Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0463
         (586 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0977 - 33239887-33240566,33241010-33241985                       28   6.3  
03_02_0263 - 6948618-6948818,6948909-6948971,6949078-6949146,694...    27   8.3  
01_05_0106 + 18160018-18160243,18160423-18160470,18160816-181609...    27   8.3  

>02_05_0977 - 33239887-33240566,33241010-33241985
          Length = 551

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -1

Query: 505 VASGLALHLVLLKSMGNGNHSPSGGPYACLPTWAIKKKKLL 383
           + + LALH   L + G+G+ SP+    A  P+W  K  + L
Sbjct: 179 IGTALALH-AKLNNGGSGSSSPAPPSRAAFPSWVTKHDRHL 218


>03_02_0263 -
           6948618-6948818,6948909-6948971,6949078-6949146,
           6949232-6949297,6949380-6949526,6949608-6949702,
           6949845-6950016,6952187-6952318,6953581-6953674,
           6954067-6954184,6955884-6957057
          Length = 776

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = +1

Query: 418 DKHTAHLMASGYRCPWTSAIPGAEPSRWLPLSTLSNHNVPCKYSNLAVVSCW 573
           D+    ++A  Y C      P  +P RWL +  L  H++ C+Y  + +   W
Sbjct: 405 DQRKDIVLADKYTCGNYMQKPVTQPGRWLII--LVYHSLLCQYITIGLSLLW 454


>01_05_0106 +
           18160018-18160243,18160423-18160470,18160816-18160974,
           18162056-18162219,18162778-18162885,18163695-18163865,
           18163945-18164478,18164574-18164648,18164724-18164852,
           18164975-18165049,18165129-18165338,18165529-18165681,
           18165763-18165986,18166305-18166422,18166518-18166656,
           18166745-18166946,18166981-18167149,18167190-18167267,
           18167268-18167408,18167717-18167819,18169024-18169324,
           18169450-18169518,18169602-18169626,18170946-18170975
          Length = 1216

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +1

Query: 430 AHLMASGYRCPWTSAIPGAEPSRWLPLSTLSNHNV 534
           AH++AS  RCP  S + GA  S    L      N+
Sbjct: 677 AHILASAQRCPPVSGVEGAIDSHLRVLGEQERWNI 711


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,599,993
Number of Sequences: 37544
Number of extensions: 275897
Number of successful extensions: 549
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)