Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0474
         (569 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical ...    93   1e-19
Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical pr...    31   0.77 
Z81017-3|CAB54257.1|  629|Caenorhabditis elegans Hypothetical pr...    29   1.8  
Z81017-2|CAB02672.1|  578|Caenorhabditis elegans Hypothetical pr...    29   1.8  
Z81017-1|CAB02669.1|  592|Caenorhabditis elegans Hypothetical pr...    29   1.8  
U80221-1|AAB38367.1|  579|Caenorhabditis elegans F58A3.1b protein.     29   1.8  
U80220-1|AAB38366.1|  592|Caenorhabditis elegans F58A3.1a protein.     29   1.8  
Z81028-3|CAB02691.1|  545|Caenorhabditis elegans Hypothetical pr...    29   2.4  
L16685-3|AAA28169.3|  321|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z73910-4|CAA98136.1|  662|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AF106583-1|AAM15569.1|  183|Caenorhabditis elegans Hypothetical ...    28   5.4  
AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily a...    28   5.4  
AY349014-1|AAQ55494.1|  583|Caenorhabditis elegans NHR-41A protein.    27   7.2  
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr...    27   9.5  
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr...    27   9.5  
U64851-1|AAC47990.2|  186|Caenorhabditis elegans Ground-like (gr...    27   9.5  

>AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical
           protein T22B11.5 protein.
          Length = 1029

 Score = 93.1 bits (221), Expect = 1e-19
 Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
 Frame = +2

Query: 167 MHRARIVFNISKSGQSERFASWLLNKPQTAAVSVNANRLKSSTAA---EPFLNGSSSAYV 337
           MHRA ++  ++   +     +    K   +A ++  +R +S  AA   EPFLNGSSS Y+
Sbjct: 1   MHRASLICRLASPSRINAIRNASSGKSHISASTLVQHRNQSVAAAVKHEPFLNGSSSIYI 60

Query: 338 ETMYNAWLADPNSVHASWDAFFRNATNGAQPGAAYTPPPNLA 463
           E MY AWL DP+SVH SWDA+FRN   GA PG A+  PP  A
Sbjct: 61  EQMYEAWLQDPSSVHTSWDAYFRNVEAGAGPGQAFQAPPATA 102


>Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical
           protein D2085.1 protein.
          Length = 2198

 Score = 30.7 bits (66), Expect = 0.77
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +2

Query: 332 YVETMYNAWLADPNSVHASWDAFFRNATNGAQPGAAYTPPP 454
           Y+ +  + +  DP+S+ A W A F N  +    G  ++  P
Sbjct: 292 YITSQNHGYAVDPDSLPADWKALFTNENDKTNEGIVHSSKP 332


>Z81017-3|CAB54257.1|  629|Caenorhabditis elegans Hypothetical
           protein F58A3.1c protein.
          Length = 629

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 446 PPPNLAPYN-KNEVPLTSLVPSSGGMP 523
           PPPNL P+   N++P + + P  G MP
Sbjct: 529 PPPNLPPHTMSNQMPNSRMPPMQGQMP 555


>Z81017-2|CAB02672.1|  578|Caenorhabditis elegans Hypothetical
           protein F58A3.1b protein.
          Length = 578

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 446 PPPNLAPYN-KNEVPLTSLVPSSGGMP 523
           PPPNL P+   N++P + + P  G MP
Sbjct: 478 PPPNLPPHTMSNQMPNSRMPPMQGQMP 504


>Z81017-1|CAB02669.1|  592|Caenorhabditis elegans Hypothetical
           protein F58A3.1a protein.
          Length = 592

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 446 PPPNLAPYN-KNEVPLTSLVPSSGGMP 523
           PPPNL P+   N++P + + P  G MP
Sbjct: 492 PPPNLPPHTMSNQMPNSRMPPMQGQMP 518


>U80221-1|AAB38367.1|  579|Caenorhabditis elegans F58A3.1b protein.
          Length = 579

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 446 PPPNLAPYN-KNEVPLTSLVPSSGGMP 523
           PPPNL P+   N++P + + P  G MP
Sbjct: 479 PPPNLPPHTMSNQMPNSRMPPMQGQMP 505


>U80220-1|AAB38366.1|  592|Caenorhabditis elegans F58A3.1a protein.
          Length = 592

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 446 PPPNLAPYN-KNEVPLTSLVPSSGGMP 523
           PPPNL P+   N++P + + P  G MP
Sbjct: 492 PPPNLPPHTMSNQMPNSRMPPMQGQMP 518


>Z81028-3|CAB02691.1|  545|Caenorhabditis elegans Hypothetical
           protein B0365.6 protein.
          Length = 545

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
 Frame = +2

Query: 281 LKSSTAAEPFLNGSSSAYVETMYNAWLAD-PNS-VHASWDAFFRNATNGAQPGAAYTPPP 454
           L+ ++A+  +   +++  ++ ++   +A+ PN  V+  W+A F+ +T+  QP    TP P
Sbjct: 371 LQGNSASNQWYTSTTNT-MKVVFRPCIANCPNDGVNYRWEADFKPSTDVTQPPVTVTPNP 429

Query: 455 N 457
           N
Sbjct: 430 N 430


>L16685-3|AAA28169.3|  321|Caenorhabditis elegans Hypothetical
           protein ZC21.3 protein.
          Length = 321

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 26/118 (22%), Positives = 47/118 (39%)
 Frame = +2

Query: 191 NISKSGQSERFASWLLNKPQTAAVSVNANRLKSSTAAEPFLNGSSSAYVETMYNAWLADP 370
           + S +GQ+  + +   N P     S ++ +  +   +  +   S+  Y    YN   A  
Sbjct: 51  SFSSNGQA-MYQTGTTNYPTLYQPSSSSPQYSNGAPSTTYSPTSTYGYSSQNYNPSSASS 109

Query: 371 NSVHASWDAFFRNATNGAQPGAAYTPPPNLAPYNKNEVPLTSLVPSSGGMPSISAGSP 544
           ++V+ +    + N     Q   AY      +PY    VP T+   S  G   ++AG P
Sbjct: 110 SNVYRNPSTSYGNTQQSNQNYVAYDTTNQNSPYYYQRVPSTAQYNSVLG---VNAGFP 164


>Z73910-4|CAA98136.1|  662|Caenorhabditis elegans Hypothetical
           protein M117.4 protein.
          Length = 662

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = +2

Query: 425 QPGAAYTPPPNLAPYNKNEVPLTSLVPSSGGMPSISAGSPINEKI 559
           +P A   PPP+ AP      PL++ VPS+G  P  SA  P ++K+
Sbjct: 161 KPLAKPLPPPSAAP--PPVAPLSAPVPSTGAPP--SAVPPADKKM 201


>AF106583-1|AAM15569.1|  183|Caenorhabditis elegans Hypothetical
           protein F23C8.13 protein.
          Length = 183

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = -1

Query: 458 DWAAACMRRLAELRLSHCGKMHPKTRVRSLGRRAMHCTWSR 336
           D  +  MRR  + RLS C +   +TR    GR  +  T SR
Sbjct: 73  DGESVMMRRRRQARLSMCNEQREQTRHVVSGRATLRMTSSR 113


>AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 168 protein.
          Length = 1347

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +2

Query: 326 SAYVETMYNAWLAD-PNSVHASWDAFFRNATNGAQPGA 436
           ++Y   + N+     PNS H+ +  F R+A+ GAQP A
Sbjct: 635 TSYAANLQNSMQQSAPNSGHSGYATFDRSASLGAQPQA 672


>AY349014-1|AAQ55494.1|  583|Caenorhabditis elegans NHR-41A protein.
          Length = 583

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +3

Query: 303 NPSLMAPVQLTSRPCTMHGSPTQTP-YTRLGMHFSAMRQTELSQA 434
           NP LMA +Q T  P   H S    P    +    +A+R  +LS A
Sbjct: 78  NPQLMAMMQATRNPLLGHPSVVGPPMMPNIIQQLNALRNVQLSNA 122


>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
           protein W01F3.3 protein.
          Length = 2175

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 1/104 (0%)
 Frame = +2

Query: 251 TAAVSVNANRLKSSTAAEPFLNGSSSAYVETMYNAWLADPNSVHASWDAFFRNATNGAQP 430
           T  + V  +R +  T  + + +  SS  V T     ++ P   H S+  +F N  +    
Sbjct: 391 TQGIEVPNSRTRDGTRPDCY-SIQSSRTVNTKECVGVSLPGPCHGSFQRYFYNEDSQKCE 449

Query: 431 GAAYTP-PPNLAPYNKNEVPLTSLVPSSGGMPSISAGSPINEKI 559
              Y+    N   Y   E       P   G+P    G P+  KI
Sbjct: 450 QFTYSGCGGNGNNYESREACEDRCAPPPVGLPKCEIGEPLKTKI 493


>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
           protein F36F2.3a protein.
          Length = 1128

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 446 PPPNLAPYNKNEVPLTSLVPSSGGMPSISAGSP 544
           PPP +   +   +P    +P + GMP  SAG P
Sbjct: 422 PPPGVPGLSATVLPQHQSMPLNYGMPLFSAGFP 454


>U64851-1|AAC47990.2|  186|Caenorhabditis elegans Ground-like (grd
           related) protein12 protein.
          Length = 186

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 395 AFFRNATNGAQPGAAYTPPPNLAPYNKNEVPLTSLVPSS 511
           AFF +   G+  G + TPPP+  P     +P+ +  P S
Sbjct: 18  AFFNSLFGGSNCGCSCTPPPSTCP--TTCLPIMTCTPPS 54


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,431,920
Number of Sequences: 27780
Number of extensions: 289325
Number of successful extensions: 914
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)