Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0472
(398 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23043| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.20
SB_8943| Best HMM Match : LTXXQ (HMM E-Value=0.45) 32 0.20
SB_32823| Best HMM Match : Late_protein_L1 (HMM E-Value=2.5) 29 1.1
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 29 1.1
SB_58171| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_36678| Best HMM Match : Aa_trans (HMM E-Value=1.8e-07) 29 1.8
SB_23516| Best HMM Match : Glyco_tran_28_C (HMM E-Value=0.004) 29 1.8
SB_6224| Best HMM Match : FCH (HMM E-Value=3.1) 28 2.4
SB_46059| Best HMM Match : Astacin (HMM E-Value=2.8e-17) 28 2.4
SB_26078| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.45) 28 2.4
SB_46779| Best HMM Match : PP2C_C (HMM E-Value=1.7) 28 3.2
SB_3099| Best HMM Match : TFIIE_beta (HMM E-Value=1.8e-20) 27 4.3
SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_7844| Best HMM Match : RasGEF (HMM E-Value=0.00058) 27 5.6
SB_53888| Best HMM Match : TSP_3 (HMM E-Value=9.2e-11) 27 5.6
SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 27 7.4
SB_34282| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_24047| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_15300| Best HMM Match : HemolysinCabind (HMM E-Value=8.9) 27 7.4
SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29) 26 9.8
SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07) 26 9.8
SB_10358| Best HMM Match : Gp5_C (HMM E-Value=5.9) 26 9.8
>SB_23043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 31.9 bits (69), Expect = 0.20
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Frame = +1
Query: 172 IRCPSKPKLAFPTGSSTDTLR-----KLSDDLSRKHLSDLIEAEEDEVSSSLPDKPRTYR 336
I+C +PKL +D L ++ + R +S ++ +D VS LPD+PR +R
Sbjct: 19 IKC-EQPKLTTTRKMRSDALTDEQVTEIEEFYRRDDISQMMPGNKDFVSVKLPDRPREHR 77
Query: 337 KASNHSVILTEDTDSF 384
+ N ++E + F
Sbjct: 78 QKRNLLYKISETHELF 93
>SB_8943| Best HMM Match : LTXXQ (HMM E-Value=0.45)
Length = 415
Score = 31.9 bits (69), Expect = 0.20
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Frame = +1
Query: 172 IRCPSKPKLAFPTGSSTDTLR-----KLSDDLSRKHLSDLIEAEEDEVSSSLPDKPRTYR 336
I+C +PKL +D L ++ + R +S ++ +D VS LPD+PR +R
Sbjct: 19 IKC-EQPKLTTTRKMRSDALTDEQVTEIEEFYRRDDISQMMPGNKDFVSVKLPDRPREHR 77
Query: 337 KASNHSVILTEDTDSF 384
+ N ++E + F
Sbjct: 78 QKRNLLYKISETHELF 93
>SB_32823| Best HMM Match : Late_protein_L1 (HMM E-Value=2.5)
Length = 585
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 20 RFQRHTRPAHLHHAGRHHGSEHSEIQSQTTFS 115
R + R H HH H+G + SE QTTFS
Sbjct: 490 RVAKENRHRHRHHRNSHYGYQSSE-SIQTTFS 520
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 223 DTLRKLSDDLSRKHLSDLIEAEEDEVSSSLPDKPRTYRKASNHSVILTEDTDS 381
D RK H +D I E+D++++ L + + K +L +DT+S
Sbjct: 3700 DASRKNDKTAELTHENDKIRQEKDDIANELMNLKEKFAKVEEEYRVLVKDTES 3752
>SB_58171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 235 KLSDDLSRKHLSDLIEAEEDEVSSSLPDKPRTYRKASNHS 354
+L ++LSR D+++AE + + S L P+ K HS
Sbjct: 71 RLQEELSRAQQVDILQAEVNALKSLLIQPPKKNHKMRRHS 110
>SB_36678| Best HMM Match : Aa_trans (HMM E-Value=1.8e-07)
Length = 956
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -3
Query: 363 QYHAVVGCFAICTRFIR*TATDLVFFGFYQI 271
+YH C T R ATDLVF GF++I
Sbjct: 196 EYHTDQRCVTPTTALRRILATDLVFRGFFRI 226
>SB_23516| Best HMM Match : Glyco_tran_28_C (HMM E-Value=0.004)
Length = 969
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 211 GSSTDTLRKLSDDLSRKHLSDLIEAEED-EVSSSLPDK 321
G+ L KL DDL K +SD+++ ED E SS+ K
Sbjct: 868 GTCEQKLLKLMDDLGGKDISDVMKEMEDFEFRSSMESK 905
>SB_6224| Best HMM Match : FCH (HMM E-Value=3.1)
Length = 690
Score = 28.3 bits (60), Expect = 2.4
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +1
Query: 166 KIIRCPSKPKLAFPTGSSTDTLRKLSDDLSRKHLSDLIEAEEDEVSSSLPDKPRTYRKAS 345
K++ P++ FPT + + L+ DL K +S +I E + +SSS ++A
Sbjct: 414 KVLEICKNPRVFFPTNINRIEVLTLNYDLFIKTVSTIICVERNAMSSS--------KQAL 465
Query: 346 NHSVILTEDTDSF 384
N +++L E D F
Sbjct: 466 NTALLLLECKDVF 478
>SB_46059| Best HMM Match : Astacin (HMM E-Value=2.8e-17)
Length = 1775
Score = 28.3 bits (60), Expect = 2.4
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 190 PKLAFPTGSSTDTLRKLSDDLSRKHLSDLIEAEED-EVSSSLPDKPRTYRKASNH-SVIL 363
PK G+ T T+++ SDD+S KH+ IE ++ S + PD N S++
Sbjct: 919 PKEKKKNGNGT-TMKEASDDVSNKHVPHSIEPTKNINTSKNDPDLSTKGSTTKNKVSLLP 977
Query: 364 TEDTD 378
DTD
Sbjct: 978 NVDTD 982
>SB_26078| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.45)
Length = 671
Score = 28.3 bits (60), Expect = 2.4
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 181 PSKPKLAFPTGSSTDTLRKLSDDLSRKHLSDLIEAEEDEVSSSLPDKPRTY 333
P+ +LA P+ SS S L+ S+ E+E +S+LP PR Y
Sbjct: 158 PASSRLASPSSSSPLASSSSSSPLASSSSSE--GENEEEKNSALPGSPRNY 206
>SB_46779| Best HMM Match : PP2C_C (HMM E-Value=1.7)
Length = 405
Score = 27.9 bits (59), Expect = 3.2
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 184 SKPKLAFPTGSSTDTLRKLSDDLSRKHLSDLIEAEEDEVSSSLPDKPRTYRKASNHS 354
+K +L G T+ + +SD+ R H E++ S LP KPRT ++ +HS
Sbjct: 68 AKKQLEKKIGKRTEVI--ISDNELRSHSFGSFFKEQNS-DSLLPHKPRTISESGSHS 121
>SB_3099| Best HMM Match : TFIIE_beta (HMM E-Value=1.8e-20)
Length = 318
Score = 27.5 bits (58), Expect = 4.3
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Frame = +1
Query: 190 PKLAFPTGSSTDTLRKLSDDLSRKHLSDLIEAEE---------DEVSSSLPDKPRTYRKA 342
PKLAF G + + D +K L L+E E D+V SLPD + R
Sbjct: 127 PKLAFKDGKFAFSPKYHIRD--KKQLVKLLEKHEERGHGGILLDDVRESLPDADKIVRNV 184
Query: 343 SNHSVILTEDTDSFII 390
S+ + +T D ++
Sbjct: 185 SSRIMFITRSCDKKVL 200
>SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1706
Score = 27.1 bits (57), Expect = 5.6
Identities = 14/66 (21%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = +1
Query: 172 IRCPSKPKLAFPTGSSTDTL----RKLSDDLSRKHLSDLIEAEEDEVSSSLPDKPRTYRK 339
+ P KP G STDT+ + + D+L+ K + ++ + +PD
Sbjct: 1634 VNLPEKPNCKGTNGVSTDTICPKNKPIDDNLTTKLYNGSLDPIRESKKKEVPDVAVAVNG 1693
Query: 340 ASNHSV 357
+++H++
Sbjct: 1694 STDHTI 1699
>SB_7844| Best HMM Match : RasGEF (HMM E-Value=0.00058)
Length = 1299
Score = 27.1 bits (57), Expect = 5.6
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 208 TGSSTDTLRKLSDDLSRKHLSDLIEAEEDEVSSSLPDKPRT 330
T S++D + SDD SD++ A++D+V+ S D P T
Sbjct: 489 TPSASD-VPTTSDDQVTPSASDVLTAKDDQVTPSARDDPTT 528
>SB_53888| Best HMM Match : TSP_3 (HMM E-Value=9.2e-11)
Length = 1012
Score = 27.1 bits (57), Expect = 5.6
Identities = 17/67 (25%), Positives = 27/67 (40%)
Frame = +1
Query: 178 CPSKPKLAFPTGSSTDTLRKLSDDLSRKHLSDLIEAEEDEVSSSLPDKPRTYRKASNHSV 357
C S P S D DL+R L+ +++ D+ S D +T + S+H
Sbjct: 243 CDSDLDQTSPCDSDHDQTSPCDSDLNRHPLTSPCDSDHDQTSPRDSDHDQTSPRDSDHDQ 302
Query: 358 ILTEDTD 378
D+D
Sbjct: 303 TSPCDSD 309
>SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 3804
Score = 26.6 bits (56), Expect = 7.4
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +3
Query: 78 ASTPRYNHKLRFPNFKSRTNSIIQRNFFFENHKMPVETKISFSDGQLDG 224
A TPR H+L N K R ++II + F NH+ + S G L G
Sbjct: 1050 AGTPR--HELGIGNRKVRDSAIIASSQFDGNHRASLARLRSRQRGHLKG 1096
>SB_34282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 26.6 bits (56), Expect = 7.4
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +1
Query: 175 RCPSKPKLAFPTGSSTDTLRKLSDDLSRKHLSDLIEAEEDEV-SSSLPDKPRTYRKASNH 351
+C + K P S + ++ + SDL E EEDE + SL + T K N
Sbjct: 28 KCSANEKRTGPKQSDAENQELSEENAGDEKTSDLDENEEDEEGNKSLDEDGLTESKDENQ 87
Query: 352 SVILTEDTD 378
ED +
Sbjct: 88 ETNHDEDDE 96
>SB_24047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2905
Score = 26.6 bits (56), Expect = 7.4
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +1
Query: 280 EAEEDEVSSSLPDKPRTYRK---ASNHSVIL 363
E +D+VS+ DKP T R AS+HS++L
Sbjct: 529 EERKDKVSTDAADKPSTPRSNTAASDHSLLL 559
>SB_15300| Best HMM Match : HemolysinCabind (HMM E-Value=8.9)
Length = 159
Score = 26.6 bits (56), Expect = 7.4
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 208 TGSSTDTLRKLSDDLSRKHLSDLIEAEEDEVSSSLPDKPRTYRK 339
T + D+L +++ S K ++ + + DE+ SLP K + +K
Sbjct: 58 TDAEQDSLGDKTEESSAKENDEMADMQMDELDFSLPTKKKKKKK 101
>SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29)
Length = 1779
Score = 26.2 bits (55), Expect = 9.8
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +2
Query: 2 RSNSFARFQRHTRPAHLHHAGRHH--GSEHSEI--QSQTTFSELQIED 133
R+ + R+ H HH +HH + H ++ Q Q S+L++ED
Sbjct: 342 RNKHYRHHDRNHHHRHHHHHHKHHHKAANHHKLSTQKQRKNSDLKMED 389
>SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07)
Length = 807
Score = 26.2 bits (55), Expect = 9.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 56 HAGRHHGSEHSEIQSQTTFSELQI 127
H GR HG+ ++ Q TF++ QI
Sbjct: 251 HVGRAHGNNLKDLAKQKTFTDGQI 274
>SB_10358| Best HMM Match : Gp5_C (HMM E-Value=5.9)
Length = 189
Score = 26.2 bits (55), Expect = 9.8
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 223 DTLRKLSDD-LSRKHLSDLIEAEEDEVSSSLPDKPRTY 333
D L +++ D L++ + LI+ +D ++ S+PD R Y
Sbjct: 30 DRLTQVNQDRLTQVNQDHLIQVNQDHLTQSVPDNLRAY 67
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,885,759
Number of Sequences: 59808
Number of extensions: 194333
Number of successful extensions: 722
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 703143849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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