Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0479
(548 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 279 9e-76
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 279 9e-76
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 129 1e-30
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 129 1e-30
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 65 3e-11
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 61 6e-10
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 61 6e-10
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical p... 31 0.41
U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical pr... 30 0.95
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 30 0.95
Z95310-1|CAB08561.1| 444|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z29094-6|CAD45581.1| 457|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z29094-5|CAA82336.1| 465|Caenorhabditis elegans Hypothetical pr... 29 2.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 2.9
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 28 3.9
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 28 3.9
U53344-5|AAA96226.2| 442|Caenorhabditis elegans More of ms prot... 28 5.1
AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinosit... 28 5.1
AF013489-1|AAC47728.1| 442|Caenorhabditis elegans MOM-1 protein. 28 5.1
AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinosit... 28 5.1
Z69788-7|CAM33502.1| 132|Caenorhabditis elegans Hypothetical pr... 27 6.7
U64836-6|AAG24056.2| 201|Caenorhabditis elegans Hypothetical pr... 27 6.7
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 27 6.7
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 27 6.7
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 27 6.7
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr... 27 8.9
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 279 bits (684), Expect = 9e-76
Identities = 131/152 (86%), Positives = 141/152 (92%)
Frame = +3
Query: 93 GLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKS 272
GLVGVDQ+LVK GTITT+K+AHNM+VMKFSVSPVVRVAVE KNPADLPKLVEGLKRLAKS
Sbjct: 465 GLVGVDQYLVKGGTITTYKDAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKS 524
Query: 273 DPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQL 452
DPMVQCI EESGEHI+AGAGELHLEICLKDLEEDHACIP+KKSDPVVSYRETV ES+Q+
Sbjct: 525 DPMVQCIFEESGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVQSESNQI 584
Query: 453 CLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRV 548
CLSKSPNKHNRL AQPMPDGL +DI+ G V
Sbjct: 585 CLSKSPNKHNRLHCTAQPMPDGLADDIEGGTV 616
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +2
Query: 26 RGILMMGRYVEAIEDVPSGNM 88
R ILMMGR++E IED+PSGN+
Sbjct: 443 RTILMMGRFIEPIEDIPSGNI 463
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 279 bits (684), Expect = 9e-76
Identities = 131/152 (86%), Positives = 141/152 (92%)
Frame = +3
Query: 93 GLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKS 272
GLVGVDQ+LVK GTITT+K+AHNM+VMKFSVSPVVRVAVE KNPADLPKLVEGLKRLAKS
Sbjct: 465 GLVGVDQYLVKGGTITTYKDAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKS 524
Query: 273 DPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEESDQL 452
DPMVQCI EESGEHI+AGAGELHLEICLKDLEEDHACIP+KKSDPVVSYRETV ES+Q+
Sbjct: 525 DPMVQCIFEESGEHIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVQSESNQI 584
Query: 453 CLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRV 548
CLSKSPNKHNRL AQPMPDGL +DI+ G V
Sbjct: 585 CLSKSPNKHNRLHCTAQPMPDGLADDIEGGTV 616
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +2
Query: 26 RGILMMGRYVEAIEDVPSGNM 88
R ILMMGR++E IED+PSGN+
Sbjct: 443 RTILMMGRFIEPIEDIPSGNI 463
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 129 bits (311), Expect = 1e-30
Identities = 61/157 (38%), Positives = 102/157 (64%), Gaps = 3/157 (1%)
Frame = +3
Query: 75 PLVTWCGLVGVDQFLVKTGTITTF---KNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLV 245
P W + G+DQ +VKT TI ++ + + +KF+ V++AVEP NP++LPK++
Sbjct: 549 PAGCWVLIEGIDQPIVKTATIAELGYEEDVYIFRPLKFNTRSCVKLAVEPINPSELPKML 608
Query: 246 EGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRE 425
+GL+++ KS P++ EESGEH++ G GE +++ + D+ + + I IK +DPVV++ E
Sbjct: 609 DGLRKVNKSYPLLTTRVEESGEHVLLGTGEFYMDCVMHDMRKVFSEIDIKVADPVVTFNE 668
Query: 426 TVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDID 536
TV E S C +++PNK N++ M A+P+ L EDI+
Sbjct: 669 TVIETSTLKCFAETPNKKNKITMMAEPLEKQLDEDIE 705
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 129 bits (311), Expect = 1e-30
Identities = 61/157 (38%), Positives = 102/157 (64%), Gaps = 3/157 (1%)
Frame = +3
Query: 75 PLVTWCGLVGVDQFLVKTGTITTF---KNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLV 245
P W + G+DQ +VKT TI ++ + + +KF+ V++AVEP NP++LPK++
Sbjct: 424 PAGCWVLIEGIDQPIVKTATIAELGYEEDVYIFRPLKFNTRSCVKLAVEPINPSELPKML 483
Query: 246 EGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRE 425
+GL+++ KS P++ EESGEH++ G GE +++ + D+ + + I IK +DPVV++ E
Sbjct: 484 DGLRKVNKSYPLLTTRVEESGEHVLLGTGEFYMDCVMHDMRKVFSEIDIKVADPVVTFNE 543
Query: 426 TVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDID 536
TV E S C +++PNK N++ M A+P+ L EDI+
Sbjct: 544 TVIETSTLKCFAETPNKKNKITMMAEPLEKQLDEDIE 580
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 65.3 bits (152), Expect = 3e-11
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = +3
Query: 189 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDL 365
PV+ +A++P N D ++ L R K DP + N+E+ E IV+G GELHLEI + +
Sbjct: 446 PVISMAIKPVNRKDADNFIKALTRFTKEDPTFRREYNQEAKETIVSGMGELHLEIYAQRM 505
Query: 366 EEDHACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPED 530
+ ++ C P++ P V+YRE + K F + + + D LP D
Sbjct: 506 KSEYNC-PVELGKPTVAYRECLGSPYKFHFRHKKQTGGQGQFGEIEGVIDPLPSD 559
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 60.9 bits (141), Expect = 6e-10
Identities = 35/111 (31%), Positives = 62/111 (55%)
Frame = +3
Query: 111 QFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC 290
+ L++ T+ + +K+ + +VRV++ + D+ L E LK LA D ++
Sbjct: 450 EILLQNTTLCEKPDFPCLKIGSQTGEALVRVSISTQQLDDMDDLREKLKLLALLDTSLKV 509
Query: 291 INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEES 443
+ E+GE + AGE+HL+ C+KDL D + + S+P+V + ETV E+S
Sbjct: 510 MELENGELAMVTAGEVHLQKCIKDL-NDLGLVDLDVSEPIVPFMETVIEDS 559
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 60.9 bits (141), Expect = 6e-10
Identities = 35/111 (31%), Positives = 62/111 (55%)
Frame = +3
Query: 111 QFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC 290
+ L++ T+ + +K+ + +VRV++ + D+ L E LK LA D ++
Sbjct: 450 EILLQNTTLCEKPDFPCLKIGSQTGEALVRVSISTQQLDDMDDLREKLKLLALLDTSLKV 509
Query: 291 INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEES 443
+ E+GE + AGE+HL+ C+KDL D + + S+P+V + ETV E+S
Sbjct: 510 MELENGELAMVTAGEVHLQKCIKDL-NDLGLVDLDVSEPIVPFMETVIEDS 559
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +3
Query: 207 VEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDHAC 383
+EP + L + + L+ L + DP ++ + ++G+ IV GELHLE +KD + +
Sbjct: 399 IEPPSNRQLNQFNKALEELTREDPSMKIRFDRDTGQTIVETQGELHLE-AIKDRLKRNYK 457
Query: 384 IPIKKSDPVVSYRETVAEE 440
+ + V+YRE + EE
Sbjct: 458 LDVFIGKLQVAYREMLTEE 476
>Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical
protein M163.11 protein.
Length = 224
Score = 31.5 bits (68), Expect = 0.41
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = -2
Query: 445 SDSSATVSRYDTTGSDFLIGMQAW-SSSRSLRQISRWSSPAPATMCSPDSSLIHCTMGSD 269
SDSS++ S T+ S + SSS S S SS + + + DSS + S
Sbjct: 43 SDSSSSSSTASTSSSSSTAATSSDDSSSSSSSSSSSASSTSSSDTTTADSSSTTSSDSST 102
Query: 268 LARRLRPSTSLGRSAGFLGSTATRTTGDTL-NFITFMLWA 152
+ STS S + ST++ TT + +F T WA
Sbjct: 103 TSSNSSSSTSSSDSTSVVSSTSSSTTTTCVDSFSTCTSWA 142
>U41278-3|AAK31512.1| 453|Caenorhabditis elegans Hypothetical
protein F33G12.4 protein.
Length = 453
Score = 30.3 bits (65), Expect = 0.95
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +3
Query: 153 AHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSD 275
A + F +P V V + NP L +L+E ++++ K +
Sbjct: 71 AQGKTTITFQTTPAVMVCISKANPEALAQLIEAIRKIVKGE 111
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 30.3 bits (65), Expect = 0.95
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3
Query: 378 ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEG 542
AC+PI VS E ++ES+ K +K + +KA + DG+P D D+G
Sbjct: 228 ACLPISVKCDGVSDCENESDESNCNKCQKGAHKCGKNCIKASKVCDGIP-DCDDG 281
>Z95310-1|CAB08561.1| 444|Caenorhabditis elegans Hypothetical
protein H40L08.1 protein.
Length = 444
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -2
Query: 286 CTMGSDLARRLRPSTSLGRS 227
C MGS+ A+RLRP + GRS
Sbjct: 202 CVMGSEDAQRLRPDRAFGRS 221
>Z29094-6|CAD45581.1| 457|Caenorhabditis elegans Hypothetical
protein C07A9.7b protein.
Length = 457
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 44 GRYVEAIEDVPSGNMV 91
GR+VEAIED+P G +V
Sbjct: 29 GRFVEAIEDIPIGTVV 44
>Z29094-5|CAA82336.1| 465|Caenorhabditis elegans Hypothetical
protein C07A9.7a protein.
Length = 465
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +2
Query: 44 GRYVEAIEDVPSGNMV 91
GR+VEAIED+P G +V
Sbjct: 29 GRFVEAIEDIPIGTVV 44
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = -2
Query: 250 PSTSLGRSAGFLGSTATRTTGDTLN 176
PSTS G AGFL STA + G N
Sbjct: 142 PSTSSGLPAGFLNSTANSSVGANNN 166
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical
protein K04G2.8b protein.
Length = 1188
Score = 28.3 bits (60), Expect = 3.9
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = -2
Query: 379 AWSSSRSLRQISRWSSPAPATMCSPDSSLIHCTMGSDLARRLRPSTSLGRSAGFLGSTAT 200
A +SSR+L +S PA TMC+ +L T + + S+G +T T
Sbjct: 638 AANSSRALSPVSYNDIPASPTMCAQVFNLPKSTESEHHQLTSQQQNTTHYSSG-SANTMT 696
Query: 199 RTTGDT---LNFITFMLWAFLKVVMVPVLTKN*STPTR 95
R+ G T ++ I +A L ++V T N + P +
Sbjct: 697 RSDGATTVPMDNIITPTYAILNPILVHEQTPNGTVPRK 734
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical
protein K04G2.8a protein.
Length = 1186
Score = 28.3 bits (60), Expect = 3.9
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = -2
Query: 379 AWSSSRSLRQISRWSSPAPATMCSPDSSLIHCTMGSDLARRLRPSTSLGRSAGFLGSTAT 200
A +SSR+L +S PA TMC+ +L T + + S+G +T T
Sbjct: 636 AANSSRALSPVSYNDIPASPTMCAQVFNLPKSTESEHHQLTSQQQNTTHYSSG-SANTMT 694
Query: 199 RTTGDT---LNFITFMLWAFLKVVMVPVLTKN*STPTR 95
R+ G T ++ I +A L ++V T N + P +
Sbjct: 695 RSDGATTVPMDNIITPTYAILNPILVHEQTPNGTVPRK 732
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 28.3 bits (60), Expect = 3.9
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = -2
Query: 379 AWSSSRSLRQISRWSSPAPATMCSPDSSLIHCTMGSDLARRLRPSTSLGRSAGFLGSTAT 200
A +SSR+L +S PA TMC+ +L T + + S+G +T T
Sbjct: 636 AANSSRALSPVSYNDIPASPTMCAQVFNLPKSTESEHHQLTSQQQNTTHYSSG-SANTMT 694
Query: 199 RTTGDT---LNFITFMLWAFLKVVMVPVLTKN*STPTR 95
R+ G T ++ I +A L ++V T N + P +
Sbjct: 695 RSDGATTVPMDNIITPTYAILNPILVHEQTPNGTVPRK 732
>U53344-5|AAA96226.2| 442|Caenorhabditis elegans More of ms protein
1 protein.
Length = 442
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1
Query: 335 FSSTSDNVFS*FFINTLHHGVRFSQTFKTFY*LGQIS 225
F+ST+ NVF F +++L HG+ F T T LG I+
Sbjct: 303 FNSTACNVFFTFAVSSLLHGLDFQMTI-TLLALGFIA 338
>AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinositide
3-kinase adaptersubunit protein.
Length = 522
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 340 WSSPAPATMCSPDSSLIHCT 281
W SP+P T S DS L+H T
Sbjct: 495 WDSPSPDTPSSSDSRLVHPT 514
>AF013489-1|AAC47728.1| 442|Caenorhabditis elegans MOM-1 protein.
Length = 442
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1
Query: 335 FSSTSDNVFS*FFINTLHHGVRFSQTFKTFY*LGQIS 225
F+ST+ NVF F +++L HG+ F T T LG I+
Sbjct: 303 FNSTACNVFFTFAVSSLLHGLDFQMTI-TLLALGFIA 338
>AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinositide
kinase adaptersubunit protein 1 protein.
Length = 522
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 340 WSSPAPATMCSPDSSLIHCT 281
W SP+P T S DS L+H T
Sbjct: 495 WDSPSPDTPSSSDSRLVHPT 514
>Z69788-7|CAM33502.1| 132|Caenorhabditis elegans Hypothetical
protein F09A5.9 protein.
Length = 132
Score = 27.5 bits (58), Expect = 6.7
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +3
Query: 261 LAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVAEE 440
L SD ++ E GEH GE+ + L+ H C +++D ++ E A+
Sbjct: 52 LFDSDDVLDETTVEYGEHFTLDGGEIEIFSTEPYLQIVHKCFGTERTD-IIDLSEFEADS 110
Query: 441 SDQL 452
+D L
Sbjct: 111 NDIL 114
>U64836-6|AAG24056.2| 201|Caenorhabditis elegans Hypothetical
protein F10G2.1 protein.
Length = 201
Score = 27.5 bits (58), Expect = 6.7
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 453 CLSKSPNKHNRLFMKAQPMPDGLPEDIDE 539
C K NK++ + P PD + E+ DE
Sbjct: 116 CSEKLENKNSTCYQNWDPFPDAIDEETDE 144
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical protein
F21C10.7 protein.
Length = 2541
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +3
Query: 387 PIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPD 515
P S+ V + R+T E+ Q ++K+P+ N ++ P+P+
Sbjct: 1626 PGPTSEHVATIRKTPVRETHQSSITKAPSLENVAKIRQSPVPE 1668
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -2
Query: 442 DSSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLI 290
+ +T + Y+ G+DFL G+Q + +S A A + P+SS +
Sbjct: 379 EKKSTAAEYNPFGADFLSGIQNGKEAPPSASAELLASEAIARLPKPESSSV 429
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -2
Query: 442 DSSATVSRYDTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLI 290
+ +T + Y+ G+DFL G+Q + +S A A + P+SS +
Sbjct: 379 EKKSTAAEYNPFGADFLSGIQNGKEAPPSASAELLASEAIARLPKPESSSV 429
>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical
protein F54B3.1b protein.
Length = 3394
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +3
Query: 96 LVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKS 272
+VG +QF+V T T+ + + V +SP V +A + N + +++ L+ +S
Sbjct: 16 VVGDEQFIVTVRTKCTYISRYYRIVFVLDLSPSVVMADDESNCCLVDRIIPSLRNALRS 74
>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical
protein F54B3.1a protein.
Length = 3396
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +3
Query: 96 LVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKS 272
+VG +QF+V T T+ + + V +SP V +A + N + +++ L+ +S
Sbjct: 16 VVGDEQFIVTVRTKCTYISRYYRIVFVLDLSPSVVMADDESNCCLVDRIIPSLRNALRS 74
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,402,592
Number of Sequences: 27780
Number of extensions: 286039
Number of successful extensions: 912
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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