Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0471
         (591 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X15786-1|CAA33787.1|  899|Homo sapiens retII protein.                  29   9.3  
AY644768-1|AAV85456.1|  731|Homo sapiens cell proliferation-indu...    29   9.3  
AJ132949-1|CAB36967.1|  585|Homo sapiens rfg5 protein protein.         29   9.3  
AF085199-1|AAD09753.1|  731|Homo sapiens golgin-84 protein.            29   9.3  

>X15786-1|CAA33787.1|  899|Homo sapiens retII protein.
          Length = 899

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = +2

Query: 35  PKDMEAISSSDNILNGK*TGRQWTANMETISRVPVSRS 148
           PK     S++DNI N K T    TAN++  SR PV  S
Sbjct: 58  PKSTYISSAADNIRNQKATILAGTANVKVGSRTPVEAS 95


>AY644768-1|AAV85456.1|  731|Homo sapiens cell
           proliferation-inducing gene 31 protein.
          Length = 731

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = +2

Query: 35  PKDMEAISSSDNILNGK*TGRQWTANMETISRVPVSRS 148
           PK     S++DNI N K T    TAN++  SR PV  S
Sbjct: 58  PKSTYISSAADNIRNQKATILAGTANVKVGSRTPVEAS 95


>AJ132949-1|CAB36967.1|  585|Homo sapiens rfg5 protein protein.
          Length = 585

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = +2

Query: 35  PKDMEAISSSDNILNGK*TGRQWTANMETISRVPVSRS 148
           PK     S++DNI N K T    TAN++  SR PV  S
Sbjct: 58  PKSTYISSAADNIRNQKATILAGTANVKVGSRTPVEAS 95


>AF085199-1|AAD09753.1|  731|Homo sapiens golgin-84 protein.
          Length = 731

 Score = 29.5 bits (63), Expect = 9.3
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = +2

Query: 35  PKDMEAISSSDNILNGK*TGRQWTANMETISRVPVSRS 148
           PK     S++DNI N K T    TAN++  SR PV  S
Sbjct: 58  PKSTYISSAADNIRNQKATILAGTANVKVGSRTPVEAS 95


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,844,065
Number of Sequences: 237096
Number of extensions: 1472133
Number of successful extensions: 1808
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1808
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)