Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0479
(548 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0662 + 30987187-30987277,30987825-30990214 204 4e-53
04_01_0103 + 1082077-1082167,1083037-1085477 197 5e-51
02_04_0017 + 18937774-18937864,18938505-18940945 196 7e-51
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 174 3e-44
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 146 8e-36
03_05_0511 + 25056018-25059107 116 1e-26
02_04_0148 - 20198407-20201424 109 1e-24
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 64 5e-11
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 55 4e-08
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 32 0.35
06_01_0244 - 1844161-1844241,1844356-1844394,1844510-1844617,184... 30 1.4
07_03_0896 + 22373348-22374946 29 2.4
11_08_0089 - 28288129-28288832,28290702-28290831,28291563-282918... 29 3.2
07_03_1219 + 24960043-24960133,24960304-24960336,24962258-249624... 29 3.2
10_08_0081 + 14710478-14710822 28 4.3
04_04_1081 - 30700791-30700904,30701011-30703053,30703126-30704376 28 4.3
07_01_0244 + 1786009-1788048 28 5.6
02_02_0340 + 9135846-9138377 28 5.6
01_07_0303 + 42615578-42615709,42616273-42616312,42616393-426164... 28 5.6
09_02_0302 - 7086017-7086124,7086125-7086796,7087511-7088070,708... 27 7.5
06_02_0251 - 13478902-13478952,13478989-13479055,13479168-134793... 27 7.5
06_01_0993 + 7710016-7710977,7711081-7711316,7711422-7711501,771... 27 7.5
07_01_0212 + 1571631-1572149 27 9.9
02_04_0640 - 24664841-24664855,24664895-24664978,24665232-246653... 27 9.9
02_02_0162 + 7315562-7315846,7316432-7316662,7317002-7317144,731... 27 9.9
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 204 bits (498), Expect = 4e-53
Identities = 104/154 (67%), Positives = 123/154 (79%), Gaps = 3/154 (1%)
Frame = +3
Query: 96 LVGVDQFLVKTGTITTFK--NAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAK 269
+VG+DQF+ K T+T K +A +K MKFSVSPVVRVAV+ K +DLPKLVEGLKRLAK
Sbjct: 450 MVGLDQFITKNATLTNEKEVDACPIKAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAK 509
Query: 270 SDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVAEESD 446
SDPMV C EESGEHI+AGAGELHLEICLKDL+ED I S PVVS+RETV E+S
Sbjct: 510 SDPMVLCTVEESGEHIIAGAGELHLEICLKDLQEDFMGGAEITVSPPVVSFRETVLEKSC 569
Query: 447 QLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRV 548
+ +SKSPNKHNRL+M+A+PM +GLPE IDEGR+
Sbjct: 570 RTVMSKSPNKHNRLYMEARPMEEGLPEAIDEGRI 603
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 14 RNSARGILMMGRYVEAIEDVPSGNMV 91
+N R ++ MG+ E++E VP GN V
Sbjct: 423 KNVQRTVIWMGKKQESVEGVPCGNTV 448
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 197 bits (480), Expect = 5e-51
Identities = 100/154 (64%), Positives = 121/154 (78%), Gaps = 3/154 (1%)
Frame = +3
Query: 96 LVGVDQFLVKTGTITTFKNAHN--MKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAK 269
+VG+DQF+ K T+T K A ++ MKFSVSPVVRVAV+ K +DLPKLVEGLKRLAK
Sbjct: 454 MVGLDQFITKNATLTNEKEADACPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAK 513
Query: 270 SDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVAEESD 446
SDPMV C EESGEHI+AGAGELHLEICLKDL+ED I S PVVS+RETV E+S
Sbjct: 514 SDPMVLCTIEESGEHIIAGAGELHLEICLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSC 573
Query: 447 QLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRV 548
+ +SKSPNKHNRL+M+A+P+ +GL E ID+GR+
Sbjct: 574 RTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI 607
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 26 RGILMMGRYVEAIEDVPSGNMV 91
R ++ MG+ E++EDVP GN V
Sbjct: 431 RTVIWMGKKQESVEDVPCGNTV 452
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 196 bits (479), Expect = 7e-51
Identities = 100/154 (64%), Positives = 122/154 (79%), Gaps = 3/154 (1%)
Frame = +3
Query: 96 LVGVDQFLVKTGTITTFK--NAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAK 269
+VG+DQF+ K T+T K +A ++ MKFSVSPVVRVAV+ K +DLPKLVEGLKRLAK
Sbjct: 454 MVGLDQFITKNATLTNEKESDACPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAK 513
Query: 270 SDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVAEESD 446
SDPMV C EESGEHI+AGAGELHLEICLKDL+ED I S PVVS+RETV E+S
Sbjct: 514 SDPMVLCTIEESGEHIIAGAGELHLEICLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSC 573
Query: 447 QLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRV 548
+ +SKSPNKHNRL+M+A+P+ +GL E ID+GR+
Sbjct: 574 RTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI 607
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 26 RGILMMGRYVEAIEDVPSGNMV 91
R ++ MG+ E++EDVP GN V
Sbjct: 431 RTVIWMGKKQESVEDVPCGNTV 452
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 174 bits (424), Expect = 3e-44
Identities = 84/141 (59%), Positives = 109/141 (77%), Gaps = 3/141 (2%)
Frame = +3
Query: 96 LVGVDQFLVKTGTITTFK--NAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAK 269
+VG+DQF+ K T+T K +AH +K MKFSVSPVVR +V KN ++LPKLVEGLKRLAK
Sbjct: 456 MVGLDQFITKNATLTDEKAVDAHPIKAMKFSVSPVVRKSVACKNASELPKLVEGLKRLAK 515
Query: 270 SDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVAEESD 446
SDP+V C EESGEH++AG G+LHLEIC+KDL+ED I P+++YRETV + S
Sbjct: 516 SDPLVVCTIEESGEHVIAGVGQLHLEICIKDLQEDFMGGAEIIVGPPIITYRETVTKNSC 575
Query: 447 QLCLSKSPNKHNRLFMKAQPM 509
+ +SKSPNKHNRL+M+A+P+
Sbjct: 576 RTVMSKSPNKHNRLYMEARPL 596
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 26 RGILMMGRYVEAIEDVPSGNMV 91
R ++ MG+ E+++DVP GN V
Sbjct: 433 RTVIWMGKKQESVDDVPCGNTV 454
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 146 bits (355), Expect = 8e-36
Identities = 68/161 (42%), Positives = 108/161 (67%), Gaps = 3/161 (1%)
Frame = +3
Query: 75 PLVTWCGLVGVDQFLVKTGTITTFK---NAHNMKVMKFSVSPVVRVAVEPKNPADLPKLV 245
P +W + GVD ++KT TI K + + + ++F+ PVV++A EP NP++LPK+V
Sbjct: 569 PAGSWVLIEGVDASIMKTATICPMKMDEDVYIFRPLRFNTLPVVKIAAEPLNPSELPKMV 628
Query: 246 EGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRE 425
EGL++++KS P+ EESGEH + G GEL+L+ +KDL E ++ + +K +DPVV++ E
Sbjct: 629 EGLRKISKSYPLAVTKVEESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVTFCE 688
Query: 426 TVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRV 548
TV + S C +++PNK N++ M A+P+ GL EDI+ G V
Sbjct: 689 TVVDTSSMKCFAETPNKRNKITMVAEPLEKGLAEDIENGLV 729
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 116 bits (279), Expect = 1e-26
Identities = 57/126 (45%), Positives = 84/126 (66%), Gaps = 1/126 (0%)
Frame = +3
Query: 102 GVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPM 281
G+ ++K+ T+++ KN M F VSP+++VA+EP NPADL LV+GLK L ++DP
Sbjct: 507 GLGHHILKSATLSSTKNCWPFSSMMFQVSPMLKVAIEPSNPADLGALVKGLKLLNRADPF 566
Query: 282 VQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQLCLS 461
V+ + GEH++A AGE+HLE C KDLEE A + + SDP+VS++ET+ E L S
Sbjct: 567 VEYTVSQRGEHVLAAAGEIHLERCKKDLEERFAKVKLVVSDPLVSFKETIEGEGLALIES 626
Query: 462 -KSPNK 476
K+P +
Sbjct: 627 LKAPRE 632
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 109 bits (263), Expect = 1e-24
Identities = 48/113 (42%), Positives = 78/113 (69%)
Frame = +3
Query: 102 GVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPM 281
G+ ++K T+++ KN M F VSP+++VA+EP NP+DL LV+GLK L ++DP
Sbjct: 487 GLGHHVLKNATLSSTKNCQPFSGMMFQVSPMLKVAIEPSNPSDLGALVKGLKLLNQADPF 546
Query: 282 VQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEE 440
++ E GEH++A AGE+HLE C+K+L+E A + ++ S P+VS+++T+ E
Sbjct: 547 IEYTVSERGEHVLAAAGEIHLEHCIKNLQERFARVQLEVSKPLVSFKDTIQGE 599
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 64.5 bits (150), Expect = 5e-11
Identities = 32/87 (36%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Frame = +3
Query: 189 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQ-CINEESGEHIVAGAGELHLEICLKDL 365
PV++VA+EPK AD K+ GL +LA+ DP +EE+ + ++ G GELHL+I + L
Sbjct: 457 PVIKVAIEPKTKADADKMATGLIKLAQEDPSFHFSRDEETNQTVIEGMGELHLDIIVDRL 516
Query: 366 EEDHACIPIKKSDPVVSYRETVAEESD 446
+ + + P V+YRE++++ S+
Sbjct: 517 KREFR-VEANVGAPQVNYRESISKISE 542
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 54.8 bits (126), Expect = 4e-08
Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Frame = +3
Query: 189 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDL 365
PV+ +AV P + + + L R K DP + ++ ESGE I++G GELHL+I ++ +
Sbjct: 477 PVMSLAVSPISKDSGGQFSKALNRFQKEDPTFRVGLDPESGETIISGMGELHLDIYVERI 536
Query: 366 EEDHACIPIKKSDPVVSYRETVAE--ESDQLCLSKS--PNKHNRLFMKAQPMP 512
++ + K P V++RET+ + E D L +S ++ R+ +P+P
Sbjct: 537 RREYK-VDAKVGKPRVNFRETITQRAEFDYLHKKQSGGQGQYGRVCGYIEPLP 588
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 31.9 bits (69), Expect = 0.35
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = -2
Query: 331 PAPATMCSPDSSLIHCTMGSDLARRLRPSTSLGRSAGFLGSTATRTT 191
P+P+ D S C GS + + P+T+ AG S T +T
Sbjct: 342 PSPSEAIGTDGSSTSCGTGSSVTNAIAPATTTSTFAGLFASVTTSST 388
>06_01_0244 -
1844161-1844241,1844356-1844394,1844510-1844617,
1844638-1844685,1845058-1845111,1845214-1845268,
1845442-1845522,1846238-1846615,1847196-1847401
Length = 349
Score = 29.9 bits (64), Expect = 1.4
Identities = 27/87 (31%), Positives = 33/87 (37%)
Frame = +3
Query: 210 EPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIP 389
+P +PA LP EGL R A Q + E V GEL I LK+ I
Sbjct: 59 KPCDPAPLPTQCEGLLRGASEPESAQALQEPD----VLSVGELLGAIALKE-----PIIS 109
Query: 390 IKKSDPVVSYRETVAEESDQLCLSKSP 470
S P + + CLS SP
Sbjct: 110 SPSSSPQAVPEDNIDAVPSGCCLSSSP 136
>07_03_0896 + 22373348-22374946
Length = 532
Score = 29.1 bits (62), Expect = 2.4
Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 3/83 (3%)
Frame = -2
Query: 388 GMQAWSSSRSLRQISRWS--SPAPATMCSPDSSLI-HCTMGSDLARRLRPSTSLGRSAGF 218
G AW +S W+ PA + P SS C G L L S LGR
Sbjct: 92 GAWAWDRPAETSVVSEWALKCAGPALVSLPASSFFAGCLAGGFLLTTLADSL-LGRRKML 150
Query: 217 LGSTATRTTGDTLNFITFMLWAF 149
L S A+ + L + +WA+
Sbjct: 151 LVSLASMSVAGVLTAFSPNVWAY 173
>11_08_0089 -
28288129-28288832,28290702-28290831,28291563-28291856,
28292000-28292098,28292199-28292285,28292524-28292805
Length = 531
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = -2
Query: 220 FLGSTATRTTGDTLNFITFMLWAFLK----VVMVPVLTKN*STPTRPHHVTRGHILNSFN 53
FL T T TT L + + +FL+ ++ LT + +TP P+H+ +++ F+
Sbjct: 193 FLPVTTTTTTTRALLLRSLLDPSFLRFDASLLAASALTLSSTTPQHPNHLLLNRLIHPFS 252
Query: 52 ITSH 41
T H
Sbjct: 253 QTDH 256
>07_03_1219 +
24960043-24960133,24960304-24960336,24962258-24962486,
24963183-24963309,24963530-24963869,24964806-24965095
Length = 369
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 438 ESDQLCLSKSPNKHNRLFMKAQPMPDGLPE 527
E + LCL PN+H + + A+ +P LPE
Sbjct: 42 EKENLCLYGFPNEHWEVNLPAEEVPPELPE 71
>10_08_0081 + 14710478-14710822
Length = 114
Score = 28.3 bits (60), Expect = 4.3
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -2
Query: 472 LGDFERQSWSDSSATVSRYDTTGSDFLIGMQAWSS-SRSLRQISRWSSPAPAT 317
+ R SWSD V+R T+ + + W+ R +R S WSS AP T
Sbjct: 1 MSHLRRLSWSDQ--VVARQPTSEEEDVDAGGRWTEVRRKVRPHSWWSSNAPTT 51
>04_04_1081 - 30700791-30700904,30701011-30703053,30703126-30704376
Length = 1135
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/71 (23%), Positives = 30/71 (42%)
Frame = -2
Query: 349 ISRWSSPAPATMCSPDSSLIHCTMGSDLARRLRPSTSLGRSAGFLGSTATRTTGDTLNFI 170
++ W+ PAP T+ P++S + ++ SL G T T GD L ++
Sbjct: 1040 VAEWT-PAPETVSIPEASTDPSQLPHTAHWVMQFDGSLSLQGAGAGVTLTSPNGDVLRYL 1098
Query: 169 TFMLWAFLKVV 137
W+ + V
Sbjct: 1099 ATPSWSLTRSV 1109
>07_01_0244 + 1786009-1788048
Length = 679
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 512 RHGLSLHEQTVVLVGRL*ETELVRFLSY 429
RHG++ ++++GRL LVR L Y
Sbjct: 397 RHGMTQFTAEIIILGRLRHRNLVRLLGY 424
>02_02_0340 + 9135846-9138377
Length = 843
Score = 27.9 bits (59), Expect = 5.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -2
Query: 412 TTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCS 308
TTGSD L G+Q + R+L I+ P +CS
Sbjct: 801 TTGSDVLDGLQPHYNLRALGIINHGGPTGPGWLCS 835
>01_07_0303 +
42615578-42615709,42616273-42616312,42616393-42616477,
42616634-42616813,42618274-42618354,42618890-42619011,
42619867-42620723,42621656-42621897,42622107-42622200,
42622306-42622476,42622695-42622740,42624101-42624111,
42624141-42624392
Length = 770
Score = 27.9 bits (59), Expect = 5.6
Identities = 20/78 (25%), Positives = 30/78 (38%)
Frame = +3
Query: 96 LVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSD 275
L G ++ TG T + N+ + K P +R +PKN + + GL D
Sbjct: 277 LTGDQPVIIYTGADTEKRQVQNIVLPKNRSDPYLREWTKPKNNPLIEPVGPGLNSNQFRD 336
Query: 276 PMVQCINEESGEHIVAGA 329
P I + I GA
Sbjct: 337 PTTGWIGPDGLWRIAVGA 354
>09_02_0302 -
7086017-7086124,7086125-7086796,7087511-7088070,
7088754-7089131,7089357-7089821,7090022-7090127,
7090219-7090294,7090407-7090648,7090824-7090904,
7091013-7091205,7091336-7091558,7091611-7091646,
7091694-7091790
Length = 1078
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Frame = +3
Query: 150 NAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMV--------QCINEES 305
NA + + +VSP ++ V+P P LV+ L + DP++ + +E
Sbjct: 57 NAMQVDGLLKNVSPTTKIVVKPNEELKSPFLVKRHLFLKRPDPIILDELYSLTTKVTDEE 116
Query: 306 GEHIVAGAGELHLEICLKDLEE 371
V +G L + + L D++E
Sbjct: 117 SRQSVWVSGNLPINLKLVDIQE 138
>06_02_0251 -
13478902-13478952,13478989-13479055,13479168-13479379,
13480144-13481540,13481574-13482432,13482537-13482836
Length = 961
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +3
Query: 228 DLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICL-KDLEEDHACIPIKKSD 404
DLP+ E + + AK+ NEE E I+ +LH E+C KD + H + +
Sbjct: 684 DLPE--ESIHQSAKNSTENTSYNEEPEESIIKRKIKLHQEMCNDKDAQTKHKVEGVSEIG 741
Query: 405 P 407
P
Sbjct: 742 P 742
>06_01_0993 +
7710016-7710977,7711081-7711316,7711422-7711501,
7711977-7712072,7712995-7713892,7713983-7714093,
7714657-7714751
Length = 825
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 319 TMCSPDSSLIHCTMGSDLARRLRPSTSLGRSA 224
+MCS +S HCT D R+RP +L R A
Sbjct: 530 SMCS-ESFSSHCTKSQDSVVRMRPDDTLVRRA 560
>07_01_0212 + 1571631-1572149
Length = 172
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = +2
Query: 101 WSRSVLSQDWYHHHFQECPQHEGD 172
W L DWYHH C G+
Sbjct: 100 WVSPTLDGDWYHHDTNTCTAPAGE 123
>02_04_0640 -
24664841-24664855,24664895-24664978,24665232-24665319,
24665457-24667318
Length = 682
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 484 RLCLLGDFERQSWSDSSATVSRYDTTGSDFLI-GMQAWSSSRS 359
RLC+ D E + D A+ RY+ +G +L+ G+ + S R+
Sbjct: 524 RLCISLDAELKEMQDRMASRQRYEASGRAYLLSGLSSHSWQRA 566
>02_02_0162 +
7315562-7315846,7316432-7316662,7317002-7317144,
7317267-7317381,7317940-7318020
Length = 284
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 69 MCPLVTWCGLVGVDQFLVKTGTITTFKNAHNMK-VMKFSVS 188
+ PL TW + G+ + + + +TT +A K ++ F VS
Sbjct: 82 VAPLSTWADIAGLQELVFRDNKLTTIPDASIFKGLLVFDVS 122
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,444,695
Number of Sequences: 37544
Number of extensions: 354160
Number of successful extensions: 1068
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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