Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0492
(536 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ... 41 6e-04
At3g56090.1 68416.m06234 ferritin, putative similar to ferritin ... 40 8e-04
At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin... 38 0.004
At3g11050.1 68416.m01333 ferritin, putative similar to ferritin ... 33 0.091
At5g17220.1 68418.m02018 glutathione S-transferase, putative 30 0.85
At2g44630.1 68415.m05555 kelch repeat-containing F-box family pr... 29 1.5
At5g48570.1 68418.m06007 peptidyl-prolyl cis-trans isomerase, pu... 28 3.4
At2g31960.1 68415.m03905 glycosyl transferase family 48 protein ... 28 3.4
At2g06200.1 68415.m00682 expressed protein 28 3.4
At1g47570.1 68414.m05281 zinc finger (C3HC4-type RING finger) fa... 28 4.5
At2g26660.1 68415.m03198 SPX (SYG1/Pho81/XPR1) domain-containing... 27 6.0
At1g68670.1 68414.m07846 myb family transcription factor contain... 27 6.0
At5g63420.1 68418.m07962 metallo-beta-lactamase family protein 27 7.9
At4g34820.1 68417.m04941 expressed protein 27 7.9
At1g66020.1 68414.m07493 terpene synthase/cyclase family protein... 27 7.9
At1g13300.1 68414.m01544 myb family transcription factor contain... 27 7.9
>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 40.7 bits (91), Expect = 6e-04
Identities = 27/103 (26%), Positives = 49/103 (47%)
Frame = +2
Query: 227 SYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKG 406
SY Y +YF+ +G AK F++ S + E L+++ KRGG++ S +
Sbjct: 112 SYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQS---IVM 168
Query: 407 DKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSD 535
V+ G + + AL +K + E++ +H +KN+D
Sbjct: 169 PLSEFEHVDKGDALYGMELALSLEKLVNEKLLNLHSVASKNND 211
>At3g56090.1 68416.m06234 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 40.3 bits (90), Expect = 8e-04
Identities = 27/103 (26%), Positives = 48/103 (46%)
Frame = +2
Query: 227 SYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKG 406
SY Y +YF+ +G AK F++ S + E L+++ KRGG++ +
Sbjct: 110 SYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNKRGGRVKLQPMVLPQS 169
Query: 407 DKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSD 535
+ E G + A+ AL +K + E++ +H +KN D
Sbjct: 170 EFDH---PEKGDALYAMELALSLEKLVNEKLLNLHSVASKNDD 209
>At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin
[Arabidopsis thaliana] GI:1246401, GI:8163920
Length = 255
Score = 37.9 bits (84), Expect = 0.004
Identities = 24/103 (23%), Positives = 49/103 (47%)
Frame = +2
Query: 227 SYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKG 406
SY Y +YF+ +G AK F++ S++ +++ +RGG++ H +
Sbjct: 109 SYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGGRVKL--HPIVSP 166
Query: 407 DKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSD 535
+ E G + A+ AL +K E++ +H+ ++N+D
Sbjct: 167 ISEFEH-AEKGDALYAMELALSLEKLTNEKLLNVHKVASENND 208
>At3g11050.1 68416.m01333 ferritin, putative similar to ferritin
subunit cowpea2 precursor GI:2970654 (Vigna
unguiculata); contains Pfam profile PF00210:
Ferritin-like domain
Length = 253
Score = 33.5 bits (73), Expect = 0.091
Identities = 26/103 (25%), Positives = 43/103 (41%)
Frame = +2
Query: 227 SYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKG 406
SY Y +YF+ +GFAK F S + +++ KRGG++ S
Sbjct: 104 SYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRGGRVKLQSILMPVS 163
Query: 407 DKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSD 535
+ E G + A+ AL +K E++ + KN+D
Sbjct: 164 EFDHE---EKGDALHAMELALSLEKLTNEKLLKLQSVGVKNND 203
>At5g17220.1 68418.m02018 glutathione S-transferase, putative
Length = 214
Score = 30.3 bits (65), Expect = 0.85
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 152 YYGQFKDNHVVANELKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSD-DSWE 328
Y + N +A E +A L + YL+S + N R F + + ++SD SW+
Sbjct: 147 YNNRLSSNRFLAGEEFTMADLTHMPAMGYLMSITDINQMVKARGSFNRWWEEISDRPSWK 206
Query: 329 KTIGLIKH 352
K + L H
Sbjct: 207 KLMVLAGH 214
>At2g44630.1 68415.m05555 kelch repeat-containing F-box family
protein similar to SKP1 interacting partner 6
[Arabidopsis thaliana] GI:10716957; contains Pfam
profiles PF00646: F-box domain, PF01344: Kelch motif
Length = 372
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 188 NELKALASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKT 334
NE AS+ L R + L S Y N+Y T R+G + + + +D+W KT
Sbjct: 218 NEWFTHASVSLDRKVYALNSREYMNSYDT-RDGSYQRY-TIPEDNWWKT 264
>At5g48570.1 68418.m06007 peptidyl-prolyl cis-trans isomerase,
putative / FK506-binding protein, putative similar to
rof1 [Arabidopsis thaliana] GI:1373396
Length = 578
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 317 DSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSNYTVEVGHEIGALAKALDTQKQ 484
+ WEK L + K +++ T + G +TV+ GH AL+KA+ T K+
Sbjct: 173 EKWEKPKDLDEVYVKYEARLE--DGTIVGKSDGVEFTVKEGHFCPALSKAVKTMKR 226
>At2g31960.1 68415.m03905 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase;
contains non-consensus splice aite AC at exon 33
Length = 1959
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 257 FNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRG 367
+N + NR G K + WEK IG ++H KRG
Sbjct: 1729 WNKWIYNRGGIGVPPEKSWESWWEKEIGHLRHSGKRG 1765
>At2g06200.1 68415.m00682 expressed protein
Length = 244
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 369 PPLLVTCFMRPMVFSHESSDNFLKSFANPSL 277
PP L+ RP +FS SS + SF +P+L
Sbjct: 32 PPHLLFLIKRPFLFSSSSSSSSSSSFFSPTL 62
>At1g47570.1 68414.m05281 zinc finger (C3HC4-type RING finger)
family protein contains Pfam PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 466
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -1
Query: 143 SAADLKSVCILG-RRSDRMSLPRPAHPEPDRQR 48
S+A ++S I+G +R R+++P P H E D R
Sbjct: 221 SSASIQSNLIIGSKRKRRLNMPAPTHEERDSLR 253
>At2g26660.1 68415.m03198 SPX (SYG1/Pho81/XPR1) domain-containing
protein low similarity to NUC-2 [Neurospora crassa]
GI:1399532, xenotropic and polytropic murine leukemia
virus receptor [Mus musculus castaneus] GI:6093320;
contains Pfam profile PF03105: SPX domain
Length = 287
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 308 LSDDSWEKTIGLIKHVTK 361
L DDSW+K +G+++ V K
Sbjct: 270 LEDDSWKKKVGVLEQVAK 287
>At1g68670.1 68414.m07846 myb family transcription factor contains
Pfam domain, PF00249: Myb-like DNA-binding domain
Length = 354
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/35 (31%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 178 RCSERTEGI-SLTVFETFLPLSPVGLLLQQLPDEQ 279
+CSE+T + VFE F+P+ + L +++ +E+
Sbjct: 63 QCSEQTTSVCGGPVFEEFIPIKKISSLCEEVQEEE 97
>At5g63420.1 68418.m07962 metallo-beta-lactamase family protein
Length = 911
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 339 PMVFSHESSDNFLKSFANPS 280
P+ S E SD+F KSF NPS
Sbjct: 749 PVGSSSEESDDFWKSFINPS 768
>At4g34820.1 68417.m04941 expressed protein
Length = 321
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 395 TLKGDKGSNYTVEVGHEIGALAKALD 472
T +G+K + T VG EIGAL + LD
Sbjct: 233 TPEGEKTIDLTGRVGQEIGALLRRLD 258
>At1g66020.1 68414.m07493 terpene synthase/cyclase family protein
contains Pfam profile: PF01397: Terpene synthase family
Length = 598
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 266 YQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSN 421
Y+T R+GF K+ + D+ T+ +I +R G + S + KGSN
Sbjct: 131 YETLRDGFGKIEEMMEDEDDLCTVSIIFWAFRRYG--HYISSDVFRRFKGSN 180
>At1g13300.1 68414.m01544 myb family transcription factor contains
Pfam domain, PF00249: Myb-like DNA-binding domain
Length = 344
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 169 GQPRCSERTEGISLTVFETFLPL 237
GQP CSE+T G V E FL +
Sbjct: 66 GQPECSEQTTGECGPVLEQFLTI 88
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,203,193
Number of Sequences: 28952
Number of extensions: 214244
Number of successful extensions: 666
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 993966856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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