Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0459
         (491 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   1.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   1.1  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   8.0  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   8.0  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -3

Query: 141 LTIMEVVAALKPTSFDTSIFLTSYRSGNFSKNIQF 37
           +T   V A +   S +  +FL  +R+G +  +I F
Sbjct: 457 MTFQNVFAVINVFSGELPVFLQEHRNGMYRPSIYF 491


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -3

Query: 141 LTIMEVVAALKPTSFDTSIFLTSYRSGNFSKNIQF 37
           +T   V A +   S +  +FL  +R+G +  +I F
Sbjct: 457 MTFQNVFAVINVFSGELPVFLQEHRNGMYRPSIYF 491


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -2

Query: 91  EHISHFLSIREFLQEYSVLTVKLTLV 14
           EH +   S R  +    + TVK+TLV
Sbjct: 265 EHDTRRASSRGIIPRAKIKTVKMTLV 290


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +1

Query: 232 WQSPRCQPCCRERAE 276
           WQ  R   CC+E  E
Sbjct: 81  WQMERSCMCCQESGE 95


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,331
Number of Sequences: 336
Number of extensions: 2169
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)