Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0478
(506 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 44 3e-06
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 34 0.003
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 33 0.006
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 31 0.017
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 29 0.12
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 27 0.48
DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein. 25 1.5
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 25 1.5
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 25 1.5
AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative acetyltr... 25 1.9
AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein ... 23 5.9
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 23 5.9
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 44.0 bits (99), Expect = 3e-06
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 4/145 (2%)
Frame = +1
Query: 43 LRELKKQNHQNGRAIQKKIQAMKLEKDNALDRAA--MCEQEAKDANLRAEKAEEEA--RQ 210
L+E+ ++ HQ + + KK+Q L + L + A + E E ++ LR E +
Sbjct: 739 LQEMTRKLHQRQQHM-KKLQQELLTNEQQLQQLAGVVFEGETEETTLREELEHSRTILAK 797
Query: 211 LQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXXXXXXXXXXX 390
LQK I+ + +LDQ + ++ Q + K+ A+ E+E+A + I
Sbjct: 798 LQKGIEEEQAKLDQVRRTVQQEEQTAQAKKDAMGAVEAEIARIQASIDKEQQARHDLQTN 857
Query: 391 XATATAKLSEASQAADESERARKVL 465
L ++++ +E +R R L
Sbjct: 858 HKVKQQALKRSTESMEERKRTRVAL 882
Score = 28.7 bits (61), Expect = 0.12
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +1
Query: 85 IQKKIQAMKLEKD-NALDRAAMCEQEAKDANLRAEKAEEEAR--QLQKKIQTIENELDQT 255
IQK A ++E+D +R + + E + + EKA+ + R +L I + + E+D
Sbjct: 415 IQK--DARQIEQDLQERNRDGLSQVEQRKQAVETEKAQLKERNDELASMIASAQREVDLM 472
Query: 256 QESLMQVNGKLEEKEKALQNAESEVAALNRRIQ 354
++ V EEK +SE + ++++
Sbjct: 473 YNTMAHVKDAREEKHHERCAKQSETTRIEKQLE 505
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 33.9 bits (74), Expect = 0.003
Identities = 25/107 (23%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Frame = +1
Query: 22 VDSTYFHLRELKKQNHQNGRAIQKKIQAMKLEKDNALDRAAMCEQEAKDANLRAEKAEEE 201
+ T RE + Q + +Q KI K ++ L A E++ K + ++E++ +
Sbjct: 753 LQKTIVEARETQTQCSAKVKDLQAKIADGKGHRERELKSA---EEDLKRSKKKSEESRKN 809
Query: 202 ARQLQKKIQTIENELDQTQESLMQVNG---KLEEKEKALQNAESEVA 333
++ ++ +T++ E+++ Q+ ++ KLEE+ ALQ EV+
Sbjct: 810 WKKHEQDFETLKLEIEELQKGIVTAKEQAVKLEEQIAALQQRLVEVS 856
Score = 27.1 bits (57), Expect = 0.36
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +1
Query: 55 KKQNHQNGRAIQKKIQAMKLEKDNALDRAAMC----EQEAKDANLRAEKAEEEARQLQKK 222
K+ + GR + KK+Q K + +++ AM E+E +R +K E+ + KK
Sbjct: 957 KEDPQEAGRKL-KKLQDSKDKMSRNVNQKAMVLLEREEEQYKEVMRRKKVVEDDK---KK 1012
Query: 223 IQTIENELDQTQESLMQV 276
IQ I +LD+ ++ ++V
Sbjct: 1013 IQAIITDLDEEKKKKLKV 1030
Score = 26.6 bits (56), Expect = 0.48
Identities = 19/109 (17%), Positives = 45/109 (41%), Gaps = 11/109 (10%)
Frame = +1
Query: 58 KQNHQNGRAIQKKIQAMKLEKDNALDRAAMCEQEAKDANLRA-----------EKAEEEA 204
+Q + + KKI+ ++ A + C + KD + + AEE+
Sbjct: 737 QQTKEEIEELNKKIETLQKTIVEARETQTQCSAKVKDLQAKIADGKGHRERELKSAEEDL 796
Query: 205 RQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRI 351
++ +KK + + ++ + ++EE +K + A+ + L +I
Sbjct: 797 KRSKKKSEESRKNWKKHEQDFETLKLEIEELQKGIVTAKEQAVKLEEQI 845
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 33.1 bits (72), Expect = 0.006
Identities = 24/110 (21%), Positives = 51/110 (46%)
Frame = +1
Query: 1 LQEFGTRVDSTYFHLRELKKQNHQNGRAIQKKIQAMKLEKDNALDRAAMCEQEAKDANLR 180
++E R + + +++Q + +Q+ +A+ NA D A Q A+D
Sbjct: 1391 VEESSRRAEEALNLVPNIERQIVNSRDLLQRAEEALYAASRNAED-ARKNAQTAQDKY-- 1447
Query: 181 AEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEV 330
AE+A + A ++K+ +N Q+NG+L + + L+ E+++
Sbjct: 1448 AEEASKLAENIKKRANATKNTARDLHHEADQLNGRLAKTDNRLEEREAQI 1497
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 31.5 bits (68), Expect = 0.017
Identities = 14/71 (19%), Positives = 40/71 (56%)
Frame = +1
Query: 55 KKQNHQNGRAIQKKIQAMKLEKDNALDRAAMCEQEAKDANLRAEKAEEEARQLQKKIQTI 234
+ Q + ++++++ MKL + A + ++ ++E R + + + + ++ +QTI
Sbjct: 958 RTQLEEEANKLREELEEMKLAIEKAHEGSSSIKKEIVALQKREAEGKMKRLEFEQILQTI 1017
Query: 235 ENELDQTQESL 267
E +L +T+++L
Sbjct: 1018 ETKLQETKDTL 1028
Score = 29.9 bits (64), Expect = 0.052
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 199 EARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALN 342
E ++K+Q NE + ++L V GKL+E A+Q+ S+ L+
Sbjct: 542 ELETAKQKLQENANEERELTQTLRAVQGKLQESMAAMQSTRSQGKVLD 589
Score = 27.9 bits (59), Expect = 0.21
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +1
Query: 154 QEAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVA 333
Q++KD + E+E Q I+ +E Q +E ++ +LEE + A++ A +
Sbjct: 931 QKSKD---KINSMEDEVEAAQSAIRKGNDERTQLEEEANKLREELEEMKLAIEKAHEGSS 987
Query: 334 ALNRRI 351
++ + I
Sbjct: 988 SIKKEI 993
Score = 25.4 bits (53), Expect = 1.1
Identities = 29/155 (18%), Positives = 59/155 (38%), Gaps = 11/155 (7%)
Frame = +1
Query: 43 LRELKKQNHQNGRAIQKKIQAMKLEKDNALDRA----AMCEQEAKDANLRAEKAEEEARQ 210
L+++ K+N + + KI+++ +K + A + E K EK + E +
Sbjct: 416 LQDVPKKNKKEIEESEAKIESLTRQKTEVEAKLTANLATLKDETKVLLEEKEKLQTELIE 475
Query: 211 LQKKIQT-------IENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXXXX 369
L++ + E+EL Q + KLE + + E ++ R+Q
Sbjct: 476 LKRAVDESKSALSIAESELKICQHDEVTERRKLESLRYSYEETEKDLEEKRARLQTLEEA 535
Query: 370 XXXXXXXXATATAKLSEASQAADESERARKVLENR 474
TA KL E + E + + ++ +
Sbjct: 536 LPVTRTELETAKQKLQENANEERELTQTLRAVQGK 570
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 28.7 bits (61), Expect = 0.12
Identities = 32/150 (21%), Positives = 58/150 (38%)
Frame = +1
Query: 28 STYFHLRELKKQNHQNGRAIQKKIQAMKLEKDNALDRAAMCEQEAKDANLRAEKAEEEAR 207
ST L K+Q HQ R ++ E D ++ E K+ R + E+ R
Sbjct: 608 STDHALLAQKRQEHQ--RLVR--------ECDKIRNQRGQIENSIKELQERCAELREQKR 657
Query: 208 QLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXXXXXXXXXX 387
LQ+++ ++ QT+ + + K +E L N + E R +
Sbjct: 658 DLQEQL----SKYQQTKMKVKRQEQKCKELTARLVNVDEEKVKFERSCRTIIEQLLDQQR 713
Query: 388 XXATATAKLSEASQAADESERARKVLENRS 477
A + + AS+ D E+ ++ E R+
Sbjct: 714 RKVAALERYAAASREHDLLEQRIRLFEERN 743
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 26.6 bits (56), Expect = 0.48
Identities = 28/85 (32%), Positives = 36/85 (42%)
Frame = +3
Query: 153 AGGQRRQPSC*EGRRRGETASEEDPDN*KRARPDTGVSHAG*RKARREGEGSAER*VRSG 332
+GG+ P+ R+R + EED D +R S +G R R G GS R+G
Sbjct: 1036 SGGESGAPAT--KRKRRIASDEEDSDGSQRRSRSRSRSGSGSRSRSRSGSGS-----RAG 1088
Query: 333 CPEPTYPTAGGGPREVRGASRDRHR 407
AG G R R SR R R
Sbjct: 1089 ------SRAGSGSRS-RSRSRSRSR 1106
Score = 23.8 bits (49), Expect = 3.4
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = +3
Query: 132 RPRCHV*AGGQRRQPSC*EGRRRGETASEEDPDN*KRARPDTGVSHAG*RKARREGEGSA 311
+PR GG R++ G++ SEE+ R R G S ++ + EG +
Sbjct: 944 KPRKSQGGGGSRKRKEKARRGSGGDSDSEEEEGEGSRKRKKKGASGGQKKRQKAMDEGLS 1003
Query: 312 ER 317
++
Sbjct: 1004 QK 1005
Score = 23.8 bits (49), Expect = 3.4
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +3
Query: 48 GAEKTKPPKWEGDP-EEDTGDEAGEGQCARPRCHV*AGGQRRQPSC*EG 191
G+ K K G + D+ +E GEG R + G ++RQ + EG
Sbjct: 953 GSRKRKEKARRGSGGDSDSEEEEGEGSRKRKKKGASGGQKKRQKAMDEG 1001
Score = 22.6 bits (46), Expect = 7.9
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +3
Query: 294 EGEGSAER*VRSGCPEPTYPTAGGGPREVRGASR 395
EG G+ + R G +P GGG R+ + +R
Sbjct: 929 EGSGAPKERKRKGEKKPRKSQGGGGSRKRKEKAR 962
>DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein.
Length = 847
Score = 25.0 bits (52), Expect = 1.5
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 63 KPPKWEGDPEEDTGDEAGEGQCARPR 140
KP K +ED DE E ARPR
Sbjct: 85 KPEKDRKPSDEDDDDEGDEANDARPR 110
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 25.0 bits (52), Expect = 1.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 31 TYFHLRELKKQNHQNGRAIQKKIQAMKLE 117
+YF LRELK+ R +Q ++ A + E
Sbjct: 1267 SYFELRELKRAEKTIIRLVQNEVYATEYE 1295
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 25.0 bits (52), Expect = 1.5
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +1
Query: 151 EQEAKDANLRAEKAEEEARQL----QKKIQTIENELDQTQESLMQVNGKLEEKEKALQNA 318
E+E + A LR E+ EAR+ +K+ + E + +E + + E++E+ Q
Sbjct: 444 EEEHRAARLREEERAREAREAAIEREKERELREQREREQREKEQREKEQREKEERERQQR 503
Query: 319 ESE 327
E E
Sbjct: 504 EKE 506
>AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative
acetyltransferase protein.
Length = 471
Score = 24.6 bits (51), Expect = 1.9
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -2
Query: 484 PPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPRT 377
PP S PY+ IHR P R + + PR+
Sbjct: 230 PPPPTSNEPYLVVPIHRHPELKEQCVRLINTEWPRS 265
>AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein
protein.
Length = 705
Score = 23.0 bits (47), Expect = 5.9
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -3
Query: 174 VGVFGLLLTHGSAVERI 124
V +FG+LLTHG + ++
Sbjct: 527 VSLFGVLLTHGYLIMQV 543
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 23.0 bits (47), Expect = 5.9
Identities = 22/102 (21%), Positives = 40/102 (39%)
Frame = +1
Query: 49 ELKKQNHQNGRAIQKKIQAMKLEKDNALDRAAMCEQEAKDANLRAEKAEEEARQLQKKIQ 228
E+K+QN + I + Q ++ EK+ A R E++ K + A + R L +
Sbjct: 109 EMKEQNFRLAEQITRMCQLLQEEKEEAKRR----EEKLKAQMEKLAAAHQRDRNLLNSLL 164
Query: 229 TIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQ 354
+ Q S Q L + A + + N++ Q
Sbjct: 165 AAKVAGGQPSASSRQPPTPLPRRSSAQPQQQQQQQQRNQQEQ 206
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.305 0.119 0.294
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 405,776
Number of Sequences: 2352
Number of extensions: 7856
Number of successful extensions: 29
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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