Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0474
(569 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g65750.1 68418.m08274 2-oxoglutarate dehydrogenase E1 compone... 56 2e-08
At3g55410.1 68416.m06154 2-oxoglutarate dehydrogenase E1 compone... 54 5e-08
At2g31400.1 68415.m03837 pentatricopeptide (PPR) repeat-containi... 36 0.025
At2g15530.2 68415.m01778 zinc finger (C3HC4-type RING finger) fa... 33 0.13
At2g15530.1 68415.m01777 zinc finger (C3HC4-type RING finger) fa... 33 0.13
At1g29720.1 68414.m03633 protein kinase family protein contains ... 31 0.54
At5g20230.1 68418.m02408 plastocyanin-like domain-containing pro... 30 0.95
At2g43410.1 68415.m05395 RNA recognition motif (RRM)-containing ... 30 1.2
At1g64450.1 68414.m07306 proline-rich family protein contains pr... 30 1.2
At3g24550.1 68416.m03083 protein kinase family protein contains ... 29 2.2
At5g49760.1 68418.m06163 leucine-rich repeat family protein / pr... 29 2.9
At3g01180.1 68416.m00023 glycogen synthase, putative similar to ... 29 2.9
At1g20110.1 68414.m02516 zinc finger (FYVE type) family protein ... 29 2.9
At2g27630.1 68415.m03350 ubiquitin carboxyl-terminal hydrolase-r... 28 3.8
At1g11820.1 68414.m01358 glycosyl hydrolase family 17 protein si... 28 3.8
At4g08390.2 68417.m01386 L-ascorbate peroxidase, stromal (sAPX) ... 28 5.0
At4g08390.1 68417.m01385 L-ascorbate peroxidase, stromal (sAPX) ... 28 5.0
At5g49770.1 68418.m06164 leucine-rich repeat transmembrane prote... 27 6.7
At5g41680.2 68418.m05065 protein kinase family protein contains ... 27 6.7
At5g41680.1 68418.m05064 protein kinase family protein contains ... 27 6.7
At5g49780.1 68418.m06165 leucine-rich repeat transmembrane prote... 27 8.8
At1g61850.1 68414.m06979 patatin family protein similar to membr... 27 8.8
At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-relate... 27 8.8
>At5g65750.1 68418.m08274 2-oxoglutarate dehydrogenase E1 component,
putative / oxoglutarate decarboxylase, putative /
alpha-ketoglutaric dehydrogenase, putative similar to
SP|P20967 2-oxoglutarate dehydrogenase E1 component,
mitochondrial precursor (EC 1.2.4.2)
(Alpha-ketoglutarate dehydrogenase) {Saccharomyces
cerevisiae}; contains Pfam profiles PF02779:
Transketolase, pyridine binding domain, PF00676:
Dehydrogenase E1 component
Length = 1025
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/67 (43%), Positives = 38/67 (56%)
Frame = +2
Query: 209 QSERFASWLLNKPQTAAVSVNANRLKSSTAAEPFLNGSSSAYVETMYNAWLADPNSVHAS 388
Q+ F S +L +A V + S + FL+G+SS Y+E + AW ADPNSV S
Sbjct: 37 QTRCFHSTILKSKAESAAPV-PRPVPLSKLTDSFLDGTSSVYLEELQRAWEADPNSVDES 95
Query: 389 WDAFFRN 409
WD FFRN
Sbjct: 96 WDNFFRN 102
>At3g55410.1 68416.m06154 2-oxoglutarate dehydrogenase E1 component,
putative / oxoglutarate decarboxylase, putative /
alpha-ketoglutaric dehydrogenase, putative similar to
SP|P20967 2-oxoglutarate dehydrogenase E1 component,
mitochondrial precursor (EC 1.2.4.2)
(Alpha-ketoglutarate dehydrogenase) {Saccharomyces
cerevisiae}; contains Pfam profiles PF02779:
Transketolase, pyridine binding domain, PF00676:
Dehydrogenase E1 component
Length = 1017
Score = 54.4 bits (125), Expect = 5e-08
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = +2
Query: 290 STAAEPFLNGSSSAYVETMYNAWLADPNSVHASWDAFFRN 409
S + FL+G+SS Y+E + AW ADPNSV SWD FFRN
Sbjct: 60 SKLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRN 99
>At2g31400.1 68415.m03837 pentatricopeptide (PPR) repeat-containing
protein low similarity to fertility restorer [Petunia x
hybrida] GI:22128587, post-transcriptional control of
chloroplast gene expression CRP1 [Zea mays] GI:3289002;
contains Pfam profile PF01535: PPR repeat
Length = 918
Score = 35.5 bits (78), Expect = 0.025
Identities = 25/70 (35%), Positives = 32/70 (45%)
Frame = +3
Query: 243 NHRLPRFQ*MPTG*RAPPRRNPSLMAPVQLTSRPCTMHGSPTQTPYTRLGMHFSAMRQTE 422
NHR P G APP + + +AP QL+ P + SP QTP + L FS R T
Sbjct: 88 NHRPYGASSSPRG-SAPPPSSVATVAPAQLSQPP---NFSPLQTPKSDLSSDFSGRRSTR 143
Query: 423 LSQAPHTRRR 452
H R+
Sbjct: 144 FVSKMHFGRQ 153
>At2g15530.2 68415.m01778 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 704
Score = 33.1 bits (72), Expect = 0.13
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 15/149 (10%)
Frame = +2
Query: 146 GSQQTTIMHRARIVFNISKSGQSERFASWLLNKPQTAAVSVNANRL------KSSTAAEP 307
G QT I+H + NI + F+S N + + + A RL S +P
Sbjct: 351 GENQTNIVHLPALTRNIHQYAWDASFSSRASNP---SGIGMPAERLGPQWETPRSNQEQP 407
Query: 308 FLNGSSSAYVETMYNAWLADPNSVHASWDAFF------RNATNGAQPGAAYTPPPNLAPY 469
L ++ + +++ W S +S D+ F +A + QP + PP N P+
Sbjct: 408 -LFAPATDMRQPVHDLWNFARGSPGSSVDSLFVPRAGPSSAIHTPQPNPTWIPPQNAPPH 466
Query: 470 N---KNEVPLTSLVPSSGGMPSISAGSPI 547
N +E+ SL PS PS S G P+
Sbjct: 467 NPSRTSELSPWSLFPSIES-PSASHGGPL 494
>At2g15530.1 68415.m01777 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 704
Score = 33.1 bits (72), Expect = 0.13
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 15/149 (10%)
Frame = +2
Query: 146 GSQQTTIMHRARIVFNISKSGQSERFASWLLNKPQTAAVSVNANRL------KSSTAAEP 307
G QT I+H + NI + F+S N + + + A RL S +P
Sbjct: 351 GENQTNIVHLPALTRNIHQYAWDASFSSRASNP---SGIGMPAERLGPQWETPRSNQEQP 407
Query: 308 FLNGSSSAYVETMYNAWLADPNSVHASWDAFF------RNATNGAQPGAAYTPPPNLAPY 469
L ++ + +++ W S +S D+ F +A + QP + PP N P+
Sbjct: 408 -LFAPATDMRQPVHDLWNFARGSPGSSVDSLFVPRAGPSSAIHTPQPNPTWIPPQNAPPH 466
Query: 470 N---KNEVPLTSLVPSSGGMPSISAGSPI 547
N +E+ SL PS PS S G P+
Sbjct: 467 NPSRTSELSPWSLFPSIES-PSASHGGPL 494
>At1g29720.1 68414.m03633 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 300
Score = 31.1 bits (67), Expect = 0.54
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +1
Query: 49 LKISIKGEN*LNLDWTARPSFCSNSVKGL--THQGVTTNNNHASSK 180
L +++ G+N L LDW AR C +GL H G H K
Sbjct: 35 LALALFGQNSLKLDWAARQKICVGIARGLEFLHDGSAMRMVHRDIK 80
>At5g20230.1 68418.m02408 plastocyanin-like domain-containing
protein
Length = 196
Score = 30.3 bits (65), Expect = 0.95
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +2
Query: 410 ATNGAQPGAAYTPPPNLAPYNKNEVPLTSLVPSSGG--MPSISAGS 541
AT GA PGA TP P P P P++GG PS S+G+
Sbjct: 128 ATGGATPGAGATPAPGSTPSTGGTTP-----PTAGGTTTPSGSSGT 168
>At2g43410.1 68415.m05395 RNA recognition motif (RRM)-containing
protein contains InterPro entry IPR000504: RNA-binding
region RNP-1 (RNA recognition motif) (RRM)
Length = 1056
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +2
Query: 338 ETMYNAWLADPNSVHASWDAFFRNATNGAQPGAAYTPPPNLAPYNKNEVPLTS 496
E AW P +VH + + F+ N P PPP+ P N TS
Sbjct: 841 EAPSQAWKRGPQTVHDASNQSFQQYGNQYTPAGQLPPPPSRYPPASNNPNYTS 893
>At1g64450.1 68414.m07306 proline-rich family protein contains
proline rich extensins, INTERPRO:IPR0002965
Length = 342
Score = 29.9 bits (64), Expect = 1.2
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Frame = +2
Query: 242 KPQTAAVSVNANRLKSSTAAEPFLNGSSSAYVETMYNAWLADPN-SVHASWDAFFRNATN 418
KP+ +SVNA +L S + N S S YV + +PN +V + +D+ + +
Sbjct: 42 KPKDPKISVNAVQLPSFAVSNNTANFSFSQYVA------VRNPNRAVFSHYDSSIQLLYS 95
Query: 419 GAQPGAAYTPPPNLAPYNKNEVPLTSLVPSSG-GMPSISAGSPINEKIIDD 568
G Q G + P + + T V S PS SA S ++ +I D
Sbjct: 96 GNQVGFMFIPAGKIDSGRIQYMAATFTVHSFPISPPSSSAISTVSAAVIPD 146
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 29.1 bits (62), Expect = 2.2
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +2
Query: 407 NATNGAQPGAAYTPPPNLAPYNKNEVP---LTSLVPSSGGMPSISAGSP 544
N+T P AA +PPP P + P TS PSS PS+ SP
Sbjct: 21 NSTTTTPPPAASSPPPTTTPSSPPPSPSTNSTSPPPSSPLPPSLPPPSP 69
>At5g49760.1 68418.m06163 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 953
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 49 LKISIKGEN*LNLDWTARPSFCSNSVKGLTH 141
LK S+ G++ + LDWT R S KGL +
Sbjct: 712 LKDSLSGKSGIRLDWTRRLKIALGSGKGLAY 742
>At3g01180.1 68416.m00023 glycogen synthase, putative similar to
glycogen synthase Q43847 from [Solanum tuberosum]
Length = 792
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 291 PPRRNPSLMAPVQLTSRPCTMHGSPTQTPYTRLGMHFSAMRQTELSQAPHT 443
PP + S+M + TS P T G P++ +R G +S + L++AP T
Sbjct: 215 PPYKPSSVMTSPEKTSDPVTSPGKPSK---SRAGAFWSDPLPSYLTKAPQT 262
>At1g20110.1 68414.m02516 zinc finger (FYVE type) family protein
contains Pfam profile: PF01363 FYVE zinc finger
Length = 601
Score = 28.7 bits (61), Expect = 2.9
Identities = 29/102 (28%), Positives = 40/102 (39%), Gaps = 7/102 (6%)
Frame = +2
Query: 245 PQTAAVSVNANRLKSSTAAEP---FLNGSSSAYVETMYNAWLADPNSVHASWDAFFRNAT 415
P A S+N N + P S+Y A P S H + + ++ T
Sbjct: 96 PSPPATSLNPNSYSTFNQPPPPPTIHPQPLSSYGSFDSTAPYQQPTSQHMYYSPYDQHQT 155
Query: 416 NGAQ----PGAAYTPPPNLAPYNKNEVPLTSLVPSSGGMPSI 529
+G P +A P PN APY+ + L S P S G SI
Sbjct: 156 SGYSSAPPPSSAPAPNPNPAPYSSS---LYSAPPYSSGGSSI 194
>At2g27630.1 68415.m03350 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF04780:
Protein of unknown function (DUF629), PF04781: Protein
of unknown function (DUF627)
Length = 1122
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 211 LARFRDVKHYPCSMHDCCLL*P 146
L FRD+K PCS+ DC + P
Sbjct: 353 LVMFRDLKILPCSVRDCVMQYP 374
>At1g11820.1 68414.m01358 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 511
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 320 SSSAYVETMYNAWLADPNSVHASWDAFFRNAT 415
+SS Y+ ++N L P ASW F+ N+T
Sbjct: 327 TSSVYIYELFNEDLRAPPVSEASWGLFYGNST 358
>At4g08390.2 68417.m01386 L-ascorbate peroxidase, stromal (sAPX)
identical to stromal ascorbate peroxidase [Arabidopsis
thaliana] gi|1419388|emb|CAA67425
Length = 372
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 233 LLNKPQTAAVSVNANRLKSSTAAEPFLNGSSSAYVETM 346
LL+ P T + ++ L+S+TAA L SSS+ T+
Sbjct: 13 LLSPPPTTTTTTMSSSLRSTTAASLLLRSSSSSSRSTL 50
>At4g08390.1 68417.m01385 L-ascorbate peroxidase, stromal (sAPX)
identical to stromal ascorbate peroxidase [Arabidopsis
thaliana] gi|1419388|emb|CAA67425
Length = 372
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 233 LLNKPQTAAVSVNANRLKSSTAAEPFLNGSSSAYVETM 346
LL+ P T + ++ L+S+TAA L SSS+ T+
Sbjct: 13 LLSPPPTTTTTTMSSSLRSTTAASLLLRSSSSSSRSTL 50
>At5g49770.1 68418.m06164 leucine-rich repeat transmembrane protein
kinase, putative
Length = 946
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 49 LKISIKGEN*LNLDWTARPSFCSNSVKGLTH 141
L+ + G+N + LDWT R S KGL +
Sbjct: 715 LRDGLSGKNGVKLDWTRRLKIALGSGKGLAY 745
>At5g41680.2 68418.m05065 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; similar to
receptor-like protein kinase (GI:4008006) [Arabidopsis
thaliana]; similar to receptor-like kinase RHG1
(GI:21239380) (GI:21239382) [Glycine max]
Length = 333
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -1
Query: 443 CMRRLAELRLSHCGKMHPKTRVRSLGRRAMHCTWSRRKLNWS 318
C + +L L+H K P+T +RS G A T +R+ +S
Sbjct: 194 CYGCICDLGLTHITKSLPQTTLRSSGYHAPEITDTRKSTQFS 235
>At5g41680.1 68418.m05064 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; similar to
receptor-like protein kinase (GI:4008006) [Arabidopsis
thaliana]; similar to receptor-like kinase RHG1
(GI:21239380) (GI:21239382) [Glycine max]
Length = 359
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -1
Query: 443 CMRRLAELRLSHCGKMHPKTRVRSLGRRAMHCTWSRRKLNWS 318
C + +L L+H K P+T +RS G A T +R+ +S
Sbjct: 220 CYGCICDLGLTHITKSLPQTTLRSSGYHAPEITDTRKSTQFS 261
>At5g49780.1 68418.m06165 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1006
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 49 LKISIKGEN*LNLDWTARPSFCSNSVKGLTH 141
L+ S+ G++ + LDWT R S KGL +
Sbjct: 764 LRDSLSGKSGIRLDWTRRLRIALGSGKGLAY 794
>At1g61850.1 68414.m06979 patatin family protein similar to
membrane-associated calcium-independent phospholipase A2
gamma; IPLA2 gamma [Homo sapiens] GI:8453174; contains
Patatin domain PF01734, PF00514:
Armadillo/beta-catenin-like repeat
Length = 1265
Score = 27.1 bits (57), Expect = 8.8
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = -1
Query: 431 LAELRLSHCGKMHPKTRVRSLGRRAMHCTW---SRRKLNWSH*GRVPPRWSSSACWHLL 264
L EL L H + P RSLG+RA + ++ SR KL+ P + SS+C H L
Sbjct: 204 LVELSLEHNKLVRPLLDFRSLGQRAENTSYFGASRHKLS----AFSPLIFRSSSCHHPL 258
>At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-related
similar to glucan endo-1,3-beta-glucosidase precursor
SP:P52409 from [Triticum aestivum]
Length = 330
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 407 NATNGAQPGAAYTPPPNLAPYNKNEVPLTSLVPSSGGMPSISAGSP 544
++T+ TP P+ N+ V T ++P+ GG+ I G+P
Sbjct: 222 SSTSTPMTAGTTTPTPSTQTVNQPPVTSTPIIPTGGGI--IGVGTP 265
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,735,199
Number of Sequences: 28952
Number of extensions: 272256
Number of successful extensions: 887
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1102220672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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