Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0462
         (636 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043701-7|AAK18972.1|  498|Caenorhabditis elegans Hypothetical ...   101   3e-22
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p...    28   4.9  
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.      28   4.9  

>AF043701-7|AAK18972.1|  498|Caenorhabditis elegans Hypothetical
           protein K12C11.1 protein.
          Length = 498

 Score =  101 bits (243), Expect = 3e-22
 Identities = 56/119 (47%), Positives = 72/119 (60%), Gaps = 6/119 (5%)
 Frame = +3

Query: 294 TWSMGPGTLEVPLSLFATNRRRLANKLKS----GQIVVLQGGEDVNHYDTDVQYV-FRQE 458
           T+ +   T +VP+ LF  NR RL + LKS      +V+LQGG + N Y+TD   + FRQE
Sbjct: 2   TFQLSEKTFKVPVDLFTENRHRLVDALKSKVPANSVVLLQGGVEKNRYNTDAADLPFRQE 61

Query: 459 AYFTWVCGVREPGCYFALDV-STGKSYLFVPRLPEEYEVWMGKLHACSDFKNIYAVDEV 632
           +YF W  GV E   Y A+DV S GK+ LF PRL   Y +W GK++    FK  YAVDEV
Sbjct: 62  SYFFWTFGVNESEFYGAIDVRSGGKTTLFAPRLDPSYAIWDGKINNEQFFKEKYAVDEV 120


>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
            protein C47D12.1c protein.
          Length = 4053

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 75   FFVYFQLNIYIFIMFLTIASC 13
            F  Y +LNIY + +F+ IASC
Sbjct: 1797 FLRYLRLNIYDYDLFIVIASC 1817


>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
            C47D12.1b protein.
          Length = 4061

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 75   FFVYFQLNIYIFIMFLTIASC 13
            F  Y +LNIY + +F+ IASC
Sbjct: 1803 FLRYLRLNIYDYDLFIVIASC 1823


>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
            C47D12.1a protein.
          Length = 4064

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 75   FFVYFQLNIYIFIMFLTIASC 13
            F  Y +LNIY + +F+ IASC
Sbjct: 1803 FLRYLRLNIYDYDLFIVIASC 1823


>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
          Length = 4064

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 75   FFVYFQLNIYIFIMFLTIASC 13
            F  Y +LNIY + +F+ IASC
Sbjct: 1803 FLRYLRLNIYDYDLFIVIASC 1823


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,222,704
Number of Sequences: 27780
Number of extensions: 294620
Number of successful extensions: 598
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)