Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0467
         (546 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IBW2 Cluster: Putative uncharacterized protein MAL7P1...    33   4.3  
UniRef50_O96259 Cluster: Putative uncharacterized protein PFB083...    33   4.3  
UniRef50_UPI000155C660 Cluster: PREDICTED: similar to SJCHGC0197...    33   5.7  
UniRef50_A5IKD9 Cluster: LamG domain protein jellyroll fold doma...    33   5.7  
UniRef50_Q7RI62 Cluster: Methionyl-tRNA formyltransferase homolo...    33   5.7  
UniRef50_Q38DH0 Cluster: Putative uncharacterized protein; n=1; ...    32   7.5  
UniRef50_Q7YN59 Cluster: RNA polymerase C2; n=1; Eimeria tenella...    32   9.9  
UniRef50_A0BU86 Cluster: Chromosome undetermined scaffold_129, w...    32   9.9  
UniRef50_P33746 Cluster: Sol locus transcriptional repressor; n=...    32   9.9  

>UniRef50_Q8IBW2 Cluster: Putative uncharacterized protein
           MAL7P1.65; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL7P1.65 - Plasmodium
           falciparum (isolate 3D7)
          Length = 954

 Score = 33.1 bits (72), Expect = 4.3
 Identities = 26/74 (35%), Positives = 37/74 (50%)
 Frame = -3

Query: 445 NNEAYKLTIIDCAIYMYIYHKIELHLQKRLGPHENLILQ*CIPK*ISITPTMWHNSNHKK 266
           NNE  K  I DC IY++I+ K   HL+  +      I Q  I K I+I   ++H   +K 
Sbjct: 447 NNEYKKHLIFDCYIYIFIFFKYIKHLRNTMKCKIEKI-QNNIKKIINIFINIYH--INKT 503

Query: 265 NIDKSLYNAGK*CN 224
            I+K+  N  K  N
Sbjct: 504 EINKNKCNVSKKVN 517


>UniRef50_O96259 Cluster: Putative uncharacterized protein PFB0835c;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFB0835c - Plasmodium falciparum
           (isolate 3D7)
          Length = 519

 Score = 33.1 bits (72), Expect = 4.3
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = -1

Query: 393 YTIK*NYIYKRDLVHTRI*YYNN-AFQNK*ALLQLCGIIVTIKKILTKAYIMQVNSV 226
           Y  K  Y+     + +     +N  F    A L  C  +V IKK L K  +MQ+NS+
Sbjct: 381 YACKDTYVQSNHFISSEFKNIHNFTFGGHLAYLSFCHAMVVIKKFLPKPILMQINSI 437


>UniRef50_UPI000155C660 Cluster: PREDICTED: similar to SJCHGC01974
           protein; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
           similar to SJCHGC01974 protein - Ornithorhynchus
           anatinus
          Length = 438

 Score = 32.7 bits (71), Expect = 5.7
 Identities = 21/81 (25%), Positives = 36/81 (44%)
 Frame = +1

Query: 163 YLVLFLPVYM*IENFSAIYTSYTIYLHYISFCQYFFYGYYYAT*LE*CLFILECIIVVSN 342
           Y+ +FL +Y  +     IY    IY  YISFC Y    Y Y       L+I   + +   
Sbjct: 304 YIYIFLYIYPSVFISFCIYILLHIYPAYISFCIYILM-YIYPNVYIYILYIYPSVYIYIL 362

Query: 343 SRVDQVSFVDVVLFYGIYTYI 405
             +  + ++ ++L+  I  Y+
Sbjct: 363 LCIHIILYIHIILYVFISFYL 383


>UniRef50_A5IKD9 Cluster: LamG domain protein jellyroll fold domain
           protein precursor; n=2; Thermotoga|Rep: LamG domain
           protein jellyroll fold domain protein precursor -
           Thermotoga petrophila RKU-1
          Length = 247

 Score = 32.7 bits (71), Expect = 5.7
 Identities = 16/57 (28%), Positives = 29/57 (50%)
 Frame = +2

Query: 149 EKMLLTWFYFCLFICRLKTFQQYTLVTLFTCII*AFVNIFFMVTIMPHSWSNAYLFW 319
           + ++  + Y   F  +++ F Q+T  T F C I    N F  ++ +P+ W+N  L W
Sbjct: 84  DDLITDYDYSVSFWLKIEDFTQHT-TTFFGCYIDE-ENYFHWLSFVPYGWNNGTLLW 138


>UniRef50_Q7RI62 Cluster: Methionyl-tRNA formyltransferase homolog,
           putative; n=3; Plasmodium (Vinckeia)|Rep: Methionyl-tRNA
           formyltransferase homolog, putative - Plasmodium yoelii
           yoelii
          Length = 655

 Score = 32.7 bits (71), Expect = 5.7
 Identities = 20/48 (41%), Positives = 28/48 (58%)
 Frame = +1

Query: 37  ISYILSFVLLLTFLRSPKKGLSYFFKMVTLLANETNRRENVTYLVLFL 180
           ISY++  +LL+TFLRS    LSY  K+      + N   NV YL+ F+
Sbjct: 5   ISYVVQ-ILLITFLRSYSYKLSYINKL--SFHKKNNTIGNVNYLIKFI 49


>UniRef50_Q38DH0 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 128

 Score = 32.3 bits (70), Expect = 7.5
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +2

Query: 170 FYFCLFICRLKTFQQ-YTLVTLFTCII*AFVNIFFMVTIMPHSWSNAYLFWN 322
           F+F LF C        + L  +F CI   FV+ F +   +P S+ ++YL +N
Sbjct: 41  FFFFLFFCSCCCCSSCFCLFPIFRCIQFVFVHFFLIFLSVPLSFESSYLPFN 92


>UniRef50_Q7YN59 Cluster: RNA polymerase C2; n=1; Eimeria
           tenella|Rep: RNA polymerase C2 - Eimeria tenella
          Length = 1050

 Score = 31.9 bits (69), Expect = 9.9
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
 Frame = -1

Query: 405 YICIYTIK*NYIYKRDLVHTRI*YYNNAFQNK*ALLQLCGIIVTIKKILTKAYIMQVNS- 229
           ++ IY I  NYIY    + T   Y+ N F NK       GII+  KK  +   I  + S 
Sbjct: 736 FLHIYYIYKNYIY----ITTYYTYWKNLFSNKYIFNFFRGIILNKKKYYSNNSIKDITSG 791

Query: 228 ---VTSVYC*KVF-NLHINRQK*NQVSNIF 151
              +  ++  K+  N++   QK N ++NIF
Sbjct: 792 LILIEIIFEAKILPNIYFIPQKLNILTNIF 821


>UniRef50_A0BU86 Cluster: Chromosome undetermined scaffold_129,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_129,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 417

 Score = 31.9 bits (69), Expect = 9.9
 Identities = 14/54 (25%), Positives = 32/54 (59%)
 Frame = +1

Query: 22  IRHEEISYILSFVLLLTFLRSPKKGLSYFFKMVTLLANETNRRENVTYLVLFLP 183
           ++ ++I YIL+F+  +   ++  + L YFF+ +  + NE  + E++   +L +P
Sbjct: 308 LQEQKIKYILTFIGPVQQRKTRAEKLQYFFQKILQICNEQLKVESICIPLLAIP 361


>UniRef50_P33746 Cluster: Sol locus transcriptional repressor; n=1;
           Clostridium acetobutylicum|Rep: Sol locus
           transcriptional repressor - Clostridium acetobutylicum
          Length = 318

 Score = 31.9 bits (69), Expect = 9.9
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +1

Query: 10  RAAGIRHEEISYILSFVLLLTFLRSPKKGLSYFFKMVTLLANETNRRENVTYLVLFLPVY 189
           +A  +R + I+ + SF L    L  P++ L YF + V L  N     EN+ +       Y
Sbjct: 90  QAIKLRPKTINDVYSFALSYHILGEPERALKYFLRAVELQPNVGISYENLAWFYYLTGKY 149

Query: 190 -M*IENF 207
              IENF
Sbjct: 150 DKAIENF 156


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 495,059,518
Number of Sequences: 1657284
Number of extensions: 9576003
Number of successful extensions: 21230
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20971
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35405708495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)