BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0486
(592 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY168921-1|AAO17581.1| 1388|Homo sapiens Est1p-like protein A pr... 137 2e-32
AY145883-1|AAN46114.1| 1419|Homo sapiens telomerase subunit EST1... 137 2e-32
AB018275-1|BAA34452.2| 1449|Homo sapiens KIAA0732 protein protein. 137 2e-32
BC064916-1|AAH64916.1| 511|Homo sapiens SMG6 protein protein. 101 1e-21
BC131611-1|AAI31612.1| 298|Homo sapiens keratin associated prot... 32 1.3
AF012872-1|AAD13352.1| 2044|Homo sapiens phosphatidylinositol 4-... 32 1.7
AB210002-1|BAE06084.1| 2121|Homo sapiens PIK4CA variant protein ... 32 1.7
AB076359-1|BAD01546.1| 298|Homo sapiens keratin associated prot... 32 1.7
CR457218-1|CAG33499.1| 99|Homo sapiens NICE-1 protein. 29 9.3
BC119710-1|AAI19711.1| 99|Homo sapiens cysteine-rich C-termina... 29 9.3
AL135842-4|CAI23351.1| 99|Homo sapiens cysteine-rich C-termina... 29 9.3
AK128275-1|BAC87363.1| 909|Homo sapiens protein ( Homo sapiens ... 29 9.3
AJ243662-1|CAB65093.1| 99|Homo sapiens NICE-1 protein protein. 29 9.3
AF043909-1|AAC19168.1| 1373|Homo sapiens gastric mucin protein. 29 9.3
>AY168921-1|AAO17581.1| 1388|Homo sapiens Est1p-like protein A
protein.
Length = 1388
Score = 137 bits (332), Expect = 2e-32
Identities = 80/201 (39%), Positives = 105/201 (52%), Gaps = 18/201 (8%)
Frame = +2
Query: 38 LSTMTSVELNKSFITSYLHVHGKLITKIGMETFHESAGLMLRQFRTLLHRQPLPMPAARL 217
L +++ +LNK FI S+LH HGKL T+IGMETF A +L++F+ LL P P+ + R+
Sbjct: 849 LGSLSPSDLNKRFILSFLHAHGKLFTRIGMETFPAVAEKVLKEFQVLLQHSPSPIGSTRM 908
Query: 218 LQLTALNMFAVETTGSTYKGCSGAE-RPAWLECALGVSLLMFGALVERCCALLPEPTHTQ 394
LQL +NMFAV S K C E R E A + L MF LV RC LL E Q
Sbjct: 909 LQLMTINMFAVH--NSQLKDCFSEECRSVIQEQAAALGLAMFSLLVRRCTCLLKESAKAQ 966
Query: 395 HHA-----------------DALQLLPSIKVWSDWMLCHSSVWNPPPSFTNFNVELESDS 523
+ D +LLPS+KVWSDWML + WNPPP+ + + D
Sbjct: 967 LSSPEDQDDQDDIKVSSFVPDLKELLPSVKVWSDWMLGYPDTWNPPPTSLDLPSHVAVDV 1026
Query: 524 WDWLAKLMNILEILDDKTIKL 586
W LA NIL ++ + L
Sbjct: 1027 WSTLADFCNILTAVNQSEVPL 1047
>AY145883-1|AAN46114.1| 1419|Homo sapiens telomerase subunit EST1A
protein.
Length = 1419
Score = 137 bits (332), Expect = 2e-32
Identities = 80/201 (39%), Positives = 105/201 (52%), Gaps = 18/201 (8%)
Frame = +2
Query: 38 LSTMTSVELNKSFITSYLHVHGKLITKIGMETFHESAGLMLRQFRTLLHRQPLPMPAARL 217
L +++ +LNK FI S+LH HGKL T+IGMETF A +L++F+ LL P P+ + R+
Sbjct: 880 LGSLSPSDLNKRFILSFLHAHGKLFTRIGMETFPAVAEKVLKEFQVLLQHSPSPIGSTRM 939
Query: 218 LQLTALNMFAVETTGSTYKGCSGAE-RPAWLECALGVSLLMFGALVERCCALLPEPTHTQ 394
LQL +NMFAV S K C E R E A + L MF LV RC LL E Q
Sbjct: 940 LQLMTINMFAVH--NSQLKDCFSEECRSVIQEQAAALGLAMFSLLVRRCTCLLKESAKAQ 997
Query: 395 HHA-----------------DALQLLPSIKVWSDWMLCHSSVWNPPPSFTNFNVELESDS 523
+ D +LLPS+KVWSDWML + WNPPP+ + + D
Sbjct: 998 LSSPEDQDDQDDIKVSSFVPDLKELLPSVKVWSDWMLGYPDTWNPPPTSLDLPSHVAVDV 1057
Query: 524 WDWLAKLMNILEILDDKTIKL 586
W LA NIL ++ + L
Sbjct: 1058 WSTLADFCNILTAVNQSEVPL 1078
>AB018275-1|BAA34452.2| 1449|Homo sapiens KIAA0732 protein protein.
Length = 1449
Score = 137 bits (332), Expect = 2e-32
Identities = 80/201 (39%), Positives = 105/201 (52%), Gaps = 18/201 (8%)
Frame = +2
Query: 38 LSTMTSVELNKSFITSYLHVHGKLITKIGMETFHESAGLMLRQFRTLLHRQPLPMPAARL 217
L +++ +LNK FI S+LH HGKL T+IGMETF A +L++F+ LL P P+ + R+
Sbjct: 910 LGSLSPSDLNKRFILSFLHAHGKLFTRIGMETFPAVAEKVLKEFQVLLQHSPSPIGSTRM 969
Query: 218 LQLTALNMFAVETTGSTYKGCSGAE-RPAWLECALGVSLLMFGALVERCCALLPEPTHTQ 394
LQL +NMFAV S K C E R E A + L MF LV RC LL E Q
Sbjct: 970 LQLMTINMFAVH--NSQLKDCFSEECRSVIQEQAAALGLAMFSLLVRRCTCLLKESAKAQ 1027
Query: 395 HHA-----------------DALQLLPSIKVWSDWMLCHSSVWNPPPSFTNFNVELESDS 523
+ D +LLPS+KVWSDWML + WNPPP+ + + D
Sbjct: 1028 LSSPEDQDDQDDIKVSSFVPDLKELLPSVKVWSDWMLGYPDTWNPPPTSLDLPSHVAVDV 1087
Query: 524 WDWLAKLMNILEILDDKTIKL 586
W LA NIL ++ + L
Sbjct: 1088 WSTLADFCNILTAVNQSEVPL 1108
>BC064916-1|AAH64916.1| 511|Homo sapiens SMG6 protein protein.
Length = 511
Score = 101 bits (243), Expect = 1e-21
Identities = 64/172 (37%), Positives = 83/172 (48%), Gaps = 18/172 (10%)
Frame = +2
Query: 125 METFHESAGLMLRQFRTLLHRQPLPMPAARLLQLTALNMFAVETTGSTYKGCSGAE-RPA 301
METF A +L++F+ LL P P+ + R+LQL +NMFAV S K C E R
Sbjct: 1 METFPAVAEKVLKEFQVLLQHSPSPIGSTRMLQLMTINMFAVH--NSQLKDCFSEECRSV 58
Query: 302 WLECALGVSLLMFGALVERCCALLPEPTHTQHHA-----------------DALQLLPSI 430
E A + L MF LV RC LL E Q + D +LLPS+
Sbjct: 59 IQEQAAALGLAMFSLLVRRCTCLLKESAKAQLSSPEDQDDQDDIKVSSFVPDLKELLPSV 118
Query: 431 KVWSDWMLCHSSVWNPPPSFTNFNVELESDSWDWLAKLMNILEILDDKTIKL 586
KVWSDWML + WNPPP+ + + D W LA NIL ++ + L
Sbjct: 119 KVWSDWMLGYPDTWNPPPTSLDLPSHVAVDVWSTLADFCNILTAVNQSEVPL 170
>BC131611-1|AAI31612.1| 298|Homo sapiens keratin associated protein
10-11 protein.
Length = 298
Score = 32.3 bits (70), Expect = 1.3
Identities = 27/112 (24%), Positives = 39/112 (34%), Gaps = 4/112 (3%)
Frame = +3
Query: 129 KPFTKVPASCCGSSARCCTDSPCRCRPLDSFS*PHSTCLQLXXXXXXXXXXXXXXDQPGW 308
KP VP CCG+++ CC S C+ S S + C+ +
Sbjct: 111 KPVCCVPV-CCGAASSCCRQSSCQPACCASSSCQPACCVPVCCKPVCCVSTCSEDSSSCC 169
Query: 309 SALSAYPCSCSERSWKDA--VRYCRNQL--TPSTTLMPCSYYPR*RCGPTGC 452
S P C+ S++ A V C + P + CS RC C
Sbjct: 170 QQSSCQPACCTSSSYQQACCVPVCCKTVYCKPICCVPVCSRASSSRCQQPSC 221
>AF012872-1|AAD13352.1| 2044|Homo sapiens phosphatidylinositol
4-kinase 230 protein.
Length = 2044
Score = 31.9 bits (69), Expect = 1.7
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +2
Query: 383 THTQHHADALQLLPSIKVWS---DWMLCHSSVWNPPPSFTNFNVELESDSWDWL 535
+H QH+ A+ L ++ + S D L H W P F +E W+WL
Sbjct: 1126 SHPQHYTQAMFKLTAMLISSKDCDPQLLHHLCWGPLRMFNEHGMETALACWEWL 1179
>AB210002-1|BAE06084.1| 2121|Homo sapiens PIK4CA variant protein
protein.
Length = 2121
Score = 31.9 bits (69), Expect = 1.7
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +2
Query: 383 THTQHHADALQLLPSIKVWS---DWMLCHSSVWNPPPSFTNFNVELESDSWDWL 535
+H QH+ A+ L ++ + S D L H W P F +E W+WL
Sbjct: 1203 SHPQHYTQAMFKLTAMLISSKDCDPQLLHHLCWGPLRMFNEHGMETALACWEWL 1256
>AB076359-1|BAD01546.1| 298|Homo sapiens keratin associated protein
protein.
Length = 298
Score = 31.9 bits (69), Expect = 1.7
Identities = 27/112 (24%), Positives = 39/112 (34%), Gaps = 4/112 (3%)
Frame = +3
Query: 129 KPFTKVPASCCGSSARCCTDSPCRCRPLDSFS*PHSTCLQLXXXXXXXXXXXXXXDQPGW 308
KP VP CCG+++ CC S C+ S S + C+ +
Sbjct: 111 KPVCCVPV-CCGAASSCCRQSSCQPACCASSSCQPACCVPVCCKPVCCVSTCSEDSSSCC 169
Query: 309 SALSAYPCSCSERSWKDA--VRYCRNQL--TPSTTLMPCSYYPR*RCGPTGC 452
S P C+ S++ A V C + P + CS RC C
Sbjct: 170 QQSSCQPACCTSSSYQQACCVPVCCKTVYCKPICCVPVCSRASYSRCQQPSC 221
>CR457218-1|CAG33499.1| 99|Homo sapiens NICE-1 protein.
Length = 99
Score = 29.5 bits (63), Expect = 9.3
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 150 ASCCGSSARCCTDSPC 197
+SCCGS CC DS C
Sbjct: 37 SSCCGSGRGCCGDSGC 52
>BC119710-1|AAI19711.1| 99|Homo sapiens cysteine-rich C-terminal 1
protein.
Length = 99
Score = 29.5 bits (63), Expect = 9.3
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 150 ASCCGSSARCCTDSPC 197
+SCCGS CC DS C
Sbjct: 37 SSCCGSGRGCCGDSGC 52
>AL135842-4|CAI23351.1| 99|Homo sapiens cysteine-rich C-terminal 1
protein.
Length = 99
Score = 29.5 bits (63), Expect = 9.3
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 150 ASCCGSSARCCTDSPC 197
+SCCGS CC DS C
Sbjct: 37 SSCCGSGRGCCGDSGC 52
>AK128275-1|BAC87363.1| 909|Homo sapiens protein ( Homo sapiens
cDNA FLJ46412 fis, clone THYMU3011534. ).
Length = 909
Score = 29.5 bits (63), Expect = 9.3
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Frame = +2
Query: 413 QLLPSIKVWSDWMLCHSSV-------WNPPPSFTNFNVELESDSWDWLAKLMNILEILDD 571
++LPS W + +L ++ +NPP SFT F+V L S + D+ + I +L
Sbjct: 34 RMLPSGLSWHEQILYFLNIADEPVLGYNPPTSFTTFHVHLWSCALDYRPLYLPIRSLLTV 93
Query: 572 KTIKLEN 592
+T + +
Sbjct: 94 ETFSVSS 100
>AJ243662-1|CAB65093.1| 99|Homo sapiens NICE-1 protein protein.
Length = 99
Score = 29.5 bits (63), Expect = 9.3
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 150 ASCCGSSARCCTDSPC 197
+SCCGS CC DS C
Sbjct: 37 SSCCGSGRGCCGDSGC 52
>AF043909-1|AAC19168.1| 1373|Homo sapiens gastric mucin protein.
Length = 1373
Score = 29.5 bits (63), Expect = 9.3
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -1
Query: 307 QPGWSLCT-GTTFIRGTGRLNCKHVECGQLKESSGRHRQGLSVQQRAELPQHEAGT 143
+PGW+L + GTT +L+ K+ L G R QRA LPQH+A T
Sbjct: 181 KPGWALSSCGTTMTACCWKLDTKYAN-KNLWALWGLQRDARG--QRAPLPQHQADT 233
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,344,707
Number of Sequences: 237096
Number of extensions: 2023308
Number of successful extensions: 9015
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8999
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -