BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0475
(441 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U89800-1|AAD03793.1| 260|Anopheles gambiae Tc1-like transposase... 24 2.1
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 23 6.4
U89799-1|AAD03792.1| 332|Anopheles gambiae Tc1-like transposase... 22 8.4
AY324315-1|AAQ89700.1| 153|Anopheles gambiae insulin-like pepti... 22 8.4
AY324314-1|AAQ89699.1| 153|Anopheles gambiae insulin-like pepti... 22 8.4
AY324307-1|AAQ89692.1| 154|Anopheles gambiae insulin-like pepti... 22 8.4
>U89800-1|AAD03793.1| 260|Anopheles gambiae Tc1-like transposase
protein.
Length = 260
Score = 24.2 bits (50), Expect = 2.1
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 145 QSILEEKLYPQSLNLNEIQKFA-EEHYILGKDND 243
+ IL K+ P + QKF EEHYI DND
Sbjct: 138 RKILRRKMLPYAR-----QKFGDEEHYIFQHDND 166
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 22.6 bits (46), Expect = 6.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 148 SILEEKLYPQSLNLNEIQKFAEE 216
SILEEKL NL+ I +F ++
Sbjct: 1073 SILEEKLNANKPNLSVIDEFLKK 1095
>U89799-1|AAD03792.1| 332|Anopheles gambiae Tc1-like transposase
protein.
Length = 332
Score = 22.2 bits (45), Expect = 8.4
Identities = 10/16 (62%), Positives = 11/16 (68%), Gaps = 1/16 (6%)
Frame = +1
Query: 199 QKFA-EEHYILGKDND 243
Q+F EEHYI DND
Sbjct: 223 QQFGDEEHYIFQHDND 238
>AY324315-1|AAQ89700.1| 153|Anopheles gambiae insulin-like peptide
7 precursor protein.
Length = 153
Score = 22.2 bits (45), Expect = 8.4
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -1
Query: 441 SKCCHSSCTTPTI 403
++CC+ SCT T+
Sbjct: 135 AECCYQSCTLDTL 147
>AY324314-1|AAQ89699.1| 153|Anopheles gambiae insulin-like peptide
7 precursor protein.
Length = 153
Score = 22.2 bits (45), Expect = 8.4
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -1
Query: 441 SKCCHSSCTTPTI 403
++CC+ SCT T+
Sbjct: 135 AECCYQSCTLDTL 147
>AY324307-1|AAQ89692.1| 154|Anopheles gambiae insulin-like peptide
1 precursor protein.
Length = 154
Score = 22.2 bits (45), Expect = 8.4
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -1
Query: 441 SKCCHSSCTTPTI 403
++CC+ SCT T+
Sbjct: 136 AECCYQSCTLDTL 148
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 446,107
Number of Sequences: 2352
Number of extensions: 8715
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36993357
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -