Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0460
(564 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1152 + 9170628-9171899 31 0.48
08_01_0224 + 1789447-1789633,1789959-1790261,1793380-1793542,179... 30 1.5
08_01_0906 + 8933230-8933797,8933894-8934543,8937956-8938615,893... 29 1.9
02_01_0384 - 2781362-2782299,2782320-2782428 29 2.6
12_01_0053 - 438527-438670,439038-439247,439401-439530,439672-43... 29 3.4
04_04_1099 - 30886361-30886591,30886739-30886941,30887030-308875... 29 3.4
09_04_0752 + 19933604-19934278,19934679-19935387,19936118-199361... 28 4.5
02_05_1236 + 35141404-35142731,35142753-35143089,35143228-351433... 28 5.9
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 28 5.9
01_06_0373 - 28841462-28842850 28 5.9
12_02_0925 - 24398851-24398998,24399478-24399718,24399886-244005... 27 7.8
11_01_0052 - 396822-396965,397332-397541,397686-397815,397956-39... 27 7.8
09_04_0256 + 16148820-16148998,16149547-16150241,16150317-161505... 27 7.8
08_01_0123 + 974941-975186,975274-977505 27 7.8
07_03_1652 - 28409097-28409165,28409788-28409911,28410317-284105... 27 7.8
07_03_0014 - 12428713-12428860,12429340-12429580,12429664-124303... 27 7.8
05_01_0595 + 5344721-5345249,5349183-5349264,5349813-5350507,535... 27 7.8
01_05_0117 - 18300157-18301106,18301149-18301543,18302592-183026... 27 7.8
>01_01_1152 + 9170628-9171899
Length = 423
Score = 31.5 bits (68), Expect = 0.48
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 2/117 (1%)
Frame = +1
Query: 184 GKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPD-DDAIRTEFASKSRDLRSIKGV 360
G++ ++S S LA +A + GET ELL +G P + R+ LR +
Sbjct: 58 GRNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLPNT 117
Query: 361 ELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKS-INDWVEENTQ 528
A V+V G L FA + + + + DF+ A+ +N +V + T+
Sbjct: 118 --SFACGVWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATE 172
>08_01_0224 +
1789447-1789633,1789959-1790261,1793380-1793542,
1793561-1793597,1794305-1794925
Length = 436
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -1
Query: 378 IRHFKLNAFN*SKITAFTREFCSYSIVVREADSFQKLFMGFTIRS 244
+RH ++ +N + + FC+Y+I + D KL G I+S
Sbjct: 130 VRHREITEYNPKQFCSIPTRFCAYNIAFFDLDKESKLARGPPIKS 174
>08_01_0906 +
8933230-8933797,8933894-8934543,8937956-8938615,
8939751-8939817,8940421-8940724,8942993-8942996,
8944539-8946449
Length = 1387
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/42 (28%), Positives = 28/42 (66%)
Frame = +1
Query: 295 DDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENF 420
+++++ A+K+ ++ ++KG+E+ A K++ G LDE+F
Sbjct: 594 NEESVANYCATKNNNVWNVKGLEVTGAIKLFDQRWGNLDEDF 635
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = -2
Query: 365 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAER 198
S++P R+RL S +SG P +SSS SPS A RGG ++ R
Sbjct: 211 SASPASPSRTRLAPPRSPPAGGASGAPR--RSSSAASPSCAGVEGPRGGEVDDGRR 264
>12_01_0053 -
438527-438670,439038-439247,439401-439530,439672-439842,
440233-440355,440439-440543,440656-441332,441498-441604,
441970-442177,442178-442245,444209-444411,444580-444663,
444780-445109,445238-445438,445667-445744,446236-446306
Length = 969
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 313 TEFASKSRDLRSIKGVELKMANKVYVHDG 399
T+ S S+D++ ++ VE + N VHDG
Sbjct: 520 TQIPSASKDIKEVRAVEEFLPNDFVVHDG 548
>04_04_1099 -
30886361-30886591,30886739-30886941,30887030-30887555,
30887751-30887988,30888592-30888695,30888784-30889059,
30889216-30889218
Length = 526
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +1
Query: 25 FERRRPQT*RQSFVCLLAPVAAMAAVTNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLS 204
+ RR+ Q VC L + ++ + L+ V+K G D +FT +V + G LS
Sbjct: 89 YGRRQLSNGSQKMVCELVSMHSLFQLIVLAIVIKTGPDRRRGFLFTAIVTSGAG---FLS 145
Query: 205 AFS 213
AF+
Sbjct: 146 AFA 148
>09_04_0752 +
19933604-19934278,19934679-19935387,19936118-19936161,
19936607-19936704,19937056-19937160,19937694-19937757,
19938316-19938885
Length = 754
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 353 LIDRRSRLLLANSVRIASSSGK 288
LIDRR RLL NS A++SGK
Sbjct: 643 LIDRRRRLLEVNSAVAAAASGK 664
>02_05_1236 +
35141404-35142731,35142753-35143089,35143228-35143305,
35143395-35143703,35144449-35144572,35144620-35144789
Length = 781
Score = 27.9 bits (59), Expect = 5.9
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 31 RRRPQT*RQSFVCLLA-PVAAMAAVTNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSA 207
RRRP + + LL P+ A A L L++GN + T R+F V+++ + + +
Sbjct: 31 RRRPSLQAHAQLLLLGLPLPAPTASRLLCPHLRSGNPSATLRLFLRVLRDRDRRPCPVDS 90
Query: 208 FSVLPPLAQLALASDGETH 264
+P + + A +H
Sbjct: 91 QEDVPDSSSFSAALAACSH 109
>01_06_0823 +
32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 314 QNSRVKAVIFDQLKALSLKWRIKYTFMMVEN*TRILQSFPGTSSIRTSKTLISRRI 481
+N + K +FD+LKA LK +T + EN +L F + +K I R++
Sbjct: 679 KNKKDKDEVFDELKAAGLKRPCSFTDISSEN--ALLLEFETATDAAAAKAHIRRQL 732
>01_06_0373 - 28841462-28842850
Length = 462
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +1
Query: 196 VLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRD 339
+L+ F LP L A+ GE EEL+ A G P A + RD
Sbjct: 125 ILAFFLYLPVLHAQTTANFGEMGEELVHAPGIPSFPATHSVLPLMERD 172
>12_02_0925 -
24398851-24398998,24399478-24399718,24399886-24400536,
24400625-24400828,24400902-24401583,24401678-24401934,
24402010-24402704,24403150-24403397
Length = 1041
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 448 SDVQNIDFSKNTVAAKSINDWVEENTQ*PH*G 543
SD+ N+D + T A SI +W + N H G
Sbjct: 825 SDLVNLDDLRRTTGASSIAEWADTNVGDTHIG 856
>11_01_0052 -
396822-396965,397332-397541,397686-397815,397956-398126,
398723-398827,398940-399613,399659-399688,399756-399932
Length = 546
Score = 27.5 bits (58), Expect = 7.8
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 313 TEFASKSRDLRSIKGVELKMANKVYVHDG 399
T+ S S+D++ ++ V+ + N VHDG
Sbjct: 139 TQIPSASKDIKEVRAVDEFLPNDFVVHDG 167
>09_04_0256 +
16148820-16148998,16149547-16150241,16150317-16150573,
16150668-16151349,16151423-16151626,16151715-16152449,
16152533-16152698,16153253-16153400
Length = 1021
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 448 SDVQNIDFSKNTVAAKSINDWVEENTQ*PH*G 543
SD+ N+D + T A SI +W + N H G
Sbjct: 802 SDLVNLDDLRRTTGASSIAEWADTNVGDTHIG 833
>08_01_0123 + 974941-975186,975274-977505
Length = 825
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 160 TEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDD 300
T ++ +P +L L +A A A+DG H L +G PDD
Sbjct: 617 TNILNYSPCSVAILVDRGSLSTVAAAAAAADGFPHRVALYFLGGPDD 663
>07_03_1652 -
28409097-28409165,28409788-28409911,28410317-28410557,
28410641-28411375,28411464-28411667,28411741-28412422,
28412517-28412773,28412849-28413543,28414003-28414250
Length = 1084
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 448 SDVQNIDFSKNTVAAKSINDWVEENTQ*PH*G 543
SD+ N+D + T A SI +W + N H G
Sbjct: 825 SDLVNLDDLRRTTGASSIAEWADTNVGDTHIG 856
>07_03_0014 - 12428713-12428860,12429340-12429580,12429664-12430398,
12430487-12430690,12430764-12431445,12431540-12431796,
12431872-12432566,12433012-12433172,12434039-12434383,
12434399-12434631,12434656-12434740
Length = 1261
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 448 SDVQNIDFSKNTVAAKSINDWVEENTQ*PH*G 543
SD+ N+D + T A SI +W + N H G
Sbjct: 1017 SDLVNLDDLRRTTGASSIAEWADTNVGDTHIG 1048
>05_01_0595 + 5344721-5345249,5349183-5349264,5349813-5350507,
5350583-5350839,5350934-5351615,5351689-5351892,
5351981-5352715,5352799-5353181
Length = 1188
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 448 SDVQNIDFSKNTVAAKSINDWVEENTQ*PH*G 543
SD+ N+D + T A SI +W + N H G
Sbjct: 946 SDLVNLDDLRRTTGASSIAEWADTNVGDTHIG 977
>01_05_0117 - 18300157-18301106,18301149-18301543,18302592-18302681,
18303723-18303836,18303903-18304046,18316147-18316312,
18316396-18317130,18317219-18317422,18317496-18318177,
18318272-18318528,18318604-18319298,18319345-18319382,
18319847-18319928,18320018-18320112,18320443-18320526,
18320601-18320891,18321521-18321853,18321948-18322150,
18322243-18322399,18322482-18322585,18322675-18322835,
18323511-18323824,18324317-18324589,18324666-18324967,
18325459-18325549,18326140-18326190,18326700-18326768,
18326926-18327017,18327082-18327148,18328582-18328746,
18329027-18329103,18329572-18329766,18330208-18330275,
18331081-18331172,18331399-18331522,18331608-18331705,
18332384-18332997,18333620-18333626
Length = 2892
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 448 SDVQNIDFSKNTVAAKSINDWVEENTQ*PH*G 543
SD+ N+D + T A SI +W + N H G
Sbjct: 2158 SDLVNLDDLRRTTGASSIAEWADTNVGDTHIG 2189
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,140,278
Number of Sequences: 37544
Number of extensions: 272626
Number of successful extensions: 817
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1293275844
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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