Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0479
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    26   0.71 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   2.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   2.9  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           24   3.8  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    23   5.0  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   8.8  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 26.2 bits (55), Expect = 0.71
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 450 AGPIPQLRSHGTTRQGQTS*LECKHG 373
           AGPIP  + H   +Q Q S L  KHG
Sbjct: 244 AGPIPSQQKHQQHQQQQQSVLLPKHG 269


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -2

Query: 406 GSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLIH 287
           G DFL+ +Q    +   RQ  RW +  P  +    SSLIH
Sbjct: 817 GHDFLLAIQEQCVTVIERQQGRWKALKPFDI--EKSSLIH 854


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -2

Query: 406 GSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLIH 287
           G DFL+ +Q    +   RQ  RW +  P  +    SSLIH
Sbjct: 818 GHDFLLAIQEQCVTVIERQQGRWKALKPFDI--EKSSLIH 855


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -2

Query: 433 ATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSL 293
           + V+    + + +L   Q  SSS S    S  SS + ++  SPDS L
Sbjct: 90  SAVNSSSNSSTGYLHQHQQSSSSSSSSSSSSMSSSSSSSFSSPDSPL 136


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +3

Query: 429 VAEESDQLCLSKSPNKHNRLFMKAQPMP 512
           V    + LC + SPN +    +  QP P
Sbjct: 154 VNSRGNTLCAASSPNAYTNTTIAVQPAP 181


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = +1

Query: 313 TLSLVLENXXXXXXXXXXXXTMLAFQSRSLTLSCRTVRP*LRNRTSSVSQSR 468
           T SLVL +             ++ F++ S  L+ R V+   RNR+   S  R
Sbjct: 180 TPSLVLHDTWEVLDFARSDHQLIRFETNSPALAARRVKLSQRNRSQQRSPRR 231


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,322
Number of Sequences: 2352
Number of extensions: 12534
Number of successful extensions: 75
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)