Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0483
         (301 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000499BEE Cluster: Ras guanine nucleotide exchange ...    35   0.31 
UniRef50_Q8AB38 Cluster: Putative uncharacterized protein; n=1; ...    33   1.7  
UniRef50_Q2UCH5 Cluster: Predicted protein; n=1; Aspergillus ory...    31   5.1  
UniRef50_A5HY94 Cluster: Putative membrane protein precursor; n=...    31   6.7  
UniRef50_Q4YT55 Cluster: Vesicle transport protein, putative; n=...    30   8.9  

>UniRef50_UPI0000499BEE Cluster: Ras guanine nucleotide exchange
            factor; n=1; Entamoeba histolytica HM-1:IMSS|Rep: Ras
            guanine nucleotide exchange factor - Entamoeba
            histolytica HM-1:IMSS
          Length = 1214

 Score = 35.1 bits (77), Expect = 0.31
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -1

Query: 268  STSRLKVIITMI-SXIPLVQEIKITLQFSINNLEI*SKFCLTTHEAYLFIDTENQ 107
            STS   +I+  I   I L+ +IKI+ Q+S+ N+    + C  T+E Y F + E Q
Sbjct: 904  STSNANIILQYILDHIDLLNDIKISSQYSLPNVYNDQRTCFFTNEDYSFFNDEVQ 958


>UniRef50_Q8AB38 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides thetaiotaomicron|Rep: Putative
           uncharacterized protein - Bacteroides thetaiotaomicron
          Length = 503

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -3

Query: 266 DLTSQGHYYYDLXYTPSTRNKNY 198
           +L  +GHYYYDL  T    N+NY
Sbjct: 444 ELIGEGHYYYDLVRTGKVYNRNY 466


>UniRef50_Q2UCH5 Cluster: Predicted protein; n=1; Aspergillus
           oryzae|Rep: Predicted protein - Aspergillus oryzae
          Length = 315

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -3

Query: 137 SVLIHRHRESNARSDSSQSTHNYVPSKTILKKKTFVPRAE 18
           S++I +     AR  +++ T   VP++T+ KK++F  R E
Sbjct: 247 SIVIAKRNVEEARRAATEGTSLMVPTRTVCKKRSFTDRDE 286


>UniRef50_A5HY94 Cluster: Putative membrane protein precursor; n=4;
           Clostridium botulinum|Rep: Putative membrane protein
           precursor - Clostridium botulinum A str. ATCC 3502
          Length = 214

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 11/43 (25%), Positives = 27/43 (62%)
 Frame = -1

Query: 301 LCLXGKRPQYKSTSRLKVIITMISXIPLVQEIKITLQFSINNL 173
           +C+ G +  +K+  ++K+I  +I  + +++ I +TL   +NN+
Sbjct: 17  ICMQGGKATFKAPRKIKIISIIIYFLMILKFISLTLLVFVNNI 59


>UniRef50_Q4YT55 Cluster: Vesicle transport protein, putative; n=8;
           Plasmodium|Rep: Vesicle transport protein, putative -
           Plasmodium berghei
          Length = 966

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -3

Query: 107 NARSDSSQSTHNYVPSKTILKKKTFVPRAEFLQP 6
           NA S   +S+ NY+P+   LK+KT VP    +QP
Sbjct: 182 NAFSHFVKSSVNYMPANGTLKQKTHVPLGFTIQP 215


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 255,064,329
Number of Sequences: 1657284
Number of extensions: 3846207
Number of successful extensions: 8383
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8381
length of database: 575,637,011
effective HSP length: 76
effective length of database: 449,683,427
effective search space used: 10342718821
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)