Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0488
         (652 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0523 + 18310695-18311837,18312050-18312109,18312232-183123...    30   1.8  
01_06_1506 + 37830468-37830600,37830703-37830920,37832078-378325...    28   7.4  
09_04_0747 + 19892090-19893304,19893471-19893602,19894168-198942...    27   9.8  

>09_04_0523 +
           18310695-18311837,18312050-18312109,18312232-18312324,
           18312675-18312731,18313321-18313359
          Length = 463

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +3

Query: 447 KCLKLQSIAKNAKRTHENMV-YGFHGLRLTFIIFHFILDSKVH 572
           +C+ L    +N+K  H +   +GFH +   + + HF+ D  +H
Sbjct: 135 ECMHLVKPVRNSKTDHFSYYSFGFHPVTKQYKVMHFLRDEHLH 177


>01_06_1506 +
           37830468-37830600,37830703-37830920,37832078-37832529,
           37832595-37833402,37834986-37835073,37835196-37835299,
           37835402-37835483,37836670-37836923
          Length = 712

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 232 SIYTFYTQKFHFYPPKFHFTPFGVI 306
           +I+   T+ + FYPPK    PFG +
Sbjct: 230 AIFLIGTRSYRFYPPKSKGNPFGEV 254


>09_04_0747 +
           19892090-19893304,19893471-19893602,19894168-19894215,
           19894697-19894766,19894936-19894963,19896021-19896519
          Length = 663

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +3

Query: 447 KCLKLQSIAKNAKRTHENMV-YGFHGLRLTFIIFHFILDS 563
           +CL L   AKN    H +   +GFH L   + + HF+  S
Sbjct: 137 ECLHLAKPAKNLTDDHFSFYSFGFHPLTKEYKVTHFLASS 176


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,223,981
Number of Sequences: 37544
Number of extensions: 360446
Number of successful extensions: 660
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)