Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0485
         (436 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    26   0.14 
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   2.9  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   2.9  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   2.9  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   3.8  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 26.2 bits (55), Expect = 0.14
 Identities = 23/72 (31%), Positives = 36/72 (50%)
 Frame = +1

Query: 211 PALQMLSNLIRTSTTSMTSVPKPLKFLREHYPALKQVYEKITDEKTKKFCADVISVLAMG 390
           PALQ  ++LI     ++      L  L E +  +K  Y K+TD K K+F    + VL + 
Sbjct: 50  PALQYCTHLIY-GYAAIDEETYKLTPLNEQFDVIKDNYRKVTDLK-KRF--PKLKVL-LS 104

Query: 391 VSGTLEVAEKRE 426
           V G  +V+ + E
Sbjct: 105 VGGNADVSGQDE 116


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = +1

Query: 337 DEKT--KKFCADVISVLAMGVSGTLEVAEKRECLK 435
           D KT  KK+  D+IS  A G++      +  E LK
Sbjct: 165 DVKTAMKKYSVDIISTCAFGINTYCFRNDNSEILK 199


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 124 HHLEPLRAQLFP 89
           HHLEP R Q+ P
Sbjct: 13  HHLEPHRMQIKP 24


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 124 HHLEPLRAQLFP 89
           HHLEP R Q+ P
Sbjct: 13  HHLEPHRMQIKP 24


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 289 LREHYPALKQVYEKI 333
           L EH   L+QV+EK+
Sbjct: 468 LNEHLEHLRQVFEKL 482


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,392
Number of Sequences: 336
Number of extensions: 1198
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)