Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0472
         (398 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   1.9  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   2.6  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   3.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   7.8  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 47  HLHHAGRHHGSEH 85
           H HHAG H  ++H
Sbjct: 322 HHHHAGHHIHAQH 334


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 2.6
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 57  TQVGTTEASTPRYNHKLRFPNFKSRTNSIIQRNF 158
           T   +  +ST R N       F+ R NSI+ +NF
Sbjct: 384 TTANSCRSSTFRNNRDEYNVCFRPRNNSILIKNF 417


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 214 SSTDTLRKLSDDLSRKHLSDLIEAEEDEVSSSLPDKP 324
           S  +TLR   + +  + L DL+  +E  VSSS    P
Sbjct: 99  SKVETLRMAVEYI--RSLEDLLALDESTVSSSTSSIP 133


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 7/26 (26%), Positives = 12/26 (46%)
 Frame = -2

Query: 379 YRCPLSISRCGWMLCDMYEVYPVDCY 302
           + C L I  C +  C  + ++P   Y
Sbjct: 288 FYCALIILLCIYYFCRAFIIFPTHFY 313


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,859
Number of Sequences: 336
Number of extensions: 1503
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)