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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0489
         (542 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_25388| Best HMM Match : No HMM Matches (HMM E-Value=.)              38   0.004
SB_50958| Best HMM Match : Hc1 (HMM E-Value=3.7)                       35   0.049
SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5)                33   0.15 
SB_58044| Best HMM Match : Vitellogenin_N (HMM E-Value=0.022)          32   0.35 
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.1  
SB_41786| Best HMM Match : AT_hook (HMM E-Value=0.24)                  30   1.4  
SB_36681| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.4  
SB_30003| Best HMM Match : DUF906 (HMM E-Value=0)                      30   1.4  
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.4  
SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9)                29   1.9  
SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   2.5  
SB_5350| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   2.5  
SB_17044| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.2  
SB_13696| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.2  
SB_7144| Best HMM Match : DUF834 (HMM E-Value=2.8)                     28   4.3  
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)                     28   5.7  
SB_20284| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.7  
SB_18392| Best HMM Match : DUF1635 (HMM E-Value=5.3)                   28   5.7  
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)              28   5.7  
SB_3226| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.021)           28   5.7  
SB_38362| Best HMM Match : BRCT (HMM E-Value=0)                        28   5.7  
SB_26176| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.5  
SB_26060| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.5  
SB_56158| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.5  
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.5  
SB_12027| Best HMM Match : Extensin_2 (HMM E-Value=0.2)                27   7.5  
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)               27   7.5  
SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0)                    27   9.9  
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)                27   9.9  
SB_19913| Best HMM Match : zf-C2H2 (HMM E-Value=8.9e-08)               27   9.9  
SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   9.9  
SB_48470| Best HMM Match : HNOB (HMM E-Value=0)                        27   9.9  
SB_19389| Best HMM Match : ABC1 (HMM E-Value=2.2)                      27   9.9  
SB_1657| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   9.9  

>SB_25388| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 186

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 17/51 (33%), Positives = 30/51 (58%)
 Frame = +3

Query: 51  KTLNDLLKQAKAGKPISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEP 203
           K + D++KQA AG+ ++ E++PP V++     S  + P + P +    PEP
Sbjct: 123 KQIQDMVKQANAGESVNMEELPPPVAI-----SAAAVPTAAPQEATPSPEP 168


>SB_50958| Best HMM Match : Hc1 (HMM E-Value=3.7)
          Length = 363

 Score = 34.7 bits (76), Expect = 0.049
 Identities = 16/38 (42%), Positives = 25/38 (65%)
 Frame = +3

Query: 354 QQKLQAILKRQAEFKAAALHCKKSGDKALALEFLKTVK 467
           +Q+L  +++RQ EFK AAL+ K+ GD   A  +L+  K
Sbjct: 137 EQQLNFLVERQKEFKMAALNAKREGDLESARHWLRMSK 174


>SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5)
          Length = 237

 Score = 33.1 bits (72), Expect = 0.15
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = +1

Query: 139 LLIPHHQHHSL-VQYNHQQTQSHY**ILDTRILPVYQNRKNHRPVYRNQRSHHCLHR 306
           ++I HH HH L +   H+    H+     + I+ + ++R  HR  Y   R HH  HR
Sbjct: 151 IIIVHHHHHPLSIAIIHRHRHHHHHHHHPSTIIIILRHR--HRQHYNRHRRHHHHHR 205


>SB_58044| Best HMM Match : Vitellogenin_N (HMM E-Value=0.022)
          Length = 1671

 Score = 31.9 bits (69), Expect = 0.35
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +3

Query: 36   IQPRYKTLNDLLKQAKAGKPISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPE 200
            I+   K + D+L++   G+ + E DIP  +         P+ P   PV PP + E
Sbjct: 1499 IRDDIKKVKDVLRKV-TGREVEEVDIPTTLPTAPTLPGIPTVPTGLPVTPPFNKE 1552


>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 440

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
 Frame = +3

Query: 33  KIQPRYKTLNDLLKQAKAGKPISEEDIPPAVSLGKPADSTPSAPLSG--PVQPPTDPEPL 206
           ++  RY        Q     P++   +PP    G PA + P  PL    P  PP  P P+
Sbjct: 265 RVSRRYTNTQRPTSQPPPPPPLTGGMLPPPFG-GHPAAAPPPPPLPAGVPAPPPPPPPPM 323

Query: 207 L 209
           L
Sbjct: 324 L 324


>SB_41786| Best HMM Match : AT_hook (HMM E-Value=0.24)
          Length = 324

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 21/56 (37%), Positives = 23/56 (41%)
 Frame = +3

Query: 39  QPRYKTLNDLLKQAKAGKPISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEPL 206
           +PR K      KQ K  K  S E   P     K    TP A L   V+PP D  PL
Sbjct: 81  KPREKKEKPKEKQEKKPKKASSEKKEPEEVTAKDQAPTPQASLE-EVEPPKDIPPL 135


>SB_36681| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1081

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 14/37 (37%), Positives = 15/37 (40%)
 Frame = +3

Query: 99  SEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEPLL 209
           S+ D P       P D     P   P  PPTDP  LL
Sbjct: 22  SQTDPPTDPPTDPPTDPPTDPPTDPPTDPPTDPPTLL 58


>SB_30003| Best HMM Match : DUF906 (HMM E-Value=0)
          Length = 2276

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +1

Query: 292  HCLHRELKAYTKQTIPSLLRDSRSCRQY*NVKQSLKRRRCTVKNRGI 432
            HC+ RE      + I + LR  +  +++ N +Q+L+RR   ++NRG+
Sbjct: 1565 HCMERECVVPFCRHIKAKLRQQQLQQRF-NQQQTLRRRMALMQNRGL 1610


>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1212

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 16/56 (28%), Positives = 25/56 (44%)
 Frame = +3

Query: 36   IQPRYKTLNDLLKQAKAGKPISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEP 203
            ++P   T   +  + KA  P S + +PP      P  + P  P   P  PP++P P
Sbjct: 1017 LKPPGPTEQPVPPKRKASPP-SAQPLPPPRKPSPPPSAVPIPPPRKPSPPPSEPAP 1071



 Score = 28.3 bits (60), Expect = 4.3
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +3

Query: 93   PISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEP 203
            P   +  PP  ++  P    PS P S P  PP  P P
Sbjct: 1042 PPPRKPSPPPSAVPIPPPRKPSPPPSEPAPPPRQPPP 1078



 Score = 27.9 bits (59), Expect = 5.7
 Identities = 13/44 (29%), Positives = 17/44 (38%)
 Frame = +3

Query: 93   PISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEPLLIDLGH 224
            P   +  PP      P    P    S PV PP  P+P+  +  H
Sbjct: 1057 PPPRKPSPPPSEPAPPPRQPPPPSTSQPVPPPRQPDPIPTNPAH 1100


>SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9)
          Length = 496

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +3

Query: 72  KQAKAGKPISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEPL 206
           K+AK+   ++ ++I  A  LG P D  PS P  G  + PT P P+
Sbjct: 52  KEAKSKTTLTRKNISNA--LGPPPDP-PSRPGGGKEEEPTSPPPM 93


>SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1894

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 108  DIPPAVSLGKPADSTPSAPLSGPVQPPTDPEP 203
            D PP++S  +   +T S P+SG    PT+P P
Sbjct: 1767 DEPPSIS--RHLSNTSSEPISGDTPTPTEPAP 1796


>SB_5350| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 522

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
 Frame = +3

Query: 114 PPAVSLGKPA--DSTPSAPLSGPVQPPTDPEP 203
           PP+     PA   STP AP + P  PP  P P
Sbjct: 357 PPSTPAPTPAPLSSTPCAPFAPPPPPPPPPPP 388


>SB_17044| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 386

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 20/57 (35%), Positives = 24/57 (42%)
 Frame = +3

Query: 42  PRYKTLNDLLKQAKAGKPISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEPLLI 212
           P    L  LL   K  + IS    PPA +      S P AP  GP  PP  P P ++
Sbjct: 93  PSANVLQTLL--TKTSQAISAVQGPPAPT---SVPSGPRAPPGGPGAPPPPPPPAVV 144


>SB_13696| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 676

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 93  PISEEDIPPAVSLGKPADSTPSAPLSGPVQP 185
           P+SEE +   V+     DS P  P S P QP
Sbjct: 405 PLSEETVKSTVTQDSKEDSEPVTPDSEPAQP 435


>SB_7144| Best HMM Match : DUF834 (HMM E-Value=2.8)
          Length = 497

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 13/35 (37%), Positives = 24/35 (68%)
 Frame = +1

Query: 253 KNHRPVYRNQRSHHCLHRELKAYTKQTIPSLLRDS 357
           ++ + V+R++ +HHCL RE++A T +    +LR S
Sbjct: 317 RDGQQVHRHE-AHHCLVREIRAETARDDTEILRRS 350


>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
          Length = 480

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 93  PISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEPL 206
           P+  +  PP   + KP  ST SAP   P  P   P+PL
Sbjct: 334 PLRGQIAPPPPPISKPPTSTRSAP---PPPPGRAPQPL 368


>SB_20284| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3307

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +3

Query: 81   KAGKPISEEDIPPAVSLGKP-ADSTPSAPLSGPVQPPTDPEPLLI 212
            K GK   E   PP   LGK  ADS   APL   + P +DP   L+
Sbjct: 2421 KLGKKYIE---PPPFDLGKAFADSNSCAPLIFVLSPGSDPTAALL 2462


>SB_18392| Best HMM Match : DUF1635 (HMM E-Value=5.3)
          Length = 178

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +3

Query: 378 KRQAEFKAAALHCKKSGDKALALEFLKTVKQFDVLVTAF 494
           KRQ + ++  LH  K  +K LALE    +K+ + ++T+F
Sbjct: 30  KRQQDIESLKLHIAKKDEKILALEV--QLKEAEQILTSF 66


>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
          Length = 392

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 93  PISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEPL 206
           P+  +  PP   + KP  ST SAP   P  P   P+PL
Sbjct: 246 PLRGQIAPPPPPISKPPTSTRSAP---PPPPGRAPQPL 280


>SB_3226| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.021)
          Length = 1217

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 17/30 (56%), Positives = 19/30 (63%)
 Frame = +3

Query: 351 RQQKLQAILKRQAEFKAAALHCKKSGDKAL 440
           R+Q+LQ I KRQA  K AAL     G KAL
Sbjct: 571 RRQELQDIEKRQAMDKIAALKKTTVGAKAL 600


>SB_38362| Best HMM Match : BRCT (HMM E-Value=0)
          Length = 1572

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
 Frame = +3

Query: 27  G*KIQPRYKTLNDLLKQAKAGKPISEEDIP-PAVSLGKPADSTPS 158
           G ++QP   T++ +++ AK+G+ + EED   P     +  DS PS
Sbjct: 432 GSELQPHVVTVDWIIESAKSGRKLPEEDYTHPDFQNEETDDSFPS 476


>SB_26176| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 535

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = +3

Query: 93  PISEEDIPPAVSLGKPAD-STPSAPLSGPVQPP--TDPEP 203
           P  EE  P   S G+ +  S P  PL GP+ PP  T P+P
Sbjct: 460 PSCEELHPLRDSNGRASTTSDPIQPLCGPISPPQATTPQP 499


>SB_26060| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2671

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
 Frame = +3

Query: 42   PRYKTLNDLLKQAKAGKPISEEDIPP-----AVSLGKPADSTP--SAPLSGPVQPPTDPE 200
            P + T  D +   ++G  I E+D        A   G P+++T   + P S   +PP D  
Sbjct: 1658 PSFSTNEDCVTHTESGYTIEEKDFASRDEEIAAGQGTPSETTRGINHPASKDKEPPADAA 1717

Query: 201  PLL 209
            P L
Sbjct: 1718 PAL 1720


>SB_56158| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 212

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -3

Query: 528 LNRSPSPRWSF*KQSPEHRTA-SLSSKTRVLMLYPPIFYSATPP 400
           L R P PR    K+ P  +   +L +KT+ L+  PP F    PP
Sbjct: 167 LRRKPPPRSPL-KRPPRSKVLPTLYNKTKRLLYEPPKFAKVVPP 209


>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 736

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 151 HHQHHSLVQYNHQQTQSHY 207
           HH HH   Q+NH Q   H+
Sbjct: 258 HHHHHHHHQHNHHQHHHHH 276


>SB_12027| Best HMM Match : Extensin_2 (HMM E-Value=0.2)
          Length = 1706

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 87   GKPISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEP 203
            G  ++ E++PP   L  P    PS P     QPP  P+P
Sbjct: 1250 GSIVTVEELPPLPPLPPPDAQPPSLP----PQPPQPPQP 1284


>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
          Length = 867

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +3

Query: 114 PPAVSLGKPADSTPSAPLSGPVQPPTDPEPLLIDL 218
           PP      P   +PS P   P  PP+ P PL   L
Sbjct: 211 PPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKL 245


>SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0)
          Length = 1321

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
 Frame = +3

Query: 99   SEEDIPPAVSLGKPADSTPSAPLSGPVQPP--TDPEPL 206
            S+   PP   +  P  S P  P    V PP  + P+PL
Sbjct: 894  SQPQPPPGNQVNPPMSSQPQPPPGNQVNPPMSSQPQPL 931



 Score = 27.1 bits (57), Expect = 9.9
 Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
 Frame = +3

Query: 27   G*KIQPRYKTLNDLLKQAKAGKPISEE-DIPPAVSLGKPADSTPSAPLSGPVQPPTDPEP 203
            G ++ P   +    L   +   P+S +   PP   +  P  S P  P    V PP   +P
Sbjct: 917  GNQVNPPMSSQPQPLPGNQVNPPMSSQPQPPPGNQVNPPMSSQPQPPPGNQVNPPMSSQP 976


>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
          Length = 382

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +3

Query: 111 IPPAVSLGKPADSTPSAPLSGPVQPPTDPEPLL 209
           IPPA      A +TP+ P+     PP  P P +
Sbjct: 229 IPPAPPNPSKAIATPNPPMPETPLPPATPNPFI 261


>SB_19913| Best HMM Match : zf-C2H2 (HMM E-Value=8.9e-08)
          Length = 532

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 138 PADSTPSAPLSGPVQPPTDP 197
           PA  TP  P++GPV PP  P
Sbjct: 252 PAHETPE-PIAGPVTPPATP 270


>SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 393

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = +3

Query: 81  KAGKPISEEDIPPAVSLGKPAD-STPSAPLSGPVQPPTDPEP 203
           KA   +S     P+++   P   + P+AP   P  PP  P P
Sbjct: 143 KAQVQVSASSSGPSIASQPPQPPAPPAAPFMAPAAPPAPPPP 184


>SB_48470| Best HMM Match : HNOB (HMM E-Value=0)
          Length = 681

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = -2

Query: 490 AVTRTSN-CFTVFKNSSANALSPDFL 416
           A+T T+N C T F N ++  L+PD L
Sbjct: 170 AITETTNQCHTSFDNHASKPLAPDLL 195


>SB_19389| Best HMM Match : ABC1 (HMM E-Value=2.2)
          Length = 340

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
 Frame = +1

Query: 262 RPVYRNQRSHHCLHRELKAY----TKQTIPSLLRDSRSCR 369
           RP++ + RS+H      K +    + + + +LLRD  SCR
Sbjct: 289 RPIWNHNRSNHLALGSNKKFILKDSSEVLHTLLRDGESCR 328


>SB_1657| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 190

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 15/50 (30%), Positives = 20/50 (40%)
 Frame = +3

Query: 69  LKQAKAGKPISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEPLLIDL 218
           + Q  A    S   +     +G  A + P  P+S P QPP  P     DL
Sbjct: 50  VSQPPADLSSSSTRVKDTSQIGPSAPTRPRLPVSTPRQPPPKPREKTDDL 99


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,658,450
Number of Sequences: 59808
Number of extensions: 274671
Number of successful extensions: 1203
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1239956166
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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