Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0489
         (542 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    26   0.19 
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    25   0.43 
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   1.3  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   2.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   5.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.3  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   5.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.2  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +1

Query: 130 LENLLIPHHQHHSLVQYNHQQTQSH-Y**ILDTRILPVYQNRKNHRPVYRNQRSHHCLHR 306
           +E + + H    ++ Q +HQQ  SH     +  R  P+  +  +   ++ N  SHH L +
Sbjct: 300 VEQMNLLHSNDLNMHQQHHQQNMSHEELSAMVNRCHPLSLSSDHQAMLHHNPMSHH-LKQ 358

Query: 307 ELKAYTKQTIP 339
           E   +T    P
Sbjct: 359 EPSGFTSSNHP 369


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 25.0 bits (52), Expect = 0.43
 Identities = 16/48 (33%), Positives = 19/48 (39%)
 Frame = +3

Query: 60  NDLLKQAKAGKPISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEP 203
           N L    KA  PI    +PP   +  P  S+P       V P T P P
Sbjct: 56  NQLFTHHKA--PIRPVALPPKREIPSPKRSSPILAEKVSVSPTTPPTP 101


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = +3

Query: 96  ISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEPLLIDLG 221
           I  ED+ P+   G  ADS  S    GP   P   E L +  G
Sbjct: 153 IGREDLSPSSLNGYSADSCDSKKKKGPT--PRQQEELCLVCG 192


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 437 CFIPRFFTVQRRRFKLCLTFQYCLQLLLSLRSEGIVCLV 321
           C I   F  + R   L LT Q   +   + + EG+VC +
Sbjct: 163 CVIVCIFRGKYRNINLLLTEQLQNRRFFAKKMEGLVCSI 201


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +3

Query: 36  IQPRYKTLNDLLKQAKAGKPISEED 110
           ++ R+KT+N++L+   A K I  +D
Sbjct: 197 LKTRFKTINNILENLWAKKLIVVKD 221


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 382 VKQSLKRRRCTVKN 423
           +K  +K+R+CTV N
Sbjct: 10  IKCPVKKRKCTVSN 23



 Score = 20.6 bits (41), Expect = 9.2
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = -1

Query: 398 FKLCLTFQYCLQLLLSLRSEGIVCL 324
           F LC+ + YC  ++ ++    ++C+
Sbjct: 142 FLLCIYYFYCAFIIFTVHLLFLLCI 166


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = +3

Query: 90  KPISEEDIPPAVSLGKPADSTPSAPLSGPVQ 182
           +P+     PP  SLG    S P      P++
Sbjct: 206 EPVPSTPYPPPGSLGSMGVSVPCGTSGNPLE 236


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +3

Query: 66  LLKQAKAGKPISEEDIPPAVSLGKPADSTPSAPLSGPV 179
           +L  +K G+    +     V+L KP       P +GP+
Sbjct: 205 ILDFSKRGQKSDADSDSDVVNLSKPGTPPSGEPGNGPL 242


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,459
Number of Sequences: 336
Number of extensions: 2262
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)