Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0475
         (441 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g16980.1 68414.m02062 alpha, alpha-trehalose-phosphate syntha...    30   0.80 
At3g44550.1 68416.m04788 acyl CoA reductase, putative similar to...    29   1.8  
At1g49860.1 68414.m05590 glutathione S-transferase, putative sim...    27   7.4  
At4g33790.1 68417.m04796 acyl CoA reductase, putative similar to...    26   9.8  
At4g16563.1 68417.m02506 aspartyl protease family protein contai...    26   9.8  
At2g25680.1 68415.m03078 expressed protein ; expression supporte...    26   9.8  

>At1g16980.1 68414.m02062 alpha, alpha-trehalose-phosphate synthase,
           UDP-forming, putative / trehalose-6-phosphate synthase,
           putative / UDP-glucose-glucosephosphate
           glucosyltransferase, putative similar to
           trehalose-6-phosphate synthase SL-TPS/P [Selaginella
           lepidophylla] GI:4100325; contains Pfam profiles
           PF00982: Glycosyltransferase family 20, PF02358:
           Trehalose-phosphatase
          Length = 821

 Score = 29.9 bits (64), Expect = 0.80
 Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = +1

Query: 163 KLYPQSLNLNEIQ-KFAEEHYILGKDNDEMIKFIGNHPNTY-AYTKALAEN 309
           KL   +  +NE+Q KFA +  ILG D  +MIK I   P  Y A+ K L EN
Sbjct: 262 KLPEVTQQMNELQEKFAGKKVILGVDRLDMIKGI---PQKYLAFEKFLEEN 309


>At3g44550.1 68416.m04788 acyl CoA reductase, putative similar to
           acyl CoA reductase [Simmondsia chinensis] GI:5020215;
           contains Pfam profile PF03015: Male sterility protein
          Length = 402

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
 Frame = +1

Query: 154 LEEKLYPQSLN-LNEIQKFAEEHYILGKDNDEMIKF-IGNHPNTYAYTKALAENLVAEEH 327
           LE +L  Q L  LNE Q  +EE   L      M +  +   PNTY +TK++ E L+ +  
Sbjct: 195 LERELMKQRLKELNE-QDCSEEDITLSMKELGMERAKLHGWPNTYVFTKSMGEMLLGKHK 253

Query: 328 GEXXXXXXXXXXXXXXXEEPVRGFVD 405
                             EP  G+++
Sbjct: 254 ENLPLVIIRPTMITSTLSEPFPGWIE 279


>At1g49860.1 68414.m05590 glutathione S-transferase, putative
           similar to GI:860955 from [Hyoscyamus muticus] (Plant
           Physiol. 109 (1), 253-260 (1995))
          Length = 254

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = +1

Query: 175 QSLNLNEIQKFAEEHYILGKDNDEMIKFIGNHPNTYAYTKAL 300
           +S +L ++   A   Y+L  D +E+   I + PN  A+ + +
Sbjct: 163 ESFSLADLHHLAPIDYLLNTDEEELKNLIYSRPNVAAWVEKM 204


>At4g33790.1 68417.m04796 acyl CoA reductase, putative similar to
           acyl CoA reductase [Simmondsia chinensis] GI:5020215;
           contains Pfam profile PF03015: Male sterility protein;
           No start codon identified, may contain anomalous
           splicing at 5' end.
          Length = 380

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 12/45 (26%), Positives = 19/45 (42%)
 Frame = +1

Query: 271 PNTYAYTKALAENLVAEEHGEXXXXXXXXXXXXXXXEEPVRGFVD 405
           PNTY +TKA+ E +V  +                  +EP  G+ +
Sbjct: 125 PNTYVFTKAMGEMMVGTKRENLSLVLLRPSIITSTFKEPFPGWTE 169


>At4g16563.1 68417.m02506 aspartyl protease family protein contains
           Pfam profile: PF00026 eukaryotic aspartyl protease
          Length = 499

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = -2

Query: 383 SSALAVIIEGLMIIVGISPCSSATKFSASAFVYAYVFGWLPINFIISSLSLPNI*CSSAN 204
           SS L  I    +  +    C++++ +    F YAY  G L       SLSLP++  S+  
Sbjct: 155 SSDLCAISNCPLDFIETGDCNTSS-YPCPPFYYAYGDGSLVAKLYSDSLSLPSVSVSNFT 213

Query: 203 F 201
           F
Sbjct: 214 F 214


>At2g25680.1 68415.m03078 expressed protein ; expression supported
           by MPSS
          Length = 456

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = -3

Query: 304 LPALLCMHMCLGGYL*ILSFHRCLYLIYNVLQRTSVFRLDL 182
           +P ++   +C GG L +L     + L++N++  + V  + L
Sbjct: 107 IPEIMAAGICTGGILFVLGISGLMQLVFNIIPLSVVRGIQL 147


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,017,184
Number of Sequences: 28952
Number of extensions: 166723
Number of successful extensions: 374
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 374
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 702840360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)