Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0460
(564 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g10385.1 68414.m01170 hypothetical protein 31 0.70
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 30 0.93
At5g37490.1 68418.m04515 U-box domain-containing protein similar... 29 1.6
At1g33390.1 68414.m04133 helicase domain-containing protein simi... 29 1.6
At5g08510.1 68418.m01009 pentatricopeptide (PPR) repeat-containi... 29 2.8
At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containi... 29 2.8
At5g01060.1 68418.m00009 protein kinase family protein contains ... 28 3.7
At2g43210.2 68415.m05371 UBX domain-containing protein contains ... 28 3.7
At2g43210.1 68415.m05370 UBX domain-containing protein contains ... 28 3.7
At2g34610.1 68415.m04252 expressed protein 28 5.0
At2g32620.1 68415.m03982 cellulose synthase family protein simil... 28 5.0
At2g20210.1 68415.m02363 leucine-rich repeat family protein cont... 27 6.5
At5g48940.1 68418.m06054 leucine-rich repeat transmembrane prote... 27 8.7
At5g03730.2 68418.m00334 serine/threonine protein kinase (CTR1) ... 27 8.7
At5g03730.1 68418.m00333 serine/threonine protein kinase (CTR1) ... 27 8.7
At3g15920.1 68416.m02013 phox (PX) domain-containing protein wea... 27 8.7
At1g67650.1 68414.m07720 expressed protein 27 8.7
At1g60770.1 68414.m06841 pentatricopeptide (PPR) repeat-containi... 27 8.7
At1g27580.1 68414.m03361 F-box family protein similar to F-box p... 27 8.7
>At1g10385.1 68414.m01170 hypothetical protein
Length = 754
Score = 30.7 bits (66), Expect = 0.70
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -2
Query: 173 FTTSVNILAVKLSFPFLSTLERFVTAAIAATGASKQTNDCLHVCGLRLSNV 21
+T+ + AVK + F L+R A+ AA G+ + T +C+ +C S++
Sbjct: 303 YTSELVTWAVKQAESFALLLKRHTLASSAAAGSLRVTAECVQLCASHCSSL 353
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 30.3 bits (65), Expect = 0.93
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 204 REDNAFPWIIFHYFGKHSGCEVIVSIFEHIREICDG 97
R D +++F KHS CE+ VS E ++ G
Sbjct: 2 RSDTVLDYVVFELSPKHSKCELFVSSNEQTEKLASG 37
>At5g37490.1 68418.m04515 U-box domain-containing protein similar to
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 435
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1
Query: 228 ERRQHRKCREDNAFPWIIFHYFGKHSGCEVIVSIFEHI 115
E ++RKC +N+ W++ F K SG E + + I
Sbjct: 153 ESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNEI 190
>At1g33390.1 68414.m04133 helicase domain-containing protein similar
to kurz protein [Drosophila melanogaster] GI:5869803;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1237
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 163 EVVKN--NPGKSVVLSAFSVLPPLAQLALASDGETHEELL 276
E VKN +PGK VL +++L P AQL + + E E L+
Sbjct: 636 EQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLV 675
>At5g08510.1 68418.m01009 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 511
Score = 28.7 bits (61), Expect = 2.8
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +1
Query: 103 TNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKA 282
T +S +NGN + +MF + K+ K ++ SVLP A L G E +
Sbjct: 184 TVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARE 243
Query: 283 IGFPDD 300
GF D+
Sbjct: 244 NGFFDN 249
>At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 613
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 201 EDNAFPWIIFHYFGKHSGCEVIVSIFEHIRE 109
+D F ++ +GKH CE + IFE +RE
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIFELLRE 464
>At5g01060.1 68418.m00009 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 499
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 172 KNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFA 324
KN P K+ + L P +D + ELL+ +G+ +D+ + EF+
Sbjct: 337 KNLPEKTKPATESLKLTPFGDACSRADLSSIHELLEKLGYEEDNGVGNEFS 387
>At2g43210.2 68415.m05371 UBX domain-containing protein contains
Pfam profile PF00789: UBX domain
Length = 531
Score = 28.3 bits (60), Expect = 3.7
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -2
Query: 365 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLF 186
S TP+ S +L SV + ++ P ++S V PSE K+ +TEN + T
Sbjct: 138 SETPVSSASSVVLPPGSVPLDAAVASP---STASSVQPSETKSTVTSASTTENNDGTVAV 194
Query: 185 PG 180
G
Sbjct: 195 KG 196
>At2g43210.1 68415.m05370 UBX domain-containing protein contains
Pfam profile PF00789: UBX domain
Length = 531
Score = 28.3 bits (60), Expect = 3.7
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -2
Query: 365 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLF 186
S TP+ S +L SV + ++ P ++S V PSE K+ +TEN + T
Sbjct: 138 SETPVSSASSVVLPPGSVPLDAAVASP---STASSVQPSETKSTVTSASTTENNDGTVAV 194
Query: 185 PG 180
G
Sbjct: 195 KG 196
>At2g34610.1 68415.m04252 expressed protein
Length = 290
Score = 27.9 bits (59), Expect = 5.0
Identities = 33/144 (22%), Positives = 52/144 (36%), Gaps = 12/144 (8%)
Frame = +1
Query: 121 LKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELL---KAIGF 291
L N T R+ V KN P + V + A + + L KA G
Sbjct: 137 LPNKKAKVTERIIQAVSKNQPRNKAIEKCEPVTEQNVHIIAAKEETCNASNLMNSKAYGR 196
Query: 292 PDDDAIRTEFASKSRDLRSIKG-------VELKMANKVYVHDGGKLDENFAVVSRDVFNS 450
D R SK R + IK + + + VH G K DE ++ N
Sbjct: 197 SKSDKARGSVISKERRRQEIKHRHKSYDRSQSDSSKWMVVHKGKKADEEMEEATKKWENV 256
Query: 451 DVQNIDFSK--NTVAAKSINDWVE 516
++ +FSK N + + D+++
Sbjct: 257 KEESEEFSKMSNEELNRRVEDFIQ 280
>At2g32620.1 68415.m03982 cellulose synthase family protein similar
to Zea mays cellulose synthase-5 [gi:9622882], -4
[gi:9622880], -9 [gi:9622890]
Length = 757
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -2
Query: 326 LANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLFPGLFFTTSVNILA 147
L+ +V + S P+ S S + PS+ + + G TE PG F VN+ A
Sbjct: 627 LSKNVFLVSKKTMPVETMSGSGIGPSQREDDGPNSGKTEFDGSLYFLPGTFIVL-VNLAA 685
Query: 146 V 144
+
Sbjct: 686 L 686
>At2g20210.1 68415.m02363 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 604
Score = 27.5 bits (58), Expect = 6.5
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +1
Query: 115 NVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFP 294
N+ KN TAR ++++ P + ++++++PP A L L T + LK +
Sbjct: 503 NISKNRGGLETARFLSKLIPLAPKLISIDASYNLMPPEALLMLCDSLRTAKGDLKRLDMT 562
Query: 295 DDDAIRTE 318
+ I E
Sbjct: 563 GNSCISHE 570
>At5g48940.1 68418.m06054 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1135
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 7/55 (12%)
Frame = -2
Query: 167 TSVNILAVKLSFPF------LSTLERFVTAAIAATGA-SKQTNDCLHVCGLRLSN 24
T +N+++V+L+ PF ++L++ V + TGA S + DC + + LS+
Sbjct: 85 TEINVVSVQLALPFPPNISSFTSLQKLVISNTNLTGAISSEIGDCSELIVIDLSS 139
>At5g03730.2 68418.m00334 serine/threonine protein kinase (CTR1)
identical to serine/threonine-protein kinase CTR1
[Arabidopsis thaliana] SWISS-PROT:Q05609
Length = 821
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 274 LKAIGFPDDDAIRTEFASKSRDLR 345
++++GFP DD R F DLR
Sbjct: 121 IESVGFPQDDGFRLGFGGGGGDLR 144
>At5g03730.1 68418.m00333 serine/threonine protein kinase (CTR1)
identical to serine/threonine-protein kinase CTR1
[Arabidopsis thaliana] SWISS-PROT:Q05609
Length = 821
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 274 LKAIGFPDDDAIRTEFASKSRDLR 345
++++GFP DD R F DLR
Sbjct: 121 IESVGFPQDDGFRLGFGGGGGDLR 144
>At3g15920.1 68416.m02013 phox (PX) domain-containing protein weak
similarity to myosin heavy chain [Rana catesbeiana]
GI:4249699; contains Pfam profile PF00787: PX domain
Length = 755
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 391 HDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTQ 528
HD DE + ++++N+ FS+N+ A ++ DW E T+
Sbjct: 262 HDNDSADETSNASTMKHDEANLKNL-FSRNSTAVDNVTDWHELITE 306
>At1g67650.1 68414.m07720 expressed protein
Length = 651
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/80 (22%), Positives = 42/80 (52%)
Frame = +1
Query: 121 LKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDD 300
L++G + +R++ E+VKN+ ++ ++ LA++ + E +E+ LK + P
Sbjct: 470 LRHGQEEEASRLYEEIVKNHNSTDALV---GLVTTLARVNV-EKAEAYEKQLKPL--PGL 523
Query: 301 DAIRTEFASKSRDLRSIKGV 360
A+ + K+ + I+G+
Sbjct: 524 KAVDVDNLEKTSGAKPIEGI 543
>At1g60770.1 68414.m06841 pentatricopeptide (PPR) repeat-containing
protein low similarity to DNA-binding protein [Triticum
aestivum] GI:6958202; contains Pfam profile PF01535: PPR
repeat
Length = 491
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 106 NLSNVLKNGNDNFTARMFTEVVK 174
NL +LKNG DN A +F +++
Sbjct: 431 NLLEILKNGTDNIGAEIFEPLIR 453
>At1g27580.1 68414.m03361 F-box family protein similar to F-box
protein family, AtFBX7 (GI:20197899) [Arabidopsis
thaliana]; confirmed by FLcDNA GI:16604421; contains
uncharacterized Arabidoppsis domain shared by 33
Arabidopsis proteins;simlar to unknown protein
GB:AAC63676
Length = 364
Score = 27.1 bits (57), Expect = 8.7
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 265 EELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANKVYV 390
EE +K + D+D R EF + DLR V+ K N V V
Sbjct: 96 EENVKHMLMDDEDPFRDEFPHAAEDLRGRLWVDDKNGNYVVV 137
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,549,023
Number of Sequences: 28952
Number of extensions: 224947
Number of successful extensions: 775
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1082538160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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