Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0494
(543 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55495| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_33129| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_19779| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_5737| Best HMM Match : DED (HMM E-Value=2.9e-18) 28 4.3
SB_59428| Best HMM Match : Ank (HMM E-Value=2.2) 28 5.7
SB_32196| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_28895| Best HMM Match : p450 (HMM E-Value=0) 27 7.5
SB_43071| Best HMM Match : 7tm_1 (HMM E-Value=0.015) 27 9.9
SB_21559| Best HMM Match : Hormone_4 (HMM E-Value=1.3) 27 9.9
SB_12434| Best HMM Match : SAB (HMM E-Value=4.6) 27 9.9
>SB_55495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 858
Score = 58.8 bits (136), Expect = 3e-09
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Frame = +1
Query: 193 QALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSESDIEAILNSIVSIMV 372
+A E+R + K GA++ EE S ++D+L +I+ C CFKE ++++E+++NSI+S+++
Sbjct: 49 KAQEIRTFLKEQGADLKEE-SITPLQDELAEILECCQVCFKE--DAELESVMNSILSLVL 105
Query: 373 SIPLERGENLILAFSQRLTKAPGPKLGMVA---LQSLWRLYNNLEPNSPLRYHVY 528
+P +R E LI +L A L+ L L++ L P+R+ VY
Sbjct: 106 VVPEKRNE-LIKKCCDKLKANMSEDENSSAAARLRVLSVLFSGLPEKDPMRHEVY 159
>SB_33129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 381 WYRNHNRDNTVQNGFDVRFTRLFETSITNPNDLMQII-LNAL 259
WY R N V+NGFD+ + ++T+P ++ LN++
Sbjct: 72 WY-GRRRQNCVRNGFDITVLTRYSEAVTHPRTYRALLSLNSV 112
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +1
Query: 187 EDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSESDIEAILNSIVSI 366
+D ELR SLGA + +E L ++ G+C+ E + E + N V +
Sbjct: 2973 DDMITELRNAEISLGASLMGTPDLDQLESQLEEVKGLCED--MEGKQELFENLKNKGVDM 3030
Query: 367 MVSIPLE 387
M IP E
Sbjct: 3031 MEKIPEE 3037
>SB_19779| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = +1
Query: 88 LAFTLMLIIINKRIQFKKGIKM----QGPAVFMDISXEDQALELRRYFKSLGAEISEEKS 255
L+ +L LI+ + + QF+ I++ P F + ED + R + ++ ++ +++ S
Sbjct: 98 LSISLNLIVRDLKQQFQSLIRVVLFTNAPENFNSL-VEDYYCQAFRAYSTVHSQKNKDSS 156
Query: 256 PKGIEDDLHKIVGVCDACFKEPSESDIEAIL 348
DD ++ VC C KE + + IL
Sbjct: 157 MNDGSDDEDEVSLVCPGCAKESEDCGCKQIL 187
>SB_5737| Best HMM Match : DED (HMM E-Value=2.9e-18)
Length = 1719
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +1
Query: 310 FKEPSESDIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYN 489
FKE ++ I ++ IV + V + E+G L + + + S RL+
Sbjct: 1307 FKESGKASIPSVNREIVRVWVDLCSEKGVPLEREAEEMIRLLDESLKHRSRIDSTMRLWM 1366
Query: 490 NLEPNSPLRYHV 525
+ P+ P+ HV
Sbjct: 1367 KIAPHVPVEIHV 1378
>SB_59428| Best HMM Match : Ank (HMM E-Value=2.2)
Length = 351
Score = 27.9 bits (59), Expect = 5.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 499 PNSPLRYHVYYHVIE 543
P+ PL YH +YHVI+
Sbjct: 288 PDDPLDYHFFYHVID 302
>SB_32196| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -1
Query: 372 NHNR-DNTVQNGFDVRFTRLFETSITNPND 286
NHNR +N + D+R TR + ++ NP D
Sbjct: 613 NHNRAENNEEKKLDLRSTRELQGAVLNPRD 642
>SB_28895| Best HMM Match : p450 (HMM E-Value=0)
Length = 492
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 205 LRRYFKSLGAEISEEKSPKGIEDDLHKIVGV 297
LR+YF SLG I++E + +ED L+ VGV
Sbjct: 134 LRKYFPSLGDTIAKELAK--LEDKLNSDVGV 162
>SB_43071| Best HMM Match : 7tm_1 (HMM E-Value=0.015)
Length = 261
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 284 RSLGFVMLVSKSRVNRTSKPF*TVLSLLWFLY 379
R L ++ LV+KS+ P+ + LW+LY
Sbjct: 163 RPLRYITLVTKSKAYTAIMPYFPAVVTLWYLY 194
>SB_21559| Best HMM Match : Hormone_4 (HMM E-Value=1.3)
Length = 95
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -2
Query: 353 LFRMASMSDSLGSLKQASQTPTILCRSSSMPLGDFSSEISA 231
L RM D L + + ++ C+ + P GDF E++A
Sbjct: 40 LSRMLQYGDGLTEVLELWTRFSVFCQGQNCPRGDFEKEMNA 80
>SB_12434| Best HMM Match : SAB (HMM E-Value=4.6)
Length = 160
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = -2
Query: 95 NAKNDFLATKCGK--RYDPRAEFLQPG 21
+AKND L+++ K R+ R EFLQPG
Sbjct: 17 HAKNDALSSENNKTVRHHGRIEFLQPG 43
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,870,365
Number of Sequences: 59808
Number of extensions: 295719
Number of successful extensions: 831
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1239956166
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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