Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0466
(578 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9XXW0 Cluster: Endonuclease and reverse transcriptase-... 346 2e-94
UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotei... 97 3e-19
UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-direct... 95 1e-18
UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-direct... 93 3e-18
UniRef50_UPI0000D578A9 Cluster: PREDICTED: similar to RNA-direct... 93 6e-18
UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Re... 80 4e-14
UniRef50_Q6UJ39 Cluster: Pol protein; n=1; Drosophila virilis|Re... 79 1e-13
UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile... 73 5e-12
UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase fr... 73 6e-12
UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase fr... 66 4e-10
UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster subgroup... 65 1e-09
UniRef50_Q6J4U7 Cluster: Pol protein; n=9; cellular organisms|Re... 60 4e-08
UniRef50_Q9GP60 Cluster: Pol protein; n=1; Drosophila melanogast... 59 6e-08
UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:... 59 9e-08
UniRef50_Q86GH0 Cluster: Pol protein; n=1; Drosophila americana|... 58 2e-07
UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein; ... 48 2e-04
UniRef50_Q24363 Cluster: Putative ORF2; n=2; melanogaster subgro... 45 0.001
UniRef50_Q9U4W1 Cluster: Pol-like protein; n=1; Aedes aegypti|Re... 43 0.005
UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria gla... 43 0.005
UniRef50_Q9C4A8 Cluster: Pol-like protein Pol-1; n=3; Tricholoma... 42 0.008
UniRef50_Q868S2 Cluster: Reverse transcriptase; n=4; Anopheles g... 40 0.042
UniRef50_Q4EC82 Cluster: Pol protein; n=2; Wolbachia endosymbion... 40 0.056
UniRef50_Q9TYX8 Cluster: Putative uncharacterized protein R11E3.... 38 0.13
UniRef50_Q8WPT4 Cluster: H25N7.03 protein; n=4; Trypanosoma bruc... 38 0.13
UniRef50_Q868Q6 Cluster: Reverse transcriptase; n=3; Anopheles g... 38 0.13
UniRef50_Q9Y026 Cluster: NL1Tc; n=2; Trypanosoma cruzi|Rep: NL1T... 37 0.30
UniRef50_UPI0000E47200 Cluster: PREDICTED: similar to endonuclea... 37 0.39
UniRef50_UPI0000D57951 Cluster: PREDICTED: similar to RNA-direct... 36 0.52
UniRef50_UPI0000E4721F Cluster: PREDICTED: similar to endonuclea... 36 0.69
UniRef50_A3TKA7 Cluster: Putative uncharacterized protein; n=1; ... 35 1.2
UniRef50_A6R5U3 Cluster: Predicted protein; n=10; Ajellomyces ca... 35 1.2
UniRef50_UPI00015B43B0 Cluster: PREDICTED: similar to reverse tr... 35 1.6
UniRef50_UPI0000E487CB Cluster: PREDICTED: similar to endonuclea... 35 1.6
UniRef50_Q868R0 Cluster: Reverse transcriptase; n=1; Anopheles g... 35 1.6
UniRef50_UPI0000E49F41 Cluster: PREDICTED: similar to endonuclea... 34 2.1
UniRef50_Q5B7Y7 Cluster: Putative uncharacterized protein; n=1; ... 34 2.1
UniRef50_A6RFJ6 Cluster: Predicted protein; n=6; Ajellomyces cap... 34 2.1
UniRef50_A6R9N6 Cluster: Predicted protein; n=24; Ajellomyces ca... 34 2.1
UniRef50_A7DJG3 Cluster: Endonuclease/exonuclease/phosphatase; n... 34 2.8
UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx mori... 33 3.7
UniRef50_UPI0000D57919 Cluster: PREDICTED: hypothetical protein,... 33 4.9
UniRef50_A1R6N4 Cluster: Putative glycosyl transferase, group 1 ... 33 4.9
UniRef50_A7Q5T8 Cluster: Chromosome chr14 scaffold_54, whole gen... 33 4.9
UniRef50_A4B3A9 Cluster: Putative uncharacterized protein; n=1; ... 33 6.4
UniRef50_Q4DQK2 Cluster: CYC2-like cyclin, putative; n=3; Trypan... 33 6.4
UniRef50_A7SX46 Cluster: Predicted protein; n=2; Nematostella ve... 33 6.4
UniRef50_UPI0000E476C1 Cluster: PREDICTED: similar to endonuclea... 32 8.5
UniRef50_Q604E4 Cluster: Endonuclease/exonuclease/phosphatase fa... 32 8.5
UniRef50_A0PTD7 Cluster: Putative uncharacterized protein; n=1; ... 32 8.5
>UniRef50_Q9XXW0 Cluster: Endonuclease and reverse
transcriptase-like protein; n=9; cellular organisms|Rep:
Endonuclease and reverse transcriptase-like protein -
Bombyx mori (Silk moth)
Length = 960
Score = 346 bits (851), Expect = 2e-94
Identities = 163/171 (95%), Positives = 167/171 (97%)
Frame = -1
Query: 578 IYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEALLGMG 399
IYYRRALHC+PLDPPAL NIEASVCRISLTGHAPIVIASVYLPP+KIVLSSDIEALL MG
Sbjct: 77 IYYRRALHCIPLDPPALVNIEASVCRISLTGHAPIVIASVYLPPEKIVLSSDIEALLSMG 136
Query: 398 SSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILD 219
SSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDI+APLTPTHYPLNIAHRPDILD
Sbjct: 137 SSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIIAPLTPTHYPLNIAHRPDILD 196
Query: 218 IALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTRTVVDCHTPG 66
IALLKNVTLRLHSIEVVSELDSDHRPVVMKLGR+PDSVPVTRTVVD HT G
Sbjct: 197 IALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRSPDSVPVTRTVVDWHTLG 247
>UniRef50_UPI00015B42A6 Cluster: PREDICTED: similar to polyprotein;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
polyprotein - Nasonia vitripennis
Length = 1249
Score = 96.7 bits (230), Expect = 3e-19
Identities = 52/137 (37%), Positives = 70/137 (51%)
Frame = -1
Query: 491 TGHAPIVIASVYLPPDKIVLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLD 312
T PI + + Y PP+ S + +L ILAGDLN KH W P G+ L
Sbjct: 439 TKSTPIRVIAFYAPPNPKEKFSSLHSLFNTNIPTILAGDLNAKHTSWGCIHNNPAGQSLL 498
Query: 311 ALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVM 132
+ I PL PTH+P H PDILDI L KN+TL +L SDH PV++
Sbjct: 499 KKIMKHNICIEPPLVPTHFPGCATHDPDILDIFLTKNITLP-SDPWTTEDLSSDHNPVLV 557
Query: 131 KLGRAPDSVPVTRTVVD 81
K+ +PD +P+T + +D
Sbjct: 558 KIPSSPDFLPITTSSID 574
>UniRef50_UPI0000D578AF Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=7; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 1336
Score = 94.7 bits (225), Expect = 1e-18
Identities = 58/164 (35%), Positives = 88/164 (53%), Gaps = 2/164 (1%)
Frame = -1
Query: 566 RALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEALLGMGSSVI 387
R H V L P L N+EA ++ T + P+ + + Y P +L D++ L + I
Sbjct: 558 RIKHSV-LATPDLRNMEAVGINVA-TANGPLRLFACYNRPQIPILEEDLQTLFDGNTPTI 615
Query: 386 LAGDLNCKHIRWNSHTTTPNGRRLDALVD-DLAFDIVAPLTPTHYPLNIAHRPDILDIAL 210
AGD N KHI W S + NG L+ D +L ++AP+ PT Y N DILD+A+
Sbjct: 616 AAGDFNAKHINWGSRRSNRNGNFLNGFTDQNLDISVMAPVEPTFY-RNSDGAADILDVAI 674
Query: 209 LKNVTLRLHSIEVVSELDSDHRPVVMKLG-RAPDSVPVTRTVVD 81
+KNV ++ + +++L SDH PV+M++G A D + T VD
Sbjct: 675 VKNVVHQVR-LTAINDLSSDHNPVLMQIGNEANDPIVCRYTSVD 717
>UniRef50_UPI0000D5792E Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase), partial; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to RNA-directed DNA polymerase from
mobile element jockey (Reverse transcriptase), partial -
Tribolium castaneum
Length = 830
Score = 93.5 bits (222), Expect = 3e-18
Identities = 55/163 (33%), Positives = 87/163 (53%), Gaps = 1/163 (0%)
Frame = -1
Query: 566 RALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEALLGMGSSVI 387
R H V L P L N+EA ++ T + P+ + + Y P +L D++ L + I
Sbjct: 201 RIKHSV-LATPDLRNMEAVGINVA-TANGPLRLFACYNRPQIPILEEDLQTLFDGNTPTI 258
Query: 386 LAGDLNCKHIRWNSHTTTPNGRRLDALVDD-LAFDIVAPLTPTHYPLNIAHRPDILDIAL 210
AGD N KHI W S + NG L+ D L ++AP+ PT Y N DILD+A+
Sbjct: 259 AAGDFNAKHINWGSRRSNRNGNILNGFTDQHLDISVMAPVEPTFY-RNSDGTADILDVAI 317
Query: 209 LKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTRTVVD 81
+KNV ++ + +++L SDH PV+M++G + T+ +V+
Sbjct: 318 VKNVVHQVR-LTAINDLSSDHNPVLMQIGNEANDPIFTKHLVN 359
>UniRef50_UPI0000D578A9 Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 894
Score = 92.7 bits (220), Expect = 6e-18
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
Frame = -1
Query: 566 RALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEALLGMGSSVI 387
R H V L P L N EA ++ T + P+ + + Y P +L D++ L + I
Sbjct: 371 RVKHSV-LAAPDLRNREAVSINVA-TANGPLRLFACYNRPQIPILEEDLQTLFDGNTLTI 428
Query: 386 LAGDLNCKHIRWNSHTTTPNGRRLDALVDD-LAFDIVAPLTPTHYPLNIAHRPDILDIAL 210
AGD N KHI W S + NG L+ D L ++AP+ PT Y N DILD+A+
Sbjct: 429 AAGDFNAKHINWESRRSNRNGNILNGFTDQHLDISVLAPVEPTFY-RNSDGAADILDVAI 487
Query: 209 LKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTRTVV 84
+KNV ++ + +++L SDH PV+M++G + P+ R +
Sbjct: 488 VKNVVHQVR-LSAINDLSSDHNPVLMQIGNEAND-PIIRDAI 527
>UniRef50_Q961V7 Cluster: GH03753p; n=5; melanogaster subgroup|Rep:
GH03753p - Drosophila melanogaster (Fruit fly)
Length = 888
Score = 79.8 bits (188), Expect = 4e-14
Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 4/119 (3%)
Frame = -1
Query: 470 IASVYLPPDKIVLSSD--IEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVD 300
+A+VY PP + +S D +E +G I AGD N KH W S TP G++L +AL
Sbjct: 104 LAAVYCPP-RFPISEDQFMEFFNTLGDRFIAAGDYNAKHTHWGSRLVTPKGKQLYNALTK 162
Query: 299 -DLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 126
+ D V+P PT++P + PD++D A+ K+V + + E +++L SDH PV + +
Sbjct: 163 PENKLDYVSPGKPTYWPADPRKIPDLIDFAITKHVPRNMVTAEALADLSSDHSPVFLNM 221
>UniRef50_Q6UJ39 Cluster: Pol protein; n=1; Drosophila virilis|Rep:
Pol protein - Drosophila virilis (Fruit fly)
Length = 891
Score = 78.6 bits (185), Expect = 1e-13
Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Frame = -1
Query: 533 ALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEALLG-MGSSVILAGDLNCKHI 357
+L ++ ++ R+ T IAS Y PP+ VL+ D L +G + ++ GD N KH
Sbjct: 85 SLPQLQCAIVRLR-TDLGGANIASCYWPPNHAVLADDYVCLFNQLGENFLIGGDWNAKHR 143
Query: 356 RWNSHTTTPNGRRL-DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHS 180
W + P G L + L+D ++++ PTH+P N ++RP +LD + ++ +
Sbjct: 144 LWGNMRRCPRGSILANILMDSNKYNVLTTAEPTHFPSN-SNRPSVLDFGIYAGISSHRLA 202
Query: 179 IEVVSELDSDHRPVVMKL 126
I V+EL SDH P++++L
Sbjct: 203 ISRVTELHSDHLPLLVQL 220
>UniRef50_P21328 Cluster: RNA-directed DNA polymerase from mobile
element jockey; n=4; Drosophiliti|Rep: RNA-directed DNA
polymerase from mobile element jockey - Drosophila
melanogaster (Fruit fly)
Length = 916
Score = 72.9 bits (171), Expect = 5e-12
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 2/151 (1%)
Frame = -1
Query: 548 PLDPPALANIEASVCRISL-TGHAPIVIASVYLPPDKIVLSSDIEALLG-MGSSVILAGD 375
PL P ++ + + R+ L T + +A+VYLPP + + D +++ +G+ I GD
Sbjct: 81 PLTP--ISTNDRQIARVHLQTSVGTVTVAAVYLPPAERWIVDDFKSMFAALGNKFIAGGD 138
Query: 374 LNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVT 195
N KH W + + P G+ L ++ + ++A PT Y N P LD +
Sbjct: 139 YNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPTFYSYNPLLTPSALDFFITCGYG 198
Query: 194 LRLHSIEVVSELDSDHRPVVMKLGRAPDSVP 102
+ ++ + EL SDH P++ L P P
Sbjct: 199 MGRLDVQTLQELSSDHLPILAVLHATPLKKP 229
>UniRef50_Q9NBX4 Cluster: Probable RNA-directed DNA polymerase from
transposon X-element; n=1; Drosophila melanogaster|Rep:
Probable RNA-directed DNA polymerase from transposon
X-element - Drosophila melanogaster (Fruit fly)
Length = 908
Score = 72.5 bits (170), Expect = 6e-12
Identities = 54/171 (31%), Positives = 77/171 (45%), Gaps = 2/171 (1%)
Frame = -1
Query: 578 IYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEALLG-M 402
I + +L PL P A A ++ + I T PI +VY PP + + + +L
Sbjct: 70 ILIKNSLAHFPLTPIATAKVQLAPAVIE-TALGPISFGAVYCPPRFAWTTDEFKDILEEF 128
Query: 401 GSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDIL 222
+ I+AGD N H W + + G L LV + D +A PT YP P +
Sbjct: 129 QTKFIVAGDWNASHWLWGAGRSNQRGIALANLVLNSEVDSLATGGPTRYPYGCRGSPGYI 188
Query: 221 DIALLKNVTLRLHS-IEVVSELDSDHRPVVMKLGRAPDSVPVTRTVVDCHT 72
D AL K V L +H+ I V EL SDH P+V+ L S P ++ T
Sbjct: 189 DFALTKGV-LGIHANISAVVELSSDHLPLVITLDAGAISYPKMERLITRRT 238
>UniRef50_Q95SX7 Cluster: Probable RNA-directed DNA polymerase from
transposon BS; n=7; melanogaster subgroup|Rep: Probable
RNA-directed DNA polymerase from transposon BS -
Drosophila melanogaster (Fruit fly)
Length = 906
Score = 66.5 bits (155), Expect = 4e-10
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 1/170 (0%)
Frame = -1
Query: 578 IYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPD-KIVLSSDIEALLGM 402
++ R L P +I+ S +++ TG + +++Y P +I + +
Sbjct: 71 VFVRTTLRHFPQRVIETRHIQLSSVKVA-TGLGDLQFSAIYCSPSTRIEERHFTDIIRAC 129
Query: 401 GSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDIL 222
G ++ GD N +H W +P GR L + I+A +PT YP +H P +
Sbjct: 130 GQRYLVGGDWNARHWLWGDTCNSPRGRELAEALSVTGAKILATGSPTRYPYVPSHTPSCI 189
Query: 221 DIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPDSVPVTRTVVDCHT 72
D A+ + L +I +LDSDH P+++ + V + +V HT
Sbjct: 190 DFAVYHGIPDHLATITQSWDLDSDHLPLIISIETDSTHVNPSPRLVTKHT 239
>UniRef50_Q18LA9 Cluster: Pol protein; n=8; melanogaster
subgroup|Rep: Pol protein - Drosophila melanogaster
(Fruit fly)
Length = 1103
Score = 65.3 bits (152), Expect = 1e-09
Identities = 46/138 (33%), Positives = 63/138 (45%), Gaps = 3/138 (2%)
Frame = -1
Query: 530 LANIEASVCRISLTGHAPIVIASVY--LPPDKIVLSSDIEALLGMGSSVILAGDLNCKHI 357
+A I +S R +T API VY L + E LL S IL GD NCKH
Sbjct: 104 IALIPSSRIRADMTIVAPIYCPPVYKWTTEQFSKLFNHFEMLLDGKSKFILGGDWNCKHR 163
Query: 356 RWNSHTTTPNGRRLD-ALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHS 180
W ++ + GR L +++ DIVA TH+P + +P LD A+ K +
Sbjct: 164 LWGNYLSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDFAICKGFHTQKLK 223
Query: 179 IEVVSELDSDHRPVVMKL 126
EL SDH P+ + L
Sbjct: 224 TYSTDELSSDHLPIQIVL 241
>UniRef50_Q6J4U7 Cluster: Pol protein; n=9; cellular organisms|Rep:
Pol protein - Drosophila melanogaster (Fruit fly)
Length = 1092
Score = 60.1 bits (139), Expect = 4e-08
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Frame = -1
Query: 476 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRR 318
IVIASVY PP +D+ E +G + +IL GD N KH +W G
Sbjct: 125 IVIASVYCPPSLSWSPHHFTDVLNFAEKTMGGQTKLILCGDWNAKHRQWGCIRACQRGAA 184
Query: 317 L-DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRP 141
L DA+ D +IVA + TH+P + P +D ++ K + I + L SDH P
Sbjct: 185 LYDAIQADSMAEIVATGSATHFPHDTRKSPSAIDFSICKRLGRYEKRISSSAHLSSDHLP 244
Query: 140 VVMKL 126
+++++
Sbjct: 245 ILLEI 249
>UniRef50_Q9GP60 Cluster: Pol protein; n=1; Drosophila
melanogaster|Rep: Pol protein - Drosophila melanogaster
(Fruit fly)
Length = 1227
Score = 59.3 bits (137), Expect = 6e-08
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 7/160 (4%)
Frame = -1
Query: 539 PPALANIEASV-CR-ISLTGHAPIVIASVYLPPDKIVLSSDI-EALLGMGSSVILAGDLN 369
P NI +S+ C + L I I + Y+PP +I SSDI E L + S IL GDLN
Sbjct: 78 PHTYRNINSSILCSALQLNFEQVINIVNAYIPPSQIFSSSDISEILQNLNGSTILLGDLN 137
Query: 368 CKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLR 189
W S T G++++ ++ + + ++ +PTH L+ + +DI+L+
Sbjct: 138 SWSPLWGSPRTNTRGKKIETVILENSLIVLNDGSPTH--LSTHNTFTHIDISLISPQIAH 195
Query: 188 LHSIEVVSEL-DSDHRPVVMKLG---RAPDSVPVTRTVVD 81
+ S + L SDH P+ + + R +++P+ + D
Sbjct: 196 MCSWSISDNLHGSDHFPITIHINTPTRPDNTLPLPKYKTD 235
>UniRef50_Q8I7P8 Cluster: ORF1; n=2; Drosophila melanogaster|Rep:
ORF1 - Drosophila melanogaster (Fruit fly)
Length = 884
Score = 58.8 bits (136), Expect = 9e-08
Identities = 34/105 (32%), Positives = 53/105 (50%)
Frame = -1
Query: 443 KIVLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTP 264
K + SD+ + + + ++ GD N +H W G+ L+ L D F I+ P P
Sbjct: 139 KSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQP 198
Query: 263 THYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMK 129
T+ P N + LD+ L N+ +L + V+ EL SDH PVV+K
Sbjct: 199 TYIPHNHKAKASTLDLC-LTNIPNQLANPAVMQELSSDHLPVVIK 242
>UniRef50_Q86GH0 Cluster: Pol protein; n=1; Drosophila
americana|Rep: Pol protein - Drosophila americana (Fruit
fly)
Length = 1517
Score = 57.6 bits (133), Expect = 2e-07
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 6/157 (3%)
Frame = -1
Query: 578 IYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEALLGMG 399
I R + + L+P + + I+L+ I++A +Y PP S + LL
Sbjct: 142 ILIRHGIKHIALEPIMQDACQCAPVAITLSTQETILVAPIYCPPQYKWTSENFGKLLSHI 201
Query: 398 SSV-----ILAGDLNCKHIRWNSHTTTPNGRRLDALV-DDLAFDIVAPLTPTHYPLNIAH 237
S+ I+ GD N K W + GR L + + ++I+A THYP +
Sbjct: 202 DSLSPQGFIICGDWNAKSTWWGNMRHCQRGRELLRTIHSNKKYNILATGGTTHYPYARGN 261
Query: 236 RPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 126
+P +D A+ + R +++L+SDH P+++ L
Sbjct: 262 QPSAIDFAIYGGIGDRRLRTYSINDLNSDHLPILIDL 298
>UniRef50_Q07995 Cluster: Reverse transcriptase homolog protein;
n=80; Culicimorpha|Rep: Reverse transcriptase homolog
protein - Chironomus thummi
Length = 883
Score = 47.6 bits (108), Expect = 2e-04
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 7/122 (5%)
Frame = -1
Query: 470 IASVYLPPDK------IVLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDA 309
I SVYLP + L DI + + + + GD N KH WN + +G L
Sbjct: 109 ILSVYLPRGSKGGEIDLHLRDDINKITNLRGNYYICGDFNAKHREWNCNVANKSGNILQE 168
Query: 308 LVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEV-VSELDSDHRPVVM 132
+ + F I P +PT+YP + +D+ +L N L + E+ +E SDH V
Sbjct: 169 MSGE--FVIYFPDSPTYYPEDRNKSVSTIDL-MLSNSNSNLETTELQCTEAMSDHCAVYF 225
Query: 131 KL 126
++
Sbjct: 226 QI 227
>UniRef50_Q24363 Cluster: Putative ORF2; n=2; melanogaster
subgroup|Rep: Putative ORF2 - Drosophila melanogaster
(Fruit fly)
Length = 1219
Score = 44.8 bits (101), Expect = 0.001
Identities = 28/134 (20%), Positives = 60/134 (44%), Gaps = 2/134 (1%)
Frame = -1
Query: 521 IEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEALLGMGSSV-ILAGDLNCKHIRWNS 345
I+ I++ + I S Y+ P K + + + + + ++ GD N H W S
Sbjct: 82 IDIEAIAINIESKLKLNIFSTYISPTKNITNQTLHNTFNIQQTPSLITGDFNGWHHPWGS 141
Query: 344 HTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVS 165
TT G+ +D++ ++ +PTH+ + + +D+ L + ++++
Sbjct: 142 PTTNKRGKITHRFIDNMHLILLNDKSPTHFSTHNTYTH--IDLTLCSPILAPHAKWKILN 199
Query: 164 EL-DSDHRPVVMKL 126
+L SDH P++ L
Sbjct: 200 DLHGSDHFPIITTL 213
>UniRef50_Q9U4W1 Cluster: Pol-like protein; n=1; Aedes aegypti|Rep:
Pol-like protein - Aedes aegypti (Yellowfever mosquito)
Length = 1208
Score = 43.2 bits (97), Expect = 0.005
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 7/164 (4%)
Frame = -1
Query: 578 IYYRRALHCVPLDP--PALANIEASVCRISLTGHAPIVIASVYLPPDKI--VLSSDIEAL 411
IY+ A+ +P P P N + + + L P+ + S YLP I + AL
Sbjct: 67 IYHSAAIGVLPTVPFSPLPLNTDLPIVAVKLEYPFPMTVISGYLPNGNIPDLKLRLFNAL 126
Query: 410 LGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLA--FDIVAPLTPTHYPLNIAH 237
+ S +++ D+N H W S +PN R +L+ D+A D+V L
Sbjct: 127 QSLSSPILVMWDVNGHHPEWGS--VSPNDR--GSLIMDVAEKLDLVI-LNDGATTFTRGQ 181
Query: 236 RPDILDIALLK-NVTLRLHSIEVVSELDSDHRPVVMKLGRAPDS 108
R +D++L ++ RL + SDH P+ + + P +
Sbjct: 182 RNSAIDVSLCSPSIVNRLLWTAKEDPMGSDHHPIFIHIDEQPQA 225
>UniRef50_A3FMR3 Cluster: Pol-like protein; n=2; Biomphalaria
glabrata|Rep: Pol-like protein - Biomphalaria glabrata
(Bloodfluke planorb)
Length = 1222
Score = 43.2 bits (97), Expect = 0.005
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = -1
Query: 521 IEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEALLG-MGSSVILAGDLNCKHIRWNS 345
++A RI+L H I S+YLPP + +D+E LL + ++ GD N + W S
Sbjct: 84 LQAVAARITL--HKVITCCSLYLPPGAPLNRTDMEDLLKQLPRPYLILGDFNAHNTMWGS 141
Query: 344 HTTTPNGRRLDALVDDLAFDIVAPLTPTH 258
+ T GR L+ + I+ +PT+
Sbjct: 142 NNTDTRGRMLEDIFLQHDLCILNDASPTY 170
>UniRef50_Q9C4A8 Cluster: Pol-like protein Pol-1; n=3; Tricholoma
matsutake|Rep: Pol-like protein Pol-1 - Tricholoma
matsutake (Matsutake mushroom) (Tricholoma nauseosum)
Length = 445
Score = 42.3 bits (95), Expect = 0.008
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 7/139 (5%)
Frame = -1
Query: 488 GHAPIVIASVYLPPDKIVLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDA 309
G I++A+VY ++ E+++ + + GD N +H W+ + D
Sbjct: 120 GEDVILLANVYSDSQHSAITLLFESVMTIPRLHFMCGDFNVRHASWDPQ-GPEHSIHADH 178
Query: 308 LVDD---LAFDIVAPLT--PTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSEL--DSD 150
LV+ L P+ PTH+P P ++D+ + + E+V E SD
Sbjct: 179 LVETATALGLTRALPVVEGPTHFPPQQGLHPTVIDLMFVPTDLRFVLYCEIVPEARGTSD 238
Query: 149 HRPVVMKLGRAPDSVPVTR 93
H P+ + L VPVT+
Sbjct: 239 HAPLTLVLPGPGSLVPVTK 257
>UniRef50_Q868S2 Cluster: Reverse transcriptase; n=4; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1201
Score = 39.9 bits (89), Expect = 0.042
Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 8/135 (5%)
Frame = -1
Query: 482 APIVIASVYLPPDKIVLSSDIEALLGM-------GSSVILAGDLNCKHIRWNSHTTTPNG 324
A I SVY PP + + + E LLG S V++AGD N H W S G
Sbjct: 146 AGITFISVYAPPS--LSAHEFERLLGAIELEAASHSRVVVAGDFNAWHEEWGSGRNGQRG 203
Query: 323 RRLDALVDDLAFDIV-APLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDH 147
L V+ L I+ PT A ++D++ +R + V+ SDH
Sbjct: 204 IELLQTVETLGLSILNQGRKPTFIGRGFA-ASSVIDVSFASREIVRPDTWSVIPFSRSDH 262
Query: 146 RPVVMKLGRAPDSVP 102
+ ++ + PD P
Sbjct: 263 ELIAFEV-KQPDENP 276
>UniRef50_Q4EC82 Cluster: Pol protein; n=2; Wolbachia endosymbiont
of Drosophila ananassae|Rep: Pol protein - Wolbachia
endosymbiont of Drosophila ananassae
Length = 463
Score = 39.5 bits (88), Expect = 0.056
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = -1
Query: 353 WNSHTTTPNGRRL-DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSI 177
W + + G+ L +A+ ++I+A T YP N P +D A+ SI
Sbjct: 2 WGNARSCNRGKLLAEAVQAKNRYNILATGEATCYPFNKKANPSAIDFAVYSGFLPTHISI 61
Query: 176 EVVSELDSDHRPVVMK--LGRAP 114
VSEL SDH P+++ LG+ P
Sbjct: 62 SSVSELSSDHVPLIINAALGKTP 84
>UniRef50_Q9TYX8 Cluster: Putative uncharacterized protein R11E3.3;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein R11E3.3 - Caenorhabditis elegans
Length = 931
Score = 38.3 bits (85), Expect = 0.13
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 8/126 (6%)
Frame = -1
Query: 470 IASVYLPP-----DKIVLSSDIEALLGMGSSVILAGDLNCKHIRWNSH-TTTPNGRRLDA 309
I++VY+PP + L +D + S I++GD+N H W+S + GR L
Sbjct: 3 ISNVYVPPRSSSSNHARLMTDFSNIFQTKSKSIISGDVNAHHSAWHSEGSEDTRGRELAE 62
Query: 308 LVDDLAFDIVAPLTPTHYPLNI--AHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVV 135
L+ DL D++ H + PDI ++ + H + +L SDH P+
Sbjct: 63 LI-DLHPDLIIQNEQVHTRADTYSISSPDI--TICTADLATKCH-WSTLYKLGSDHIPMK 118
Query: 134 MKLGRA 117
+K+ +A
Sbjct: 119 LKINQA 124
>UniRef50_Q8WPT4 Cluster: H25N7.03 protein; n=4; Trypanosoma
brucei|Rep: H25N7.03 protein - Trypanosoma brucei
Length = 1657
Score = 38.3 bits (85), Expect = 0.13
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 2/133 (1%)
Frame = -1
Query: 530 LANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEALLGMGSSVILAGDLNCKHIRW 351
+ IE I L + + S Y+PP ++D++ LL + ++ D N + W
Sbjct: 168 IGRIEQVHATIHLARGTALTVTSAYIPPKHTFTATDLDTLLTTDGAQLIGADANAHALAW 227
Query: 350 NSHTTTPN--GRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSI 177
+ + PN G L D F + T Y + H D+ L +N T +++
Sbjct: 228 D-RASPPNTKGETLTQWCIDNQFLVCNTGECTRYARH--HGESTPDVTLSRNCT--VYTW 282
Query: 176 EVVSELDSDHRPV 138
+ DSDH +
Sbjct: 283 TSLYSPDSDHHHI 295
>UniRef50_Q868Q6 Cluster: Reverse transcriptase; n=3; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1248
Score = 38.3 bits (85), Expect = 0.13
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = -1
Query: 422 IEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNI 243
I+ L+ V+LAGD N H W S T P G L LV+ L +++ T +
Sbjct: 106 IDILIRGHPRVLLAGDFNAWHTAWGSERTKPKGIALLQLVNGLGLEVLNIGTSHTFRGCG 165
Query: 242 AHRPDILDIA 213
+ RP +D+A
Sbjct: 166 SARPSRIDVA 175
>UniRef50_Q9Y026 Cluster: NL1Tc; n=2; Trypanosoma cruzi|Rep: NL1Tc -
Trypanosoma cruzi
Length = 327
Score = 37.1 bits (82), Expect = 0.30
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Frame = -1
Query: 551 VPLDPPAL-ANIEASVCRISLTGHAPIVIASVYL-PPDKIVLS-SDIEALLGMGSSVILA 381
+PL P ++E V +++L + +++AS Y+ PP ++ S + L S ++L
Sbjct: 126 IPLTIPQHDTSLEVVVVQVALDQNRDLIVASAYMRPPPQVTQSFRRLVNCLPASSPLLLC 185
Query: 380 GDLNCKHIRWNSH-TTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIA---HRPDILDIA 213
GD N H +W T+P+ + L +L D L T + A +D+
Sbjct: 186 GDFNMHHPQWEPFLETSPSEVAAEFL--ELCTDAGLTLVNTPGEITYARGTRERSCIDLT 243
Query: 212 LLKNVTLRLHSIEVVSELDSDHRPVVMKLGRA-PDSVP 102
K++T+ S VS L SDH + L +A D++P
Sbjct: 244 WSKHLTVSDWSAS-VSPL-SDHYVLTFTLHQAFKDTIP 279
>UniRef50_UPI0000E47200 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 597
Score = 36.7 bits (81), Expect = 0.39
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 6/104 (5%)
Frame = -1
Query: 503 RISLTGHAPIVIASVYLPP-----DKIVLSSDIEALLGMG-SSVILAGDLNCKHIRWNSH 342
R+ L +++A+ Y P D L +I +++ ++IL GD N I+W +
Sbjct: 13 RVKLNNQPDLIVAAFYRSPSSGPSDLHNLHLNINSIMRSRLPNIILTGDFNLPSIQWEEN 72
Query: 341 TTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIAL 210
T + + +L DI+ L T L +ILD+ L
Sbjct: 73 VTIDANPQYGLHIKELMLDIIDQLGLTQMVLQPTRMGNILDLVL 116
>UniRef50_UPI0000D57951 Cluster: PREDICTED: similar to RNA-directed
DNA polymerase from mobile element jockey (Reverse
transcriptase); n=2; Tribolium castaneum|Rep: PREDICTED:
similar to RNA-directed DNA polymerase from mobile
element jockey (Reverse transcriptase) - Tribolium
castaneum
Length = 971
Score = 36.3 bits (80), Expect = 0.52
Identities = 30/133 (22%), Positives = 55/133 (41%), Gaps = 2/133 (1%)
Frame = -1
Query: 476 IVIASVYLPPDKIVLSSDIEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDD 297
I+ Y + LS+++ I+ GD N +H + T NG L + +
Sbjct: 105 IITFFTYYNSPRQCLSNELMQYAASLPKAIILGDFNARHTDFGDTLTNRNGHILIDAISN 164
Query: 296 LAFDIVAPLTPTHYPLNIAHRPDILD-IALLKNVTLRL-HSIEVVSELDSDHRPVVMKLG 123
L + +PTH +N I+D I + +++ R S + + + SDH P+V L
Sbjct: 165 LPLYRIPNSSPTH--INHWEGYSIVDHILVTDSLSNRASDSANIGTTITSDHLPLVFDLS 222
Query: 122 RAPDSVPVTRTVV 84
+ P ++
Sbjct: 223 VSKPRTPTPEYII 235
>UniRef50_UPI0000E4721F Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 647
Score = 35.9 bits (79), Expect = 0.69
Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 7/133 (5%)
Frame = -1
Query: 503 RISLTGHAPIVIASVYLPP-DKIVLSSDIEALLGM------GSSVILAGDLNCKHIRWNS 345
++ L G ++I + Y P D S++E LG G +++LAGD N +I W +
Sbjct: 88 QLELKGRHSLLIGTAYKPRHDDKNFVSELENSLGKISRKGRGYNILLAGDFNQPNIDWVN 147
Query: 344 HTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVS 165
T N + L V + Y R +ILD+ N +L + I V
Sbjct: 148 STVVSNHSASKDTAESL-LQTVTGFGLSQYVRQPTRRDNILDLVFTNNDSL-VRDIRVKH 205
Query: 164 ELDSDHRPVVMKL 126
+ SDH V+ L
Sbjct: 206 GI-SDHYIVITDL 217
>UniRef50_A3TKA7 Cluster: Putative uncharacterized protein; n=1;
Janibacter sp. HTCC2649|Rep: Putative uncharacterized
protein - Janibacter sp. HTCC2649
Length = 225
Score = 35.1 bits (77), Expect = 1.2
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = -1
Query: 512 SVCRISLTGHAPIVIASVYLPPDKIVLSSDIEALL---GMGSSVILAGDLN 369
+V R++ G P+ +ASV+L D ++ + +L +G VILAGDLN
Sbjct: 99 AVARVAAPGCEPVAVASVHLSLDAHERAAHAQVILQTINVGGEVILAGDLN 149
>UniRef50_A6R5U3 Cluster: Predicted protein; n=10; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1390
Score = 35.1 bits (77), Expect = 1.2
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 14/134 (10%)
Frame = -1
Query: 473 VIASVYLPPDKIVLSS-------DIEALLGMGSS--VILAGDLNCKHIRWNSHTTTPNGR 321
V+ +VY PP S ++ + GMG+ +++ GDLN H RW N R
Sbjct: 385 VMVNVYAPPPGGYSSEPEESPIGQLQEVAGMGTDAELVILGDLNVHHERWGGVRVERNFR 444
Query: 320 ---RLDALVDDLAFDIVAPLTPTHYP--LNIAHRPDILDIALLKNVTLRLHSIEVVSELD 156
+L A VD L + P+ T + + D+ ++ L + LR +I +
Sbjct: 445 MAWQLIAQVDRLGLQLATPVGATTWQDRGSPGTTIDLTFLSPLLHDKLRRCAIAEEACKG 504
Query: 155 SDHRPVVMKLGRAP 114
SDH+P+ L P
Sbjct: 505 SDHKPIETTLELTP 518
>UniRef50_UPI00015B43B0 Cluster: PREDICTED: similar to reverse
transcriptase homolog, partial; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to reverse
transcriptase homolog, partial - Nasonia vitripennis
Length = 1316
Score = 34.7 bits (76), Expect = 1.6
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 10/141 (7%)
Frame = -1
Query: 524 NIEASVCRISLTGHAPIVIASVYLPP-------DKIVLSSDIEALLGMGSSVILAGDLNC 366
N+E++ +I T + ++I SVY D++ + + +LAGD+N
Sbjct: 375 NLESTAIKIQCTDNTQLMIISVYAAGHNQHGFIDELNHLFTQNNIQTNNTYFLLAGDINA 434
Query: 365 KHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLK---NVT 195
+ W T G L ++ + D+ + P P N LD+ + N+
Sbjct: 435 RVRHWGDSITKSRGGYLTNWLNSNSIDLRLNIYPPAEP-NFPSSNSYLDVCIADARINIV 493
Query: 194 LRLHSIEVVSELDSDHRPVVM 132
++ V + DSDHR + M
Sbjct: 494 NSANTKCQVLDYDSDHRAIYM 514
>UniRef50_UPI0000E487CB Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=7;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 1060
Score = 34.7 bits (76), Expect = 1.6
Identities = 42/168 (25%), Positives = 66/168 (39%), Gaps = 12/168 (7%)
Frame = -1
Query: 527 ANIEASVCRISLTGHAPIVIASVYLPPDKIV---------LSSDIEALLGMGSSVILAGD 375
++ E C + L P+ I S Y PP+ LS + ++++AGD
Sbjct: 242 SDCEIQWCNVQLANAKPLYIGSYYCPPNNRQQGLEGLHQSLSKIMTRHRRSHPNILIAGD 301
Query: 374 LNCKHIRWNSHTTTPNGRRL--DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKN 201
N I W+ +TT L+D L + L+ T + +ILD+ + N
Sbjct: 302 FNHPDINWDDQSTTNPATSTCHQKLLDILLHN---SLSQTVREVTRPSSNNILDLVVTSN 358
Query: 200 VTLRLHSIEVVSELDSDHRPVVMKLGRAPD-SVPVTRTVVDCHTPGHQ 60
L + ++ V S + SDH V L P SV R + H Q
Sbjct: 359 PAL-VENVCVKSGI-SDHNIVTFTLAANPKISVKPLRKIYQFHKADEQ 404
>UniRef50_Q868R0 Cluster: Reverse transcriptase; n=1; Anopheles
gambiae|Rep: Reverse transcriptase - Anopheles gambiae
(African malaria mosquito)
Length = 1173
Score = 34.7 bits (76), Expect = 1.6
Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 2/123 (1%)
Frame = -1
Query: 422 IEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIV-APLTPTHYPLN 246
+E + +V+L GD N H W S T G L V+ L ++ T T
Sbjct: 106 VEIEVSAHPNVVLGGDFNAWHEAWGSARTKRKGEELLNTVEQLGLIVLNRGNTSTFTGRG 165
Query: 245 IAHRPDILDIALLKNVTLRLHSIEVV-SELDSDHRPVVMKLGRAPDSVPVTRTVVDCHTP 69
IA ++D+ +R ++ EV+ S SDHR V + DS V + H
Sbjct: 166 IAGE-SVIDVTFASPSIVRYNTWEVLKSYWYSDHRYVRFSV----DSSSVLGNGIQLHRH 220
Query: 68 GHQ 60
HQ
Sbjct: 221 QHQ 223
>UniRef50_UPI0000E49F41 Cluster: PREDICTED: similar to
endonuclease/reverse transcriptase; n=3;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease/reverse transcriptase - Strongylocentrotus
purpuratus
Length = 835
Score = 34.3 bits (75), Expect = 2.1
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = -1
Query: 524 NIEASVCRISLTGHAP--IVIASVYLPPDKIVLSSDIEALLGMGSSVILAGDLNCKHIRW 351
+IE+ C+ SL+ A ++ + Y PP+ S IE L G +IL GD N + W
Sbjct: 99 DIESVWCQASLSNQADDTVLFGTYYRPPND--RSKTIENL-GDSPHIILGGDFNVPGLDW 155
Query: 350 NSHTTTPNGRRLDALVD 300
+ P D L++
Sbjct: 156 SEDPVEPKNALHDTLIN 172
>UniRef50_Q5B7Y7 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 960
Score = 34.3 bits (75), Expect = 2.1
Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 14/119 (11%)
Frame = -1
Query: 566 RALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIV-------LSSDIEALL 408
R L V D PA + E + I+ A + I +VY PP+ +V S + LL
Sbjct: 211 RTLTYVQRDLPAHSLPEPILPDITTIYTAGLTIINVYCPPNNLVAPAGAGSTPSILSTLL 270
Query: 407 GMG--SSVILAGDLNCKHIRW----NSHTTTPNGRRLDALVDDLAFDI-VAPLTPTHYP 252
G + ILAGD N +H W S+ P L +D ++ + P TPT P
Sbjct: 271 GYAPPENTILAGDFNTQHPFWQPDTESYAVIPGATGLLDWLDAHELELRLEPGTPTRGP 329
>UniRef50_A6RFJ6 Cluster: Predicted protein; n=6; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1163
Score = 34.3 bits (75), Expect = 2.1
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 14/134 (10%)
Frame = -1
Query: 473 VIASVYLPPDKIVLSS-------DIEALLGMGSS--VILAGDLNCKHIRWNSHTTTPNGR 321
V+ +VY PP S ++ + GMG+ +++ GDLN H RW N R
Sbjct: 385 VMVNVYAPPPGGYSSEPEESPIGQLQEVAGMGTDAELVILGDLNVHHERWGGVRVERNFR 444
Query: 320 ---RLDALVDDLAFDIVAPLTPTHYP--LNIAHRPDILDIALLKNVTLRLHSIEVVSELD 156
+L A VD L + P+ T + + D+ ++ L + LR +I +
Sbjct: 445 MAWQLIAQVDRLGLQLATPVGATTWQDRGSPGTTIDLTFLSPLLHDKLRRCAIAEEACKG 504
Query: 155 SDHRPVVMKLGRAP 114
SDH+P+ L P
Sbjct: 505 SDHKPMETTLELTP 518
>UniRef50_A6R9N6 Cluster: Predicted protein; n=24; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1553
Score = 34.3 bits (75), Expect = 2.1
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 14/134 (10%)
Frame = -1
Query: 473 VIASVYLPPDKIVLSS-------DIEALLGMGSS--VILAGDLNCKHIRWNSHTTTPNGR 321
V+ +VY PP S ++ + GMG+ +++ GDLN H RW N R
Sbjct: 686 VMVNVYAPPPGGYSSEPEESPIGQLQEVAGMGTDAELVILGDLNVHHERWGGVRVERNFR 745
Query: 320 ---RLDALVDDLAFDIVAPLTPTHYP--LNIAHRPDILDIALLKNVTLRLHSIEVVSELD 156
+L A VD L + P+ T + + D+ ++ L + LR +I +
Sbjct: 746 MAWQLIAQVDRLGLQLATPVGATTWQDRGSPGTTIDLTFLSPLLHDKLRRCAIAEEACKG 805
Query: 155 SDHRPVVMKLGRAP 114
SDH+P+ L P
Sbjct: 806 SDHKPMETTLELTP 819
>UniRef50_A7DJG3 Cluster: Endonuclease/exonuclease/phosphatase; n=2;
Methylobacterium extorquens PA1|Rep:
Endonuclease/exonuclease/phosphatase - Methylobacterium
extorquens PA1
Length = 259
Score = 33.9 bits (74), Expect = 2.8
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = -1
Query: 290 FDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLGRAPD 111
F V P PTH +++ P LD L++ + H V+ SDH P+V+ L AP+
Sbjct: 161 FRDVGPRRPTHAMVDVL--PLRLDRCLVRGLVC--HERMVLPRGLSDHHPIVVHLSPAPE 216
Query: 110 SVP 102
VP
Sbjct: 217 GVP 219
>UniRef50_Q868Q4 Cluster: Reverse transcriptase; n=3; Bombyx
mori|Rep: Reverse transcriptase - Bombyx mori (Silk
moth)
Length = 1076
Score = 33.5 bits (73), Expect = 3.7
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -1
Query: 395 SVILAGDLNCKHIRWNSHTTTPNGRRLD 312
SVILAGD N K + W S T GR L+
Sbjct: 121 SVILAGDFNAKSVAWGSPFTDARGRLLE 148
>UniRef50_UPI0000D57919 Cluster: PREDICTED: hypothetical protein,
partial; n=2; Tribolium castaneum|Rep: PREDICTED:
hypothetical protein, partial - Tribolium castaneum
Length = 263
Score = 33.1 bits (72), Expect = 4.9
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 1/136 (0%)
Frame = -1
Query: 539 PPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEALLGMGSSVILAGDLNCKH 360
PP L +++A I + + I+ Y PP + V + ++ +VIL GD N +H
Sbjct: 81 PPHLDHLQAVAATIHIN-NLNILFICYYNPPLETVSTQLLDYTSTFRHAVIL-GDFNARH 138
Query: 359 IRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHS 180
+ + NGR L ++ L + PT +N + I + N+T ++
Sbjct: 139 TDFGDTISNTNGRHLTRSLNTLPLCRLRNQFPT--LINHVGTSIVDHIIVTDNLTHITNT 196
Query: 179 IEVV-SELDSDHRPVV 135
+ + + SDH P+V
Sbjct: 197 DSFIGTTVTSDHLPLV 212
>UniRef50_A1R6N4 Cluster: Putative glycosyl transferase, group 1
family domain protein; n=1; Arthrobacter aurescens
TC1|Rep: Putative glycosyl transferase, group 1 family
domain protein - Arthrobacter aurescens (strain TC1)
Length = 417
Score = 33.1 bits (72), Expect = 4.9
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = -1
Query: 569 RRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDIEALLGMGSSV 390
R A+ V D P L + +S ++L H +VI L PD ++ + +LGMGSS
Sbjct: 227 RPAMLLVAGDGPGLREVRSSASAVNLR-HGRVVIRVEGLVPDPRMIYDAADVVLGMGSSA 285
Query: 389 I 387
+
Sbjct: 286 L 286
>UniRef50_A7Q5T8 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 208
Score = 33.1 bits (72), Expect = 4.9
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 326 GRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLK-NVTLRLHSIEVVSE 162
GR+ L D LA DI + T + PL I +ILD A+L N SIE V+E
Sbjct: 42 GRQSSQLADQLALDIFSWFTHSREPLYIDDLENILDEAMLSLNTMTEDGSIEEVAE 97
>UniRef50_A4B3A9 Cluster: Putative uncharacterized protein; n=1;
Alteromonas macleodii 'Deep ecotype'|Rep: Putative
uncharacterized protein - Alteromonas macleodii 'Deep
ecotype'
Length = 309
Score = 32.7 bits (71), Expect = 6.4
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = -1
Query: 488 GHAPIVIASVYLPPDKIVLSSDIEALLGMGSSVIL 384
G +V A LPPDKIVL S + ++G SSV+L
Sbjct: 235 GFGLMVAAGPKLPPDKIVLISTLTPIVGYVSSVLL 269
>UniRef50_Q4DQK2 Cluster: CYC2-like cyclin, putative; n=3;
Trypanosoma cruzi|Rep: CYC2-like cyclin, putative -
Trypanosoma cruzi
Length = 1041
Score = 32.7 bits (71), Expect = 6.4
Identities = 25/66 (37%), Positives = 31/66 (46%)
Frame = -1
Query: 407 GMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPD 228
G +S +G C + T + RRLD D AFD TP H PLN+ PD
Sbjct: 795 GACNSDTSSGKARCGMDVFQKSTGKNDARRLDFDTFD-AFD--EEQTPPHRPLNVLSPPD 851
Query: 227 ILDIAL 210
L+IAL
Sbjct: 852 QLNIAL 857
>UniRef50_A7SX46 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 437
Score = 32.7 bits (71), Expect = 6.4
Identities = 24/95 (25%), Positives = 43/95 (45%)
Frame = -1
Query: 410 LGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRP 231
L + +I+AGD+N I W S+ + + + V+ D+V + + +
Sbjct: 193 LAITKRIIIAGDMNVPDIEW-SNASVKDNPQYGVAVNKTMIDLVDDHSLSQLVTFPTRQE 251
Query: 230 DILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 126
+LD+ L + L +HS+ V + SDH V L
Sbjct: 252 SVLDLVLTSHPDL-VHSLSSVQGI-SDHSAVSFDL 284
>UniRef50_UPI0000E476C1 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase, partial; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase, partial -
Strongylocentrotus purpuratus
Length = 608
Score = 32.3 bits (70), Expect = 8.5
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Frame = -1
Query: 398 SSVILAGDLNCKHIRWNSHTTTPNGRR--LDALVDDLAFDIVAPLTPTHYPLNIAHRPDI 225
S +++A D N I W +HTT+ +DA+ D V T Y N P++
Sbjct: 134 SHLLIADDFNYASINWETHTTSKESEEAFIDAIEDCFLTQHVK--ESTRYREN--QTPNL 189
Query: 224 LDIALLKNVTLRLHSIEVVSEL-DSDHRPVVMKLGRAPD 111
LD+ LL N + +I+ + L +SDH ++ L PD
Sbjct: 190 LDL-LLTNRDNIISNIDFLPGLGNSDHVCLLFDLLVYPD 227
>UniRef50_Q604E4 Cluster: Endonuclease/exonuclease/phosphatase
family protein; n=1; Methylococcus capsulatus|Rep:
Endonuclease/exonuclease/phosphatase family protein -
Methylococcus capsulatus
Length = 282
Score = 32.3 bits (70), Expect = 8.5
Identities = 31/99 (31%), Positives = 48/99 (48%)
Frame = -1
Query: 422 IEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNI 243
I L+G V++ GDLNC+ PN LD L+D + T +P
Sbjct: 182 ISDLIGHLPYVVMMGDLNCE----------PNTPELDLLLDATHLNDPVCRLKT-FPSWR 230
Query: 242 AHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 126
H+ +LD +L +LR++ +EV+ SDH PV M++
Sbjct: 231 PHK--MLD-HILVTPSLRVNRLEVIDFACSDHLPVSMEV 266
>UniRef50_A0PTD7 Cluster: Putative uncharacterized protein; n=1;
Mycobacterium ulcerans Agy99|Rep: Putative
uncharacterized protein - Mycobacterium ulcerans (strain
Agy99)
Length = 421
Score = 32.3 bits (70), Expect = 8.5
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -1
Query: 365 KHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDIL 222
+H RW + + R+ ++D D+ A T YPLN+ H ++
Sbjct: 158 EHDRWTENRNSLRALRVREVLDGAQLDVDAMTTEIRYPLNLIHLATVM 205
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 560,166,913
Number of Sequences: 1657284
Number of extensions: 10792321
Number of successful extensions: 29422
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 28473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29384
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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