Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0471
         (591 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0509 - 29921224-29924589                                         29   3.7  
08_01_0421 - 3735155-3736067,3736154-3736176                           28   4.8  

>01_06_0509 - 29921224-29924589
          Length = 1121

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 130 ATNGFHVCCPLPAGSFAIQY 71
           ATNGFH+ C + +G F   Y
Sbjct: 803 ATNGFHIACQIGSGGFGDVY 822


>08_01_0421 - 3735155-3736067,3736154-3736176
          Length = 311

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -3

Query: 418 WDEGDMIQFVNFVKNFCDLYFFFVNNSFIACNLAFKP 308
           W  G ++ F  + +  CDL FF+ N + +  + + KP
Sbjct: 270 WKVGGLVPFKYWTRLRCDLRFFWPNGTAVDLSCSSKP 306


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,863,950
Number of Sequences: 37544
Number of extensions: 247212
Number of successful extensions: 417
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)