Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0474
         (569 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    27   0.11 
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   4.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   9.8  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   9.8  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = -3

Query: 288 LFSLLAFTETAAVCGLFRSHDANLSLWPDLEMLNTILARCMIVVCCDPLVCQTFDTV 118
           L +L  FT T  +  L+  H   +S    ++   T++A C +V+ CD    ++  TV
Sbjct: 252 LVALNFFTSTLEIDNLYLKHKLEISSL--VQTAITLVAMCGLVLICDSAKSESQQTV 306


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +2

Query: 203 SGQSERFASWLLNKPQTAAVSVNANRLKSST 295
           S Q   F S +LN      +++N N + SS+
Sbjct: 43  SPQGASFGSSMLNSGMPGGMAMNGNGMTSSS 73


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +2

Query: 395 AFFRNATNGAQPGAAYTPPPNLAPYN 472
           A   N   G +PGAAY    N+   N
Sbjct: 403 AHLPNTHMGHEPGAAYYQNENMLQKN 428


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +2

Query: 395 AFFRNATNGAQPGAAYTPPPNLAPYN 472
           A   N   G +PGAAY    N+   N
Sbjct: 351 AHLPNTHMGHEPGAAYYQNENMLQKN 376


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,397
Number of Sequences: 336
Number of extensions: 3077
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)