Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0463
         (586 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z67990-6|CAA91937.1|  199|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z48006-4|CAA88048.1|  429|Caenorhabditis elegans Hypothetical pr...    28   4.2  
Z70207-8|CAM33501.1|  835|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z70207-5|CAA94127.2|  914|Caenorhabditis elegans Hypothetical pr...    27   7.4  
U64843-11|AAL08038.1|  365|Caenorhabditis elegans Hypothetical p...    27   7.4  
AF316542-1|AAG50270.1|  914|Caenorhabditis elegans serine/threon...    27   7.4  
U41007-21|AAK84502.1|  465|Caenorhabditis elegans Hypothetical p...    27   9.8  
U41007-20|AAA82275.1|  455|Caenorhabditis elegans Hypothetical p...    27   9.8  

>Z67990-6|CAA91937.1|  199|Caenorhabditis elegans Hypothetical
           protein F02D10.6 protein.
          Length = 199

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 15/58 (25%), Positives = 29/58 (50%)
 Frame = +1

Query: 46  VFFFFFLMNYIGGVFCVAYQYSNFCFVTKLNLLFICFNLKILF*LSTSLFVFIVTVYF 219
           ++ F  L+     VFC    ++   +     LL +C+N+ IL+ L   +  F +++YF
Sbjct: 49  IWMFHLLIALFLSVFCKTLNFA--IYRAGFRLLHMCYNVYILYTLGYMIVPFHISLYF 104


>Z48006-4|CAA88048.1|  429|Caenorhabditis elegans Hypothetical
           protein F19C6.3 protein.
          Length = 429

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = -3

Query: 287 LGICFSYINWSLYVLLRCILICQKYTVTIKTNNDVDS*NRIFKLKQINKRFNFVTKQKLL 108
           + +   +I+ S Y+L   + +       I TN D+DS    F  +   +R  F  K K L
Sbjct: 13  ISVSHGHIDRSSYILAHYMNLLSIGESWILTNFDLDSNGTFFLAQNSERRIEFGFKNKTL 72

Query: 107 Y 105
           Y
Sbjct: 73  Y 73


>Z70207-8|CAM33501.1|  835|Caenorhabditis elegans Hypothetical
           protein F15A2.6b protein.
          Length = 835

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 415 VDKHTAHLMASGYRCPWTSAIPGAEPSRWLPLS-TLSNHNVP 537
           VD    + +A  ++ PW S    A+P   LP+S  +  H +P
Sbjct: 281 VDPGKRYSLADVFKHPWVSGTTKADPELELPMSQVVQTHVIP 322


>Z70207-5|CAA94127.2|  914|Caenorhabditis elegans Hypothetical
           protein F15A2.6a protein.
          Length = 914

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 415 VDKHTAHLMASGYRCPWTSAIPGAEPSRWLPLS-TLSNHNVP 537
           VD    + +A  ++ PW S    A+P   LP+S  +  H +P
Sbjct: 281 VDPGKRYSLADVFKHPWVSGTTKADPELELPMSQVVQTHVIP 322


>U64843-11|AAL08038.1|  365|Caenorhabditis elegans Hypothetical
           protein K06C4.17 protein.
          Length = 365

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 11/45 (24%), Positives = 29/45 (64%)
 Frame = -2

Query: 327 LNRFSNVLIIQYGSWNMFLVYKLEFICFIKVYFNLSKVYRYNKNK 193
           + +++ + ++QY   N+F V+K+ F+ FI +  ++  + +Y+ N+
Sbjct: 219 VEKYTFLKVVQYVEENVFSVFKIFFLLFI-INVSIILLLKYSHNE 262


>AF316542-1|AAG50270.1|  914|Caenorhabditis elegans serine/threonine
           kinase SAD-1 protein.
          Length = 914

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 415 VDKHTAHLMASGYRCPWTSAIPGAEPSRWLPLS-TLSNHNVP 537
           VD    + +A  ++ PW S    A+P   LP+S  +  H +P
Sbjct: 281 VDPGKRYSLADVFKHPWVSGTTKADPELELPMSQVVQTHVIP 322


>U41007-21|AAK84502.1|  465|Caenorhabditis elegans Hypothetical
           protein C33H5.18b protein.
          Length = 465

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -2

Query: 306 LIIQYGSWNMFLVYKLEFICFIKVYFNLSKVYR 208
           ++ +  +W MFLV+ ++F CF ++      VYR
Sbjct: 112 IVTRGATWLMFLVFLIQFKCFQEIISIGLAVYR 144


>U41007-20|AAA82275.1|  455|Caenorhabditis elegans Hypothetical
           protein C33H5.18a protein.
          Length = 455

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -2

Query: 306 LIIQYGSWNMFLVYKLEFICFIKVYFNLSKVYR 208
           ++ +  +W MFLV+ ++F CF ++      VYR
Sbjct: 102 IVTRGATWLMFLVFLIQFKCFQEIISIGLAVYR 134


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,927,464
Number of Sequences: 27780
Number of extensions: 263849
Number of successful extensions: 607
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)