Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0465
         (595 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7P870 Cluster: Chromosome chr3 scaffold_8, whole genom...    28   0.36 
UniRef50_Q5ALJ9 Cluster: Putative uncharacterized protein; n=1; ...    29   1.4  
UniRef50_UPI0000499489 Cluster: hypothetical protein 139.t00019;...    33   5.0  
UniRef50_A5UT66 Cluster: Peptidase dimerisation domain protein; ...    33   5.0  
UniRef50_A1Z398 Cluster: NADH-ubiquinone oxidoreductase chain 5;...    33   5.0  
UniRef50_A1EUS5 Cluster: Transporter, POT family protein; n=4; C...    32   8.8  
UniRef50_Q7PPM7 Cluster: ENSANGP00000013048; n=1; Anopheles gamb...    32   8.8  

>UniRef50_A7P870 Cluster: Chromosome chr3 scaffold_8, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr3 scaffold_8, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 108

 Score = 28.3 bits (60), Expect(2) = 0.36
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 480 WHRWWRWWILCSFAFGYWRIICCLE 406
           W RWW W  L  F + +W+ +   E
Sbjct: 65  WRRWWEW--LIGFQYFWWKRLLVYE 87



 Score = 27.9 bits (59), Expect(2) = 0.36
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -2

Query: 492 TVCYWHRWWRWWI 454
           ++ YW+RWW W++
Sbjct: 39  SLVYWNRWWDWFL 51


>UniRef50_Q5ALJ9 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 105

 Score = 28.7 bits (61), Expect(2) = 1.4
 Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
 Frame = -2

Query: 480 WHR--WWRWWILCSFAFGYWRIICCL 409
           W R  WWRWW L S  +   +   CL
Sbjct: 54  WRRMWWWRWWQLISIFYQLHQYPVCL 79



 Score = 25.4 bits (53), Expect(2) = 1.4
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = -2

Query: 486 CYWHRW-WRWW 457
           C W  W WRWW
Sbjct: 38  CIWWGWVWRWW 48


>UniRef50_UPI0000499489 Cluster: hypothetical protein 139.t00019;
           n=2; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 139.t00019 - Entamoeba histolytica HM-1:IMSS
          Length = 519

 Score = 33.1 bits (72), Expect = 5.0
 Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
 Frame = +2

Query: 20  LCSVDRIAYRAFTPTRLMYECDF-----SRTGTIIANLGGLFNISQIYKVRNTNNC*VYC 184
           LC +  IA  +F   RL Y+C        +  T+  ++GG  + +        + C    
Sbjct: 119 LCILFCIARTSFELVRLFYDCQIPYIMDQKNRTLAQSVGGAVSFTGAILAIGVSFCCSLV 178

Query: 185 FRRYKNTRAKKLPSRKPYVFSRLTFMIISNVFLGG-VYKP 301
           +  Y N    ++   +P  F  L  +I+ N FLGG V+ P
Sbjct: 179 WGNYSNVNQLQITHAEP-DFGPLRQLILFNFFLGGYVFLP 217


>UniRef50_A5UT66 Cluster: Peptidase dimerisation domain protein;
           n=9; Bacteria|Rep: Peptidase dimerisation domain protein
           - Roseiflexus sp. RS-1
          Length = 475

 Score = 33.1 bits (72), Expect = 5.0
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +1

Query: 331 KPLVIIQCYEDRQPTLPLKKTDHLPFE-ATNDPPIPKREATED 456
           KP V+I  + D QP  PL+  DH PFE    D  +  R A++D
Sbjct: 77  KPTVLIYGHFDTQPADPLELWDHPPFEPVVRDGRVYARGASDD 119


>UniRef50_A1Z398 Cluster: NADH-ubiquinone oxidoreductase chain 5;
           n=3; Romanomermis|Rep: NADH-ubiquinone oxidoreductase
           chain 5 - Romanomermis nielseni
          Length = 493

 Score = 33.1 bits (72), Expect = 5.0
 Identities = 17/55 (30%), Positives = 33/55 (60%)
 Frame = -3

Query: 347 MMTKGFDLLILFIFNVAYKHHRGKRLKLS*RLIAKTHMAFVKVIFLLAYFYIFGN 183
           M++  F+ L L+ F+V   + + K LK+S  L  +  ++ + VIF+++  +IF N
Sbjct: 1   MLSLNFNTLNLYFFSVPLFYMKMKILKVSQFLNLEISLSLLNVIFMISLMFIFKN 55


>UniRef50_A1EUS5 Cluster: Transporter, POT family protein; n=4;
           Coxiella burnetii|Rep: Transporter, POT family protein -
           Coxiella burnetii 'MSU Goat Q177'
          Length = 491

 Score = 32.3 bits (70), Expect = 8.8
 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
 Frame = -3

Query: 347 MMTKGFDLLILFIFNVAYKHHRGKRLKLS*RLIAKTHMAFVKVIFLLA--YFYIFGNNTL 174
           +++ GF L+++ +F +A+KHH   R KL   +I      F  +I+ LA     IF  N +
Sbjct: 244 VLSVGF-LMLVVLFLIAFKHHDAARKKLFAFIILIVSAQFFWIIYQLAPMSLTIFAKNNV 302

Query: 173 N 171
           N
Sbjct: 303 N 303


>UniRef50_Q7PPM7 Cluster: ENSANGP00000013048; n=1; Anopheles gambiae
            str. PEST|Rep: ENSANGP00000013048 - Anopheles gambiae
            str. PEST
          Length = 1038

 Score = 32.3 bits (70), Expect = 8.8
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +3

Query: 270  QTFSSVVFISH-VKNEEN*QIETFGHHPVLRRQTTYFAAQENRSPSVR 410
            QT SS  F    +KNEEN  I T  HHP+L       AA +  S  ++
Sbjct: 954  QTMSSFEFSEKALKNEENADIYTENHHPILSHHPVPIAALQAPSKMIQ 1001


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,239,808
Number of Sequences: 1657284
Number of extensions: 10905623
Number of successful extensions: 26530
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26498
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)