Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0460
         (564 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    23   1.8  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   3.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.2  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   5.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.6  

>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
          protein protein.
          Length = 102

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 48 MKTIICLFTSAGRGNGS 98
          M T IC+  S+GR NGS
Sbjct: 1  MSTRICIPISSGRTNGS 17


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 148 ARMFTEVVKNNPGKSVVLS 204
           AR FT+ +KN  G  +V++
Sbjct: 434 ARFFTDCIKNREGFEMVIA 452


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -1

Query: 309 YSIVVREADSFQK 271
           YSI++++ADSF K
Sbjct: 306 YSILIKKADSFCK 318


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 10/39 (25%), Positives = 23/39 (58%)
 Frame = -1

Query: 552 LTKSLMRLLGIFFYPIVNRLSCDCILREINVLDVRIEDV 436
           L+ +++ L+ ++ + +   + CD ILRE + + V +  V
Sbjct: 195 LSINIISLVQLWIFQLYLLILCDQILREFDQIVVILSKV 233


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 521  IPNNRIKDLVNP 556
            +P N+  DLVNP
Sbjct: 1201 VPQNKRDDLVNP 1212


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 521  IPNNRIKDLVNP 556
            +P N+  DLVNP
Sbjct: 1201 VPQNKRDDLVNP 1212


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 521  IPNNRIKDLVNP 556
            +P N+  DLVNP
Sbjct: 1201 VPQNKRDDLVNP 1212


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 521  IPNNRIKDLVNP 556
            +P N+  DLVNP
Sbjct: 1201 VPQNKRDDLVNP 1212


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,262
Number of Sequences: 336
Number of extensions: 2426
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)