB_25244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2
Query: 151 AVSQAPSPESNPDSPLPVTTM 89
AVSQAPSPESNP+SP PV TM
Sbjct: 52 AVSQAPSPESNPNSPSPVVTM 72
>SB_18209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +3
Query: 234 TLTRPRNRNEYTLNILTRNNWRASLXXXXXXXXXXXXYTKIVAVKKLVVAFVRRAVGAP 410
T + R ++++ R +WRASL Y K+VAVKKLVV F VG P
Sbjct: 44 TCQQTTTRVHAAMHLVIRIHWRASLVPAAAVIPAPIAYIKVVAVKKLVVGFRDGTVGPP 102
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 539 YSDCAFMVDNEAIYDI 586
+SDCAFMVDNEAIYDI
Sbjct: 187 HSDCAFMVDNEAIYDI 202
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 539 YSDCAFMVDNEAIYDI 586
+SDCAFMVDNEAIYDI
Sbjct: 328 HSDCAFMVDNEAIYDI 343
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 539 YSDCAFMVDNEAIYDI 586
+SDCAFMVDNEAIYDI
Sbjct: 134 HSDCAFMVDNEAIYDI 149
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 539 YSDCAFMVDNEAIYDI 586
+SDCAFMVDNEAIYDI
Sbjct: 196 HSDCAFMVDNEAIYDI 211
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 539 YSDCAFMVDNEAIYDI 586
+SDCAFMVDNEAIYDI
Sbjct: 568 HSDCAFMVDNEAIYDI 583
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 539 YSDCAFMVDNEAIYDI 586
+SDCAFMVDNEAIYDI
Sbjct: 1001 HSDCAFMVDNEAIYDI 1016
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 539 YSDCAFMVDNEAIYDI 586
+SDCAFMVDNEAIYDI
Sbjct: 197 HSDCAFMVDNEAIYDI 212
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 539 YSDCAFMVDNEAIYDI 586
+SDCAFMVDNEAIYDI
Sbjct: 182 HSDCAFMVDNEAIYDI 197
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 539 YSDCAFMVDNEAIYDI 586
+SDCAFMVDNEAIYDI
Sbjct: 615 HSDCAFMVDNEAIYDI 630
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 539 YSDCAFMVDNEAIYDI 586
+SDCAFMVDNEAIYDI
Sbjct: 162 HSDCAFMVDNEAIYDI 177
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 539 YSDCAFMVDNEAIYDI 586
+SDCAFMVDNEAIYDI
Sbjct: 197 HSDCAFMVDNEAIYDI 212
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 539 YSDCAFMVDNEAIYDI 586
+SDCAFMVDNEAIYDI
Sbjct: 630 HSDCAFMVDNEAIYDI 645
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 539 YSDCAFMVDNEAIYDI 586
+SDCAFMVDNEAIYDI
Sbjct: 261 HSDCAFMVDNEAIYDI 276
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 539 YSDCAFMVDNEAIYDI 586
+SDCAFMVDNEAIYDI
Sbjct: 782 HSDCAFMVDNEAIYDI 797
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 539 YSDCAFMVDNEAIYDI 586
+SDCAFMVDNEAIYDI
Sbjct: 72 HSDCAFMVDNEAIYDI 87
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 539 YSDCAFMVDNEAIYDI 586
+SDCAFMVDNEAIYDI
Sbjct: 122 HSDCAFMVDNEAIYDI 137
>SB_18079| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/42 (47%), Positives = 22/42 (52%)
Frame = +3
Query: 285 RNNWRASLXXXXXXXXXXXXYTKIVAVKKLVVAFVRRAVGAP 410
R +WRASL Y K+VAVKKLVV F VG P
Sbjct: 14 RIHWRASLVPAAAVIPAPIAYIKVVAVKKLVVGFRDGTVGPP 55
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 539 YSDCAFMVDNEAIYDI 586
+SDCAFMVDNEAIYDI
Sbjct: 122 HSDCAFMVDNEAIYDI 137
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +2
Query: 539 YSDCAFMVDNEAIYDI 586
+SDCAFMVDNEAIYDI
Sbjct: 197 HSDCAFMVDNEAIYDI 212
>SB_34518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 35.1 bits (77), Expect = 0.043
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -3
Query: 150 PFLRLPLRNRTLIPRYP 100
PFLRLPLRNRTLI R+P
Sbjct: 224 PFLRLPLRNRTLILRHP 240
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 34.7 bits (76), Expect = 0.057
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +2
Query: 539 YSDCAFMVDNEAIYDI 586
+SDC FMVDNEAIYD+
Sbjct: 1108 HSDCTFMVDNEAIYDL 1123
>SB_15948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.53
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = +3
Query: 297 RASLXXXXXXXXXXXXYTKIVAVKKLVVAFVRRAVGAP 410
RASL Y K+VAVKKLVV F VG P
Sbjct: 5 RASLVPAAAVIPAPIAYIKVVAVKKLVVGFRDGTVGPP 42
>SB_492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +3
Query: 285 RNNWRASLXXXXXXXXXXXXYTKIVAVKKLVVAFVRRAVGAP 410
R ASL Y K+VAVKKLVV F VG P
Sbjct: 24 RERRAASLVPAAAVIPAPIAYIKVVAVKKLVVGFRDGTVGPP 65
>SB_12062| Best HMM Match : NUC129 (HMM E-Value=9.2)
Length = 111
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3
Query: 345 YTKIVAVKKLVVAFVRRAVGAP 410
Y K+VAVKKLVV F VG P
Sbjct: 88 YIKVVAVKKLVVGFRDGTVGPP 109
>SB_51316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3
Query: 345 YTKIVAVKKLVVAFVRRAVGAP 410
Y K+VAVKKLVV F VG P
Sbjct: 89 YIKVVAVKKLVVGFRDGTVGPP 110
>SB_50608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3
Query: 345 YTKIVAVKKLVVAFVRRAVGAP 410
Y K+VAVKKLVV F VG P
Sbjct: 17 YIKVVAVKKLVVGFRDGTVGPP 38
>SB_34251| Best HMM Match : FA_hydroxylase (HMM E-Value=5.5)
Length = 203
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 383 CNYELFNRNNFSIRYWSWNYRGCWH 309
C + RN +RYW W R C H
Sbjct: 91 CEVTVIARNILPVRYWIWLSRKCGH 115
>SB_24390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -1
Query: 446 ICSANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYW-SWNY 324
I S S R+RCT S + KC + + F W S+NY
Sbjct: 139 ISSGYYGRSYRLRCTSSTSWKCRLTSISESYFKGNNWFSYNY 180
>SB_42465| Best HMM Match : 2-oxoacid_dh (HMM E-Value=0)
Length = 441
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 169 PSLDVVAVSQAPSPESNPDSPLP 101
P+ DV+A Q P P S D PLP
Sbjct: 75 PAEDVMAAHQEPKPTSAIDQPLP 97
>SB_33647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 112 NQGSIPEREPEKRLPHPRKAAGAQIT-HSRHG-EVVTKNNDTGLLRGLVIGMSTL 270
N+ +IP+RE E R AAGA I H +H K+ G R L +G L
Sbjct: 10 NEKTIPQREVE-RTKKAATAAGASIAEHIKHAIAEQVKHAKPGFSRSLTLGQKLL 63
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,115,833
Number of Sequences: 59808
Number of extensions: 407533
Number of successful extensions: 1152
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1422302661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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