Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0466
         (578 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.2  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   2.9  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   3.8  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   3.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   3.8  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                22   5.0  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   8.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.8  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 106 TESGARPSFITTGRWSESNSETTSIE 183
           T++G  P+F+T   W E  + T S+E
Sbjct: 502 TQTGTGPAFLTIKEWIERGT-TKSME 526


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 93  DCGGLPHPWASAWLNLIHH 37
           + GGL HP A  W  +  H
Sbjct: 880 EIGGLQHPGAVVWFTVSLH 898


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +2

Query: 26 KRKRWWIR 49
          KRKRWW R
Sbjct: 41 KRKRWWSR 48


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -3

Query: 84  GLPHPWASAWLNLIHHRFRLVRTLV 10
           GLP P    W N   ++++ +R ++
Sbjct: 304 GLPFPQRPIWSNFPIYKYKYIREIM 328


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -3

Query: 84  GLPHPWASAWLNLIHHRFRLVRTLV 10
           GLP P    W N   ++++ +R ++
Sbjct: 304 GLPFPQRPIWSNFPIYKYKYIREIM 328


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 249 KYRASPGYTRHSVIKKRNSALTLD 178
           K+  +PGYT   VIK+       D
Sbjct: 213 KFYGTPGYTAPEVIKQNRPTPAAD 236


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 231 GYTRHSVIKKRNSA 190
           GYT+  VI K NSA
Sbjct: 152 GYTKRDVIYKWNSA 165


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 515 ASVCRISLTGHAPIVIASVYLPP 447
           ASV   +LTG  P ++    LPP
Sbjct: 469 ASVVAAALTGTYPTLLPQWCLPP 491


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,835
Number of Sequences: 438
Number of extensions: 3485
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)