BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= P5PG0489 (542 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_25388| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004 SB_50958| Best HMM Match : Hc1 (HMM E-Value=3.7) 35 0.049 SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5) 33 0.15 SB_58044| Best HMM Match : Vitellogenin_N (HMM E-Value=0.022) 32 0.35 SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1 SB_41786| Best HMM Match : AT_hook (HMM E-Value=0.24) 30 1.4 SB_36681| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4 SB_30003| Best HMM Match : DUF906 (HMM E-Value=0) 30 1.4 SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4 SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9) 29 1.9 SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5 SB_5350| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5 SB_17044| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2 SB_13696| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2 SB_7144| Best HMM Match : DUF834 (HMM E-Value=2.8) 28 4.3 SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 28 5.7 SB_20284| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7 SB_18392| Best HMM Match : DUF1635 (HMM E-Value=5.3) 28 5.7 SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 28 5.7 SB_3226| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.021) 28 5.7 SB_38362| Best HMM Match : BRCT (HMM E-Value=0) 28 5.7 SB_26176| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5 SB_26060| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5 SB_56158| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5 SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5 SB_12027| Best HMM Match : Extensin_2 (HMM E-Value=0.2) 27 7.5 SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 27 7.5 SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0) 27 9.9 SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 27 9.9 SB_19913| Best HMM Match : zf-C2H2 (HMM E-Value=8.9e-08) 27 9.9 SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9 SB_48470| Best HMM Match : HNOB (HMM E-Value=0) 27 9.9 SB_19389| Best HMM Match : ABC1 (HMM E-Value=2.2) 27 9.9 SB_1657| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9 >SB_25388| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 186 Score = 38.3 bits (85), Expect = 0.004 Identities = 17/51 (33%), Positives = 30/51 (58%) Frame = +3 Query: 51 KTLNDLLKQAKAGKPISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEP 203 K + D++KQA AG+ ++ E++PP V++ S + P + P + PEP Sbjct: 123 KQIQDMVKQANAGESVNMEELPPPVAI-----SAAAVPTAAPQEATPSPEP 168 >SB_50958| Best HMM Match : Hc1 (HMM E-Value=3.7) Length = 363 Score = 34.7 bits (76), Expect = 0.049 Identities = 16/38 (42%), Positives = 25/38 (65%) Frame = +3 Query: 354 QQKLQAILKRQAEFKAAALHCKKSGDKALALEFLKTVK 467 +Q+L +++RQ EFK AAL+ K+ GD A +L+ K Sbjct: 137 EQQLNFLVERQKEFKMAALNAKREGDLESARHWLRMSK 174 >SB_257| Best HMM Match : Tetraspannin (HMM E-Value=1.5) Length = 237 Score = 33.1 bits (72), Expect = 0.15 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +1 Query: 139 LLIPHHQHHSL-VQYNHQQTQSHY**ILDTRILPVYQNRKNHRPVYRNQRSHHCLHR 306 ++I HH HH L + H+ H+ + I+ + ++R HR Y R HH HR Sbjct: 151 IIIVHHHHHPLSIAIIHRHRHHHHHHHHPSTIIIILRHR--HRQHYNRHRRHHHHHR 205 >SB_58044| Best HMM Match : Vitellogenin_N (HMM E-Value=0.022) Length = 1671 Score = 31.9 bits (69), Expect = 0.35 Identities = 16/55 (29%), Positives = 26/55 (47%) Frame = +3 Query: 36 IQPRYKTLNDLLKQAKAGKPISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPE 200 I+ K + D+L++ G+ + E DIP + P+ P PV PP + E Sbjct: 1499 IRDDIKKVKDVLRKV-TGREVEEVDIPTTLPTAPTLPGIPTVPTGLPVTPPFNKE 1552 >SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 440 Score = 30.3 bits (65), Expect = 1.1 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 2/61 (3%) Frame = +3 Query: 33 KIQPRYKTLNDLLKQAKAGKPISEEDIPPAVSLGKPADSTPSAPLSG--PVQPPTDPEPL 206 ++ RY Q P++ +PP G PA + P PL P PP P P+ Sbjct: 265 RVSRRYTNTQRPTSQPPPPPPLTGGMLPPPFG-GHPAAAPPPPPLPAGVPAPPPPPPPPM 323 Query: 207 L 209 L Sbjct: 324 L 324 >SB_41786| Best HMM Match : AT_hook (HMM E-Value=0.24) Length = 324 Score = 29.9 bits (64), Expect = 1.4 Identities = 21/56 (37%), Positives = 23/56 (41%) Frame = +3 Query: 39 QPRYKTLNDLLKQAKAGKPISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEPL 206 +PR K KQ K K S E P K TP A L V+PP D PL Sbjct: 81 KPREKKEKPKEKQEKKPKKASSEKKEPEEVTAKDQAPTPQASLE-EVEPPKDIPPL 135 >SB_36681| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1081 Score = 29.9 bits (64), Expect = 1.4 Identities = 14/37 (37%), Positives = 15/37 (40%) Frame = +3 Query: 99 SEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEPLL 209 S+ D P P D P P PPTDP LL Sbjct: 22 SQTDPPTDPPTDPPTDPPTDPPTDPPTDPPTDPPTLL 58 >SB_30003| Best HMM Match : DUF906 (HMM E-Value=0) Length = 2276 Score = 29.9 bits (64), Expect = 1.4 Identities = 15/47 (31%), Positives = 28/47 (59%) Frame = +1 Query: 292 HCLHRELKAYTKQTIPSLLRDSRSCRQY*NVKQSLKRRRCTVKNRGI 432 HC+ RE + I + LR + +++ N +Q+L+RR ++NRG+ Sbjct: 1565 HCMERECVVPFCRHIKAKLRQQQLQQRF-NQQQTLRRRMALMQNRGL 1610 >SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1212 Score = 29.9 bits (64), Expect = 1.4 Identities = 16/56 (28%), Positives = 25/56 (44%) Frame = +3 Query: 36 IQPRYKTLNDLLKQAKAGKPISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEP 203 ++P T + + KA P S + +PP P + P P P PP++P P Sbjct: 1017 LKPPGPTEQPVPPKRKASPP-SAQPLPPPRKPSPPPSAVPIPPPRKPSPPPSEPAP 1071 Score = 28.3 bits (60), Expect = 4.3 Identities = 13/37 (35%), Positives = 16/37 (43%) Frame = +3 Query: 93 PISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEP 203 P + PP ++ P PS P S P PP P P Sbjct: 1042 PPPRKPSPPPSAVPIPPPRKPSPPPSEPAPPPRQPPP 1078 Score = 27.9 bits (59), Expect = 5.7 Identities = 13/44 (29%), Positives = 17/44 (38%) Frame = +3 Query: 93 PISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEPLLIDLGH 224 P + PP P P S PV PP P+P+ + H Sbjct: 1057 PPPRKPSPPPSEPAPPPRQPPPPSTSQPVPPPRQPDPIPTNPAH 1100 >SB_46725| Best HMM Match : Extensin_2 (HMM E-Value=1.9) Length = 496 Score = 29.5 bits (63), Expect = 1.9 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = +3 Query: 72 KQAKAGKPISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEPL 206 K+AK+ ++ ++I A LG P D PS P G + PT P P+ Sbjct: 52 KEAKSKTTLTRKNISNA--LGPPPDP-PSRPGGGKEEEPTSPPPM 93 >SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1894 Score = 29.1 bits (62), Expect = 2.5 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 108 DIPPAVSLGKPADSTPSAPLSGPVQPPTDPEP 203 D PP++S + +T S P+SG PT+P P Sbjct: 1767 DEPPSIS--RHLSNTSSEPISGDTPTPTEPAP 1796 >SB_5350| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 522 Score = 29.1 bits (62), Expect = 2.5 Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%) Frame = +3 Query: 114 PPAVSLGKPA--DSTPSAPLSGPVQPPTDPEP 203 PP+ PA STP AP + P PP P P Sbjct: 357 PPSTPAPTPAPLSSTPCAPFAPPPPPPPPPPP 388 >SB_17044| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 386 Score = 28.7 bits (61), Expect = 3.2 Identities = 20/57 (35%), Positives = 24/57 (42%) Frame = +3 Query: 42 PRYKTLNDLLKQAKAGKPISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEPLLI 212 P L LL K + IS PPA + S P AP GP PP P P ++ Sbjct: 93 PSANVLQTLL--TKTSQAISAVQGPPAPT---SVPSGPRAPPGGPGAPPPPPPPAVV 144 >SB_13696| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 676 Score = 28.7 bits (61), Expect = 3.2 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = +3 Query: 93 PISEEDIPPAVSLGKPADSTPSAPLSGPVQP 185 P+SEE + V+ DS P P S P QP Sbjct: 405 PLSEETVKSTVTQDSKEDSEPVTPDSEPAQP 435 >SB_7144| Best HMM Match : DUF834 (HMM E-Value=2.8) Length = 497 Score = 28.3 bits (60), Expect = 4.3 Identities = 13/35 (37%), Positives = 24/35 (68%) Frame = +1 Query: 253 KNHRPVYRNQRSHHCLHRELKAYTKQTIPSLLRDS 357 ++ + V+R++ +HHCL RE++A T + +LR S Sbjct: 317 RDGQQVHRHE-AHHCLVREIRAETARDDTEILRRS 350 >SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) Length = 480 Score = 27.9 bits (59), Expect = 5.7 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = +3 Query: 93 PISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEPL 206 P+ + PP + KP ST SAP P P P+PL Sbjct: 334 PLRGQIAPPPPPISKPPTSTRSAP---PPPPGRAPQPL 368 >SB_20284| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3307 Score = 27.9 bits (59), Expect = 5.7 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Frame = +3 Query: 81 KAGKPISEEDIPPAVSLGKP-ADSTPSAPLSGPVQPPTDPEPLLI 212 K GK E PP LGK ADS APL + P +DP L+ Sbjct: 2421 KLGKKYIE---PPPFDLGKAFADSNSCAPLIFVLSPGSDPTAALL 2462 >SB_18392| Best HMM Match : DUF1635 (HMM E-Value=5.3) Length = 178 Score = 27.9 bits (59), Expect = 5.7 Identities = 14/39 (35%), Positives = 24/39 (61%) Frame = +3 Query: 378 KRQAEFKAAALHCKKSGDKALALEFLKTVKQFDVLVTAF 494 KRQ + ++ LH K +K LALE +K+ + ++T+F Sbjct: 30 KRQQDIESLKLHIAKKDEKILALEV--QLKEAEQILTSF 66 >SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) Length = 392 Score = 27.9 bits (59), Expect = 5.7 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = +3 Query: 93 PISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEPL 206 P+ + PP + KP ST SAP P P P+PL Sbjct: 246 PLRGQIAPPPPPISKPPTSTRSAP---PPPPGRAPQPL 280 >SB_3226| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.021) Length = 1217 Score = 27.9 bits (59), Expect = 5.7 Identities = 17/30 (56%), Positives = 19/30 (63%) Frame = +3 Query: 351 RQQKLQAILKRQAEFKAAALHCKKSGDKAL 440 R+Q+LQ I KRQA K AAL G KAL Sbjct: 571 RRQELQDIEKRQAMDKIAALKKTTVGAKAL 600 >SB_38362| Best HMM Match : BRCT (HMM E-Value=0) Length = 1572 Score = 27.9 bits (59), Expect = 5.7 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Frame = +3 Query: 27 G*KIQPRYKTLNDLLKQAKAGKPISEEDIP-PAVSLGKPADSTPS 158 G ++QP T++ +++ AK+G+ + EED P + DS PS Sbjct: 432 GSELQPHVVTVDWIIESAKSGRKLPEEDYTHPDFQNEETDDSFPS 476 >SB_26176| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 535 Score = 27.5 bits (58), Expect = 7.5 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%) Frame = +3 Query: 93 PISEEDIPPAVSLGKPAD-STPSAPLSGPVQPP--TDPEP 203 P EE P S G+ + S P PL GP+ PP T P+P Sbjct: 460 PSCEELHPLRDSNGRASTTSDPIQPLCGPISPPQATTPQP 499 >SB_26060| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2671 Score = 27.5 bits (58), Expect = 7.5 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 7/63 (11%) Frame = +3 Query: 42 PRYKTLNDLLKQAKAGKPISEEDIPP-----AVSLGKPADSTP--SAPLSGPVQPPTDPE 200 P + T D + ++G I E+D A G P+++T + P S +PP D Sbjct: 1658 PSFSTNEDCVTHTESGYTIEEKDFASRDEEIAAGQGTPSETTRGINHPASKDKEPPADAA 1717 Query: 201 PLL 209 P L Sbjct: 1718 PAL 1720 >SB_56158| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 212 Score = 27.5 bits (58), Expect = 7.5 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Frame = -3 Query: 528 LNRSPSPRWSF*KQSPEHRTA-SLSSKTRVLMLYPPIFYSATPP 400 L R P PR K+ P + +L +KT+ L+ PP F PP Sbjct: 167 LRRKPPPRSPL-KRPPRSKVLPTLYNKTKRLLYEPPKFAKVVPP 209 >SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 736 Score = 27.5 bits (58), Expect = 7.5 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = +1 Query: 151 HHQHHSLVQYNHQQTQSHY 207 HH HH Q+NH Q H+ Sbjct: 258 HHHHHHHHQHNHHQHHHHH 276 >SB_12027| Best HMM Match : Extensin_2 (HMM E-Value=0.2) Length = 1706 Score = 27.5 bits (58), Expect = 7.5 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = +3 Query: 87 GKPISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEP 203 G ++ E++PP L P PS P QPP P+P Sbjct: 1250 GSIVTVEELPPLPPLPPPDAQPPSLP----PQPPQPPQP 1284 >SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) Length = 867 Score = 27.5 bits (58), Expect = 7.5 Identities = 13/35 (37%), Positives = 15/35 (42%) Frame = +3 Query: 114 PPAVSLGKPADSTPSAPLSGPVQPPTDPEPLLIDL 218 PP P +PS P P PP+ P PL L Sbjct: 211 PPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKL 245 >SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0) Length = 1321 Score = 27.1 bits (57), Expect = 9.9 Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 2/38 (5%) Frame = +3 Query: 99 SEEDIPPAVSLGKPADSTPSAPLSGPVQPP--TDPEPL 206 S+ PP + P S P P V PP + P+PL Sbjct: 894 SQPQPPPGNQVNPPMSSQPQPPPGNQVNPPMSSQPQPL 931 Score = 27.1 bits (57), Expect = 9.9 Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 1/60 (1%) Frame = +3 Query: 27 G*KIQPRYKTLNDLLKQAKAGKPISEE-DIPPAVSLGKPADSTPSAPLSGPVQPPTDPEP 203 G ++ P + L + P+S + PP + P S P P V PP +P Sbjct: 917 GNQVNPPMSSQPQPLPGNQVNPPMSSQPQPPPGNQVNPPMSSQPQPPPGNQVNPPMSSQP 976 >SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) Length = 382 Score = 27.1 bits (57), Expect = 9.9 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = +3 Query: 111 IPPAVSLGKPADSTPSAPLSGPVQPPTDPEPLL 209 IPPA A +TP+ P+ PP P P + Sbjct: 229 IPPAPPNPSKAIATPNPPMPETPLPPATPNPFI 261 >SB_19913| Best HMM Match : zf-C2H2 (HMM E-Value=8.9e-08) Length = 532 Score = 27.1 bits (57), Expect = 9.9 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +3 Query: 138 PADSTPSAPLSGPVQPPTDP 197 PA TP P++GPV PP P Sbjct: 252 PAHETPE-PIAGPVTPPATP 270 >SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 393 Score = 27.1 bits (57), Expect = 9.9 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 1/42 (2%) Frame = +3 Query: 81 KAGKPISEEDIPPAVSLGKPAD-STPSAPLSGPVQPPTDPEP 203 KA +S P+++ P + P+AP P PP P P Sbjct: 143 KAQVQVSASSSGPSIASQPPQPPAPPAAPFMAPAAPPAPPPP 184 >SB_48470| Best HMM Match : HNOB (HMM E-Value=0) Length = 681 Score = 27.1 bits (57), Expect = 9.9 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%) Frame = -2 Query: 490 AVTRTSN-CFTVFKNSSANALSPDFL 416 A+T T+N C T F N ++ L+PD L Sbjct: 170 AITETTNQCHTSFDNHASKPLAPDLL 195 >SB_19389| Best HMM Match : ABC1 (HMM E-Value=2.2) Length = 340 Score = 27.1 bits (57), Expect = 9.9 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 4/40 (10%) Frame = +1 Query: 262 RPVYRNQRSHHCLHRELKAY----TKQTIPSLLRDSRSCR 369 RP++ + RS+H K + + + + +LLRD SCR Sbjct: 289 RPIWNHNRSNHLALGSNKKFILKDSSEVLHTLLRDGESCR 328 >SB_1657| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 190 Score = 27.1 bits (57), Expect = 9.9 Identities = 15/50 (30%), Positives = 20/50 (40%) Frame = +3 Query: 69 LKQAKAGKPISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEPLLIDL 218 + Q A S + +G A + P P+S P QPP P DL Sbjct: 50 VSQPPADLSSSSTRVKDTSQIGPSAPTRPRLPVSTPRQPPPKPREKTDDL 99 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,658,450 Number of Sequences: 59808 Number of extensions: 274671 Number of successful extensions: 1203 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 984 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1176 length of database: 16,821,457 effective HSP length: 78 effective length of database: 12,156,433 effective search space used: 1239956166 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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