Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0483
         (301 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_1063 + 30048724-30048753,30049036-30049175,30049282-300493...    27   3.6  

>03_05_1063 +
           30048724-30048753,30049036-30049175,30049282-30049336,
           30049419-30049526,30050190-30050288,30050380-30050457,
           30050558-30050635,30051875-30051949,30052117-30052217,
           30052502-30052527,30053224-30053297,30053358-30053379,
           30054108-30054223,30054361-30054618,30054716-30054832,
           30055649-30055699,30055859-30056086,30056550-30056648,
           30056823-30056999,30057298-30057417
          Length = 683

 Score = 26.6 bits (56), Expect = 3.6
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -3

Query: 131 LIHRHRESNARSDSSQSTHNYVPSKTILKKKTFVPRAEFLQ 9
           LI RHR S++   ++ S  N +    + +  T   R++FL+
Sbjct: 491 LIRRHRHSDSTGSTTSSRSNPMREDMLNRSNTHRARSQFLE 531


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,584,162
Number of Sequences: 37544
Number of extensions: 93501
Number of successful extensions: 180
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 339576272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)