Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0483
         (301 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains...    26   4.1  
At5g52500.1 68418.m06513 expressed protein strong similarity to ...    25   7.1  
At3g22380.1 68416.m02825 expressed protein                             25   9.4  
At2g43850.2 68415.m05452 ankyrin protein kinase, putative (APK1)...    25   9.4  
At2g43850.1 68415.m05451 ankyrin protein kinase, putative (APK1)...    25   9.4  

>At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains
           ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
          Length = 1340

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -3

Query: 131 LIHRHRESNARSDSSQSTHNYVPSKTILKKK 39
           ++ +  E+   SD S   +   P+KTI+KKK
Sbjct: 802 IVKKVAETGDTSDPSAKANEQTPAKTIVKKK 832


>At5g52500.1 68418.m06513 expressed protein strong similarity to
           unknown protein (emb|CAB68146.1)
          Length = 363

 Score = 25.4 bits (53), Expect = 7.1
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 149 NNTRSVLIHRHRESNARSDSSQSTH 75
           NN+   L+H HR  +  S SS S H
Sbjct: 163 NNSFLKLVHVHRNDSMTSSSSSSEH 187


>At3g22380.1 68416.m02825 expressed protein
          Length = 1550

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 116 RESNARSDSSQSTHNYVPSKTILKK 42
           RESNA  DS +  +N    +TIL K
Sbjct: 440 RESNASLDSEKKENNLSKDETILPK 464


>At2g43850.2 68415.m05452 ankyrin protein kinase, putative (APK1)
           similar to ankyrin-kinase [Medicago truncatula]
           gi|18700701|gb|AAL78674;contains Pfam profile PF00069:
           Protein kinase domain; contains Pfam profile PF00023:
           Ankyrin repeat
          Length = 479

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 301 LCLXGKRPQYKSTSR 257
           +CL GKRP +K+ SR
Sbjct: 412 MCLEGKRPVFKTKSR 426


>At2g43850.1 68415.m05451 ankyrin protein kinase, putative (APK1)
           similar to ankyrin-kinase [Medicago truncatula]
           gi|18700701|gb|AAL78674;contains Pfam profile PF00069:
           Protein kinase domain; contains Pfam profile PF00023:
           Ankyrin repeat
          Length = 479

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 301 LCLXGKRPQYKSTSR 257
           +CL GKRP +K+ SR
Sbjct: 412 MCLEGKRPVFKTKSR 426


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,517,849
Number of Sequences: 28952
Number of extensions: 83073
Number of successful extensions: 156
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 12,070,560
effective HSP length: 70
effective length of database: 10,043,920
effective search space used: 291273680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)