Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0464
         (573 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   2.4  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    23   2.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   3.2  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   5.6  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   9.9  

>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 7/15 (46%), Positives = 14/15 (93%)
 Frame = +2

Query: 224 AATTESPASFATAEP 268
           +ATTE+PA+++++ P
Sbjct: 26  SATTEAPAAYSSSSP 40


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 7/15 (46%), Positives = 14/15 (93%)
 Frame = +2

Query: 224 AATTESPASFATAEP 268
           +ATTE+PA+++++ P
Sbjct: 26  SATTEAPAAYSSSSP 40


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 451 PYSTKLLNQYSSNNKLYKNTFKLFSNNRYRQ 543
           P    L+  Y  +NKL   T  LF N  + Q
Sbjct: 245 PVELSLMQLYLGHNKLLNATKDLFGNMPHLQ 275


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -1

Query: 147 DDSVEYRSLVDCFDRFLAF 91
           D +++YR++++  D  LAF
Sbjct: 109 DGNIKYRTILESVDHRLAF 127


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = +2

Query: 77  SQNQSNARKRSKQSTSERYSTESSVDPTTTAAGAKSNYSTATKS 208
           S+NQ       ++ ++   STE   D    A+  K N  +  KS
Sbjct: 32  SRNQQLRTGEKRKRSTSSQSTEGENDARPRASQVKLNVFSIIKS 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,416
Number of Sequences: 336
Number of extensions: 949
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)