Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0489
         (542 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    27   0.16 
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    24   0.87 
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   3.5  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   4.6  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    21   6.1  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   6.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   8.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.1  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 26.6 bits (56), Expect = 0.16
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = +3

Query: 60  NDLLKQAKAGKPISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEPL 206
           ND  ++ +A     EE+      +    D   + P S PV P   P+PL
Sbjct: 404 NDARRRVEAALEAVEEERQREYGIRVERDPILTPPSSNPVSPVPSPDPL 452


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 24.2 bits (50), Expect = 0.87
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +3

Query: 330 DDTLTPERQQKLQAILKRQAEFKAAALHCKKSGDKALALEFLKTVKQFDVLV 485
           ++ L  E Q   + + KRQ+      L  +K  ++ +  +FL  +K+  VLV
Sbjct: 385 ENNLRGETQSNYREMEKRQSVPANDLLTTEKDNNEIVTAQFLNQLKKSSVLV 436


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = +3

Query: 429 DKALALEFLKTVKQFDVLVTAFKTTTEGMDFDLADLPT 542
           D+   +E +  V  FD     +   T+ ++  +A++PT
Sbjct: 13  DRFFFIEGMTNVLDFDYYFYDYSNRTQALESIIANIPT 50


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 538 GKSAKSKSIPSVVVLKAVTRTSNC 467
           GK   S S  ++ VL   TRT NC
Sbjct: 856 GKYMVSPSNDALFVLNGETRTINC 879


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +3

Query: 81  KAGKPISEEDIPPAVSLGKPADSTPSAPLSGPVQPPT 191
           KA K  S+ED+  A+   K      S     PV+P T
Sbjct: 307 KAMKGYSDEDLREAIDEFKTPMRNDSERNRSPVRPAT 343


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 11/39 (28%), Positives = 13/39 (33%)
 Frame = +3

Query: 87  GKPISEEDIPPAVSLGKPADSTPSAPLSGPVQPPTDPEP 203
           G   S    P A   G P + +   P  GP   P    P
Sbjct: 22  GPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 154 HQHHSLVQYNHQQT 195
           HQH + + Y HQQ+
Sbjct: 796 HQHAAQMIYGHQQS 809


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 387 AEFKAAALHCKKSGDKALALEF 452
           AEF    + C+  GDKA    +
Sbjct: 58  AEFDGTTVLCRVCGDKASGFHY 79


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,831
Number of Sequences: 438
Number of extensions: 3147
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)