Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0478
         (506 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    28   0.042
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    24   0.68 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   0.68 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   0.68 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   0.90 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    24   0.90 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   2.7  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   3.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   4.8  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   8.4  

>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 28.3 bits (60), Expect = 0.042
 Identities = 21/67 (31%), Positives = 27/67 (40%)
 Frame = +3

Query: 195 RRGETASEEDPDN*KRARPDTGVSHAG*RKARREGEGSAER*VRSGCPEPTYPTAGGGPR 374
           R G   S E P   +       V   G R+A R G  +  R    GC   +  T  GGPR
Sbjct: 14  RNGGVVSAEHPHQHQHYGAAVQVPQGGRRRAARPGVVTTPR---WGCARASSATTMGGPR 70

Query: 375 EVRGASR 395
             R A++
Sbjct: 71  YGRAAAQ 77


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 24.2 bits (50), Expect = 0.68
 Identities = 20/93 (21%), Positives = 33/93 (35%), Gaps = 2/93 (2%)
 Frame = +1

Query: 22  VDSTYFHLRELKKQNHQNGRAIQKKIQA--MKLEKDNALDRAAMCEQEAKDANLRAEKAE 195
           +D+  F +       H  G    +K+    +K+ K          ++  +      EKA+
Sbjct: 39  IDNGVFEVVATSGDTHLGGEDFDQKVMDYFIKMVKQKHKKDIRADKKALQKLRREVEKAK 98

Query: 196 EEARQLQKKIQTIENELDQTQESLMQVNGKLEE 294
            +   + K   TIEN L     S      K EE
Sbjct: 99  RDLSSVHKTTLTIENLLADYDFSETLTRAKFEE 131


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 0.68
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 220  KIQTIENE-LDQTQESLMQVNGKLEEKEK 303
            K    ENE L + QESL  +N K+E  EK
Sbjct: 1093 KADNKENEQLRKIQESLRDLNRKIESLEK 1121


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 0.68
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +1

Query: 220  KIQTIENE-LDQTQESLMQVNGKLEEKEK 303
            K    ENE L + QESL  +N K+E  EK
Sbjct: 1093 KADNKENEQLRKIQESLRDLNRKIESLEK 1121


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 0.90
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 345 TYPTAGGGPREVRGASR 395
           T+P+ GGGPR   G  R
Sbjct: 64  THPSIGGGPRFSSGVGR 80


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.8 bits (49), Expect = 0.90
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 345 TYPTAGGGPREVRGASR 395
           T+P+ GGGPR   G  R
Sbjct: 64  THPSIGGGPRFSSGVGR 80


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = -2

Query: 403 WRSRDAPRTSRGPPPAVGYVGSGQPLRTQRSAEPSPS 293
           W +   P T   P      + S  P   Q SA+P+PS
Sbjct: 307 WSTVQTPTTVMSPTINCWSLTSSPPPPYQISAQPTPS 343


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -3

Query: 168 VFGLLLTHGSAVERIV 121
           VFG LLT+ S+VE ++
Sbjct: 9   VFGALLTYVSSVEYLI 24


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 348 YPTAGGGPREVRGASRDRHRQAVRGQ 425
           YP  G    E+RG SR ++ + V  Q
Sbjct: 445 YPLIGAMREELRGISRGKNAKDVDWQ 470


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 178 EGWRLWPPA 152
           E  RLWPPA
Sbjct: 337 ESLRLWPPA 345


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.305    0.119    0.294 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,812
Number of Sequences: 336
Number of extensions: 1472
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (20.7 bits)