Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0472
(398 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0404 + 3071412-3071464,3073572-3074970 28 2.4
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 28 3.1
03_06_0524 - 34502286-34502609,34502998-34503084,34503280-345033... 28 3.1
12_01_0544 - 4279237-4279274,4279499-4279594,4279759-4279918 27 5.5
08_01_0768 + 7408004-7408159,7409101-7409297,7427823-7428206,742... 27 5.5
08_01_0740 - 6807700-6807735,6808911-6809066 27 5.5
04_02_0031 + 8874025-8874180,8882152-8882550,8882651-8882987,888... 27 5.5
01_07_0007 + 40378472-40378636,40378726-40378858,40378941-403791... 27 5.5
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 27 5.5
01_05_0240 - 19763908-19763973,19764436-19764591 27 5.5
08_01_0513 + 4475696-4477606,4478479-4478496,4478832-4478999 27 7.2
03_02_0565 - 9484045-9484335,9484621-9484686,9484790-9484867,948... 27 7.2
02_05_1226 + 35071407-35072001,35072139-35072836 27 7.2
01_05_0620 + 23742950-23743794,23745705-23746508,23746593-23747793 27 7.2
12_02_0362 + 17998110-17998345,17998877-17998958,18000309-180003... 26 9.5
12_01_0038 - 312152-312748,312930-313362,313572-314440,314535-31... 26 9.5
11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-29... 26 9.5
02_04_0452 + 23044190-23045227 26 9.5
>11_01_0404 + 3071412-3071464,3073572-3074970
Length = 483
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +2
Query: 29 RHTRPAHLHHAGRHHGSEHSEIQSQTTFSE 118
+H + AH HH RHH H + + +E
Sbjct: 116 QHGKIAHHHHHHRHHSKNHGSDEEEHDMNE 145
>06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 27.9 bits (59), Expect = 3.1
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Frame = +1
Query: 181 PSKPKLAFPTGSSTDTLRKLSDD----LSRKHLSDLIEA--EEDEVSSSLPDKPRTYRKA 342
P + +T TL K S++ + +D +E EEDE S+ LP+ T+ K
Sbjct: 1116 PQDDSASVEPSENTITLEKASEEDEGSVKPSEGNDALEKTLEEDEASAKLPEDSTTFEKP 1175
Query: 343 SNHSVILTEDTD 378
S T+ T+
Sbjct: 1176 SEKDDAGTKQTE 1187
>03_06_0524 -
34502286-34502609,34502998-34503084,34503280-34503360,
34503962-34504114,34504898-34504954,34505050-34505296,
34505412-34505527,34506074-34506225,34506713-34506902,
34506976-34507169,34507256-34507388
Length = 577
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 196 LAFPTGSSTDTLRKLSDDLSRKHLSDLIEAEEDEVSSSLPD 318
+ FPTGS DT+ +D +R+ ++A V+ S PD
Sbjct: 510 IVFPTGSRFDTMYSYTDKNARQEWVAHLQAGAGIVADSKPD 550
>12_01_0544 - 4279237-4279274,4279499-4279594,4279759-4279918
Length = 97
Score = 27.1 bits (57), Expect = 5.5
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 367 LSISRCGWMLCDMYEVYPV 311
LS++R GW LC ++ +Y V
Sbjct: 33 LSMARMGWKLCHVFRLYTV 51
>08_01_0768 +
7408004-7408159,7409101-7409297,7427823-7428206,
7428456-7428837
Length = 372
Score = 27.1 bits (57), Expect = 5.5
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 367 LSISRCGWMLCDMYEVYPV 311
LS++R GW LC ++ +Y V
Sbjct: 33 LSMARMGWKLCHVFRLYTV 51
>08_01_0740 - 6807700-6807735,6808911-6809066
Length = 63
Score = 27.1 bits (57), Expect = 5.5
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 367 LSISRCGWMLCDMYEVYPV 311
LS++R GW LC ++ +Y V
Sbjct: 33 LSMARMGWKLCHVFRLYTV 51
>04_02_0031 +
8874025-8874180,8882152-8882550,8882651-8882987,
8883234-8884060
Length = 572
Score = 27.1 bits (57), Expect = 5.5
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 367 LSISRCGWMLCDMYEVYPV 311
LS++R GW LC ++ +Y V
Sbjct: 33 LSMARMGWKLCHVFRLYTV 51
>01_07_0007 +
40378472-40378636,40378726-40378858,40378941-40379111,
40379295-40379373,40379477-40379590,40379664-40379730,
40379819-40379924,40380009-40380067,40380258-40380367,
40380455-40380588,40380717-40380802,40380930-40381019,
40381104-40381283
Length = 497
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 220 TDTLRKLSDDLSRKHLSDLIEAEED 294
T L++L DD+ RK+L ++ +ED
Sbjct: 389 TSILQRLGDDIDRKNLPQILYEDED 413
>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +1
Query: 262 HLSDLIEAEEDEVSSSLPDKPRTYRKASNHSVILTEDTDSFI 387
HL I+ +E+E+S+ + +K ++ SN + ++D I
Sbjct: 1459 HLEKTIDEKEEEISARVQEKREAIKQLSNAIIYHKNNSDDLI 1500
>01_05_0240 - 19763908-19763973,19764436-19764591
Length = 73
Score = 27.1 bits (57), Expect = 5.5
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 367 LSISRCGWMLCDMYEVYPV 311
LS++R GW LC ++ +Y V
Sbjct: 33 LSMARMGWKLCHVFRLYTV 51
>08_01_0513 + 4475696-4477606,4478479-4478496,4478832-4478999
Length = 698
Score = 26.6 bits (56), Expect = 7.2
Identities = 22/62 (35%), Positives = 27/62 (43%)
Frame = +1
Query: 193 KLAFPTGSSTDTLRKLSDDLSRKHLSDLIEAEEDEVSSSLPDKPRTYRKASNHSVILTED 372
K+ FP S T ++ SD +HLS L E E +PD R Y TED
Sbjct: 538 KINFPVHSWTASVNGASD-FGIQHLSTLTEVEVGLGCFFIPDTRRMYHPT-------TED 589
Query: 373 TD 378
TD
Sbjct: 590 TD 591
>03_02_0565 -
9484045-9484335,9484621-9484686,9484790-9484867,
9485005-9485157,9485271-9485356,9485445-9485551,
9485685-9485752,9485890-9485912,9487627-9487732,
9487772-9487899,9487989-9488065,9488126-9488131,
9488206-9488264
Length = 415
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 223 DTLRKLSDDLSRKHLSDLIEAEEDEVSSSLPDKPRTYRKASNHSVIL 363
D L L+D+L RK LI + +++ L P RKAS ++ L
Sbjct: 35 DDLDMLTDELERKRYRTLILMADTFLANDLRQFPSAKRKASLYTSTL 81
>02_05_1226 + 35071407-35072001,35072139-35072836
Length = 430
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 15 SRGFNDTHDPRICITQVGTTEASTPRYNHK-LRFP 116
+RG D + +T++ T E+S PR+ K L FP
Sbjct: 135 ARGGGDLGSFPVDLTEIATAESSNPRFGGKALSFP 169
>01_05_0620 + 23742950-23743794,23745705-23746508,23746593-23747793
Length = 949
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/50 (26%), Positives = 29/50 (58%)
Frame = +1
Query: 220 TDTLRKLSDDLSRKHLSDLIEAEEDEVSSSLPDKPRTYRKASNHSVILTE 369
T RKL +L R+ SD+ + + D+V L D+ R++ ++ + +++ +
Sbjct: 242 TKIFRKLLFELDREQYSDINDLDRDDV--QLIDELRSFLQSRRYLIVIDD 289
>12_02_0362 +
17998110-17998345,17998877-17998958,18000309-18000392,
18000600-18000734,18001395-18001570,18001654-18001805,
18003730-18004575,18004961-18005301
Length = 683
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 47 HLHHAGRHHGSEHSEIQSQTTFSELQIED 133
H A HHG EHS ++ QT ++ D
Sbjct: 346 HSTGAPSHHGVEHSNLEKQTVDQKMLQND 374
>12_01_0038 -
312152-312748,312930-313362,313572-314440,314535-314584,
314589-315192,315674-315718,316100-316317,317020-317332,
318681-318716
Length = 1054
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 271 DLIEAEEDEVSSSLPD-KPRTYRKASNHSVILTEDTDSF 384
DL+ E S L D KPR + A +S L EDT S+
Sbjct: 292 DLVVFSEVHGMSELNDGKPRKIKNARPYSFTLEEDTTSY 330
>11_01_0039 -
290960-291086,291615-291714,291809-292013,292466-292513,
295071-295646,295828-296260,296470-297338,297433-298227,
298709-298753,299135-299352,300055-300364,302715-302984
Length = 1331
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 271 DLIEAEEDEVSSSLPD-KPRTYRKASNHSVILTEDTDSF 384
DL+ E S L D KPR + A +S L EDT S+
Sbjct: 369 DLVVFSEVHGMSELNDGKPRKIKNARPYSFTLEEDTTSY 407
>02_04_0452 + 23044190-23045227
Length = 345
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 50 LHHAGRHHGSEHSEIQSQT 106
LHHAG HG HS S +
Sbjct: 171 LHHAGHGHGHAHSHSHSHS 189
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,208,051
Number of Sequences: 37544
Number of extensions: 156821
Number of successful extensions: 546
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 682720236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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