Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0482
         (593 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    24   1.3  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    24   1.3  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    24   1.3  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    24   1.3  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.0  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    23   3.0  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   3.0  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    22   3.9  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   5.2  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   5.2  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   9.1  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    21   9.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   9.1  

>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 43  SKHRQSLINNKYNVDCKQYYSTNKYL 120
           + ++ +  NN YN +CK+ Y    Y+
Sbjct: 94  NNYKYNYNNNNYNNNCKKLYYNINYI 119


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 43  SKHRQSLINNKYNVDCKQYYSTNKYL 120
           + ++ +  NN YN +CK+ Y    Y+
Sbjct: 94  NNYKYNYNNNNYNNNCKKLYYNINYI 119


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 43  SKHRQSLINNKYNVDCKQYYSTNKYL 120
           + ++ +  NN YN +CK+ Y    Y+
Sbjct: 94  NNYKYNYNNNNYNNNCKKLYYNINYI 119


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 43  SKHRQSLINNKYNVDCKQYYSTNKYL 120
           + ++ +  NN YN +CK+ Y    Y+
Sbjct: 94  NNYKYNYNNNNYNNNCKKLYYNINYI 119


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like
          receptor 2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 28 TRELVSKHRQSLINNKYNVD 87
          T E+   H++ LI+N Y +D
Sbjct: 9  TMEISKNHKEQLISNDYILD 28



 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 248 VLLTLVS*EHNNKTTNVSSNCLFNV 174
           +L+T V+  +NN      + CL N+
Sbjct: 467 ILMTTVNEGNNNMAATYMNECLLNI 491


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 64  INNKYNVDCKQYYSTNKY 117
           I+N Y  DC   YST  +
Sbjct: 183 ISNNYTTDCTIEYSTGNF 200


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 61  LINNKYNVDCKQYYSTNKY 117
           L+ N Y  DC Q YST  +
Sbjct: 214 LVKN-YTADCTQVYSTGNF 231


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +1

Query: 256 KSPFVSSCKLHIVLCNYRNSHASSATKQYYKNKQ 357
           K P  + CK      N   +H S   +Q+ KN+Q
Sbjct: 31  KEPICNICKRVYSSLNSLRNHKSIYHRQHSKNEQ 64


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 67  NNKYNVDCKQYY 102
           NN YN +CK+ Y
Sbjct: 344 NNNYNNNCKKLY 355


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 582 FCKNLL*SHIHPSRSVHVAC 523
           F KNL  + I   R +HV+C
Sbjct: 102 FMKNLELTQIRRDRGLHVSC 121


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 67  NNKYNVDCKQYYSTNKY 117
           N KYN + K  Y+ N Y
Sbjct: 95  NYKYNYNNKYNYNNNNY 111


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 232 FRKSIIIRLQMSPATAFSMCNCYEI 158
           FR+SI  ++Q  P T    C+   I
Sbjct: 42  FRRSIQQKIQYRPCTKNQQCSILRI 66


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 232 FRKSIIIRLQMSPATAFSMCNCYEI 158
           FR+SI  ++Q  P T    C+   I
Sbjct: 91  FRRSIQQKIQYRPCTKNQQCSILRI 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,304
Number of Sequences: 438
Number of extensions: 3415
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)