Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0492
(536 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0039 - 319871-319914,320021-320084,320198-320263,320397-32... 41 5e-04
11_01_0040 - 304439-304482,304589-304652,304766-304831,305509-30... 40 0.001
11_06_0653 + 25911162-25911272,25911648-25911694,25912877-259133... 36 0.015
03_06_0642 + 35239658-35240083,35240167-35240238,35240305-352409... 29 1.8
07_03_0524 - 19037638-19038294 29 2.3
11_06_0656 + 25926192-25926289,25927530-25927659,25928248-259282... 29 3.1
04_04_0981 + 29912275-29912814 28 4.1
04_04_1200 + 31690611-31690914,31690993-31691293,31691391-31696251 28 5.4
05_07_0196 + 28352320-28352522,28352679-28352808,28353774-283538... 27 7.2
04_04_1250 + 32077590-32078000,32078132-32078308,32078437-320785... 27 7.2
12_02_0626 - 21344530-21344986,21346132-21346469,21347300-213473... 27 9.5
08_02_1322 + 26131395-26131599,26132382-26132468,26133119-261333... 27 9.5
07_01_0718 + 5484553-5484601,5484836-5484933,5485028-5485078,548... 27 9.5
03_02_0235 + 6644083-6644125,6645218-6645315,6645448-6645498,664... 27 9.5
01_06_1580 - 38406740-38407257,38407481-38407552,38408309-384083... 27 9.5
01_05_0740 - 24809951-24810394,24810622-24810700,24811651-248118... 27 9.5
>12_01_0039 -
319871-319914,320021-320084,320198-320263,320397-320458,
321211-321298,321401-321461,321542-321625,322332-322630
Length = 255
Score = 41.1 bits (92), Expect = 5e-04
Identities = 28/103 (27%), Positives = 50/103 (48%)
Frame = +2
Query: 227 SYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKG 406
SY Y +YF+ +GFAK F++ SD+ + L+K+ RGG++ S T
Sbjct: 106 SYAYHSLFAYFDRDNVALKGFAKFFKESSDEERDHAEKLMKYQNMRGGRVRLQSIVTPLT 165
Query: 407 DKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSD 535
+ E G + A+ AL +K + E++ +H ++ +D
Sbjct: 166 EFDH---PEKGDALYAMELALALEKLVNEKLHNLHSVASRCND 205
>11_01_0040 -
304439-304482,304589-304652,304766-304831,305509-305640,
305744-305804,305885-306018,306310-306654
Length = 281
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +2
Query: 203 LASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDF 382
L S+ SY Y +YF+ +GFAK F++ SD+ + LIK+ RGG++
Sbjct: 130 LCSVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEERDHAEKLIKYQNMRGGRVRL 189
Query: 383 SSHTT 397
S T
Sbjct: 190 QSIVT 194
>11_06_0653 +
25911162-25911272,25911648-25911694,25912877-25913355,
25914089-25914249,25914324-25914519,25914745-25914807,
25914898-25915047,25915148-25915494
Length = 517
Score = 36.3 bits (80), Expect = 0.015
Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 7/111 (6%)
Frame = +2
Query: 59 LALGVLAEEDSCDQNVDQGCRRTLSLPHCSAYYGQFKDNHVVANELKALASLYLKRSYHY 238
L LGV+A ++ Q + +G + ++ Y + N + + L + + H
Sbjct: 181 LKLGVMAADERISQRIQEGITESFAVKDVRGYSTKKNLNPSPCDPVYKLNKIAMNGDRHK 240
Query: 239 LLSAS-------YFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGG 370
LL + + + Y + E K+ K+SD WE I + T R G
Sbjct: 241 LLEKNGIKTVGDFLSFYDRSPEDLRKILGKISDQDWETIISHAQKCTPRPG 291
>03_06_0642 +
35239658-35240083,35240167-35240238,35240305-35240919,
35241253-35241435,35241604-35241663,35241733-35241936,
35242497-35242745,35243609-35243707,35243760-35243858,
35244463-35244480,35244668-35244862,35244981-35245073,
35245265-35245531,35245884-35246102
Length = 932
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 2 SGSPGLQANMKVYALIVACLALGVLAEEDSCDQNVDQGCRRTLSL 136
SGSP + A++K ++ A A+ VLAEE + DQ+ + R LSL
Sbjct: 421 SGSPLILADLKKVSVSKA-RAIVVLAEEGNADQSDARALRTVLSL 464
>07_03_0524 - 19037638-19038294
Length = 218
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/52 (30%), Positives = 21/52 (40%)
Frame = -1
Query: 203 MPSVRSLQRGCP*IGRNTRCSAADLKSVCILGRRSDRMSLPRPAHPEPDRQR 48
MPS+ G + R + GR + R S P P HP PD +R
Sbjct: 1 MPSMMVRSAGIKRLRREMESRRRRSPELAPTGRVAKRSSTPPPLHPSPDDER 52
>11_06_0656 +
25926192-25926289,25927530-25927659,25928248-25928294,
25929274-25929388,25929504-25929753,25930079-25930239,
25930372-25930567,25930672-25930836,25930918-25931070,
25931160-25931248,25931385-25931423,25931460-25931681,
25933503-25934165
Length = 775
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/98 (18%), Positives = 40/98 (40%), Gaps = 7/98 (7%)
Frame = +2
Query: 65 LGVLAEEDSCDQNVDQGCRRTLSLPHCSAYYGQFKDNHVVANELKALASLYLKRSYHYLL 244
LGV+A ++ + + +G + ++ Y + N + + L+ + H LL
Sbjct: 184 LGVMAADERISERIQEGITESFAVKDVRGYLTKKNPNPSPRDAVYKLSKIAKNGDRHKLL 243
Query: 245 SAS-------YFNNYQTNREGFAKLFRKLSDDSWEKTI 337
+ + + Y + + K+ K+SD W+ I
Sbjct: 244 EQNGIKTVEDFLSFYNKSPDDLRKILGKISDQDWDLII 281
>04_04_0981 + 29912275-29912814
Length = 179
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +1
Query: 34 GVCSHRCLSGSGCAGRGRLMRSER---RPRMQTDFKSAALQRVLRPIQGQPRCSERTEGI 204
G+ S +G G GRG ++R ER R F+ A RV+ G R+ +
Sbjct: 79 GLRSRSVAAGGGGGGRGIVVRDERPKSRAFGWVSFRKATSDRVVEVDDG--AALARSSSV 136
Query: 205 SLTVFETFLP 234
S T ET P
Sbjct: 137 SATAVETRAP 146
>04_04_1200 + 31690611-31690914,31690993-31691293,31691391-31696251
Length = 1821
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 22 GKYEGVCSHRCLSGSGCAGRGRLMRS 99
G G+ +HRCLSG G GR L +S
Sbjct: 1380 GNLRGLLAHRCLSGHGEDGRCILPQS 1405
>05_07_0196 +
28352320-28352522,28352679-28352808,28353774-28353851,
28355562-28355664,28356109-28356302,28356501-28356518
Length = 241
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/39 (28%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Frame = +1
Query: 220 ETFLPLSPVGLLLQQLPDEQGRI----REALQEIIGRFV 324
+ FLP++ +G ++++ E G+I +E++QE + F+
Sbjct: 24 DRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFI 62
>04_04_1250 +
32077590-32078000,32078132-32078308,32078437-32078561,
32078629-32078761,32078866-32079015,32079105-32079158,
32079437-32079532,32080021-32080095,32080723-32080824,
32080903-32081589,32081686-32081817,32081916-32082023,
32082170-32082319
Length = 799
Score = 27.5 bits (58), Expect = 7.2
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +1
Query: 130 KSAALQRVLRPIQGQPRCSERTEGISLTVFETFL--PLSPVGLLLQQLP--DEQGRIREA 297
K A LQRV+R ++ Q R S G + T+L P L +L +E+ +R
Sbjct: 295 KKAKLQRVIRSMKRQQRKSTEDTGSNYYSPLTYLKDPQGFAEKLFSRLQKCNERFEVRMM 354
Query: 298 LQEIIGRFVGENH 336
+ ++I R +G +H
Sbjct: 355 MLKVIARTIGLHH 367
>12_02_0626 -
21344530-21344986,21346132-21346469,21347300-21347338,
21347572-21347629,21349854-21350136,21350404-21350766,
21350768-21350840
Length = 536
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +1
Query: 49 RCLSGSGCAGRGRLMRSERRPRMQTDFKSAALQRVLRPIQGQPRCSERTEG 201
+ ++G G +GRG ++ + PR + +A +R L +G +C + G
Sbjct: 87 KAVTGGGRSGRGLVVCCQMAPRRGGGERRSAQRRRLERRKGGDQCDDELSG 137
>08_02_1322 +
26131395-26131599,26132382-26132468,26133119-26133372,
26133430-26133526,26133613-26133693,26133782-26133976,
26134093-26134182,26134296-26134471,26134565-26134687,
26134799-26134945,26135027-26135163,26135247-26135364,
26135462-26135518
Length = 588
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 392 TTLKGDKGSNYTVEVGHEIGALAKALDTQKQLAERI 499
T + +G+ +TV+ G ALAKA+ T K+ AE++
Sbjct: 200 TVISKSEGAEFTVKDGFFCPALAKAVKTMKK-AEKV 234
>07_01_0718 +
5484553-5484601,5484836-5484933,5485028-5485078,
5485744-5485857,5485887-5485937,5485938-5486138,
5486240-5486341,5486879-5486986,5487053-5487286,
5488250-5488500,5488592-5488763,5489165-5489320,
5489405-5489455,5489499-5489591,5489814-5490014,
5490105-5490236,5490308-5490481,5490755-5490994,
5491213-5491407
Length = 890
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -2
Query: 184 YNVVVLELAVIRAAVRQT*SPSASLVDVLIA*VFLGQHTQSQTGNDE 44
YN V+LE A +RA+ T + +LVD L +F+ G+DE
Sbjct: 500 YNRVILENATVRASAVSTLAKFGALVDSLKPRIFVLLRRCLFDGDDE 546
>03_02_0235 +
6644083-6644125,6645218-6645315,6645448-6645498,
6645573-6645686,6645771-6645971,6646047-6646148,
6647245-6647352,6647745-6647995,6648108-6648279,
6648341-6648397,6648555-6648710,6648807-6648857,
6649053-6649193,6649270-6649464,6649534-6649665,
6649768-6649941,6650396-6650635,6650761-6650955
Length = 826
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -2
Query: 184 YNVVVLELAVIRAAVRQT*SPSASLVDVLIA*VFL 80
YN V+LE A +RA+ T + +LVD L +F+
Sbjct: 422 YNRVILENATVRASAVSTLAKFGALVDALKPRIFV 456
>01_06_1580 -
38406740-38407257,38407481-38407552,38408309-38408365,
38408476-38408532,38408643-38408699,38408809-38408865,
38409371-38409424,38409744-38409800,38410023-38410076,
38412208-38412220,38413530-38413580,38414134-38414193,
38414640-38414761,38415033-38415894,38416468-38416667,
38417159-38417238,38417525-38417619
Length = 821
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -1
Query: 161 GRNTRCSAADLKSVCILGRRSDRMSLPRPAHPEPDR 54
G NT D KSV ++ SD P P EP+R
Sbjct: 662 GGNTSRRLNDRKSVIVIDSDSDEDEDPHPEQHEPER 697
>01_05_0740 -
24809951-24810394,24810622-24810700,24811651-24811809,
24812083-24812246,24812436-24812624,24813151-24813408,
24813463-24813951,24814062-24814262,24814368-24814639,
24814661-24814685,24814776-24814937,24815065-24815104,
24815244-24815353,24815812-24815898,24816013-24816507
Length = 1057
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +1
Query: 214 VFETFLPLSPVGLLLQQLPDEQGRIREALQEIIGRFVGENH 336
+ E L L VG LLQQ P E E I+ V E H
Sbjct: 352 LMEEALVLQAVGSLLQQYPSENSTQLELKVRILAENVTEKH 392
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,466,308
Number of Sequences: 37544
Number of extensions: 284706
Number of successful extensions: 894
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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