Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0458
         (523 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            57   4e-10
DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.      30   0.041
AY724808-1|AAW50317.1|  206|Anopheles gambiae G protein alpha su...    30   0.054
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       23   4.7  
EF519475-2|ABP73560.1|  177|Anopheles gambiae CTL4 protein.            23   6.2  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   8.2  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   8.2  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 56.8 bits (131), Expect = 4e-10
 Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
 Frame = +2

Query: 134 EMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVTKGNVTIK--VWDIGGQ 301
           + +L L+G    GK++ V     GQF E    T+G  F  + +   + T+K  +WD  GQ
Sbjct: 24  QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQ 83

Query: 302 PRFRSMWERYCRGVNAIVYMVDAADPDKIEASRNELHSLLEKQQLTGIPVLVLGNKRDL 478
            R+ S+   Y RG  A + + D  + D    ++  +   L++Q    I + + GNK DL
Sbjct: 84  ERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKE-LQRQASPNIVIALAGNKADL 141


>DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.
          Length = 353

 Score = 30.3 bits (65), Expect = 0.041
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = +2

Query: 224 IPTVGFNMRKVTKGNVTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKI 388
           +PT G          +  ++ D+GGQ   R  W      V +I+++V  ++ D+I
Sbjct: 178 VPTTGIIEYPFDLEEIRFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQI 232



 Score = 24.2 bits (50), Expect = 2.7
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
 Frame = +2

Query: 128 KEEMELTLVGLQYSGKTTFVN----VIASGQFSED 220
           + E++L L+G   SGK+TF+     +  SG   ED
Sbjct: 31  RRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDED 65


>AY724808-1|AAW50317.1|  206|Anopheles gambiae G protein alpha
           subunit AgGq6 protein.
          Length = 206

 Score = 29.9 bits (64), Expect = 0.054
 Identities = 14/54 (25%), Positives = 26/54 (48%)
 Frame = +2

Query: 227 PTVGFNMRKVTKGNVTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADPDKI 388
           PT G         ++  ++ D+GGQ   R  W      V +I+++V  ++ D+I
Sbjct: 36  PTTGILEYPFDLDSIIFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQI 89


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 21/71 (29%), Positives = 27/71 (38%)
 Frame = +1

Query: 130 GGNGAYTGGLAVFGQNNFC*RHCFRPV**RHDSNSRFQHAQSNQRKRNNQGMGYWWPTKI 309
           G  G YT    V G N FC +        R     +  +A      RNNQ +GY     +
Sbjct: 301 GTVGRYTREPGVMGYNEFCEKLATEAWDLRWSEEQQVPYA-----VRNNQWVGYDDLRSV 355

Query: 310 PFNVGALLQRG 342
              V  LL +G
Sbjct: 356 QLKVKYLLDQG 366


>EF519475-2|ABP73560.1|  177|Anopheles gambiae CTL4 protein.
          Length = 177

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -1

Query: 355 HNSIDPSAITLPH*TESWLATN 290
           +N ++PS + +   T SW+AT+
Sbjct: 144 NNRVEPSCVYIQGSTMSWVATS 165


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 178 CFARILQAHQCKLHFLLPKQAFNPI 104
           CFAR  Q++  K H ++ +    P+
Sbjct: 273 CFARFTQSNSLKAHKMIHQVGNKPV 297


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = -2

Query: 177 VLPEYCKPTSVSSISSFQNKLLIQSKMRLIKASISE*LKSKFNRN 43
           V  E+C    V++I  F+ + L+  + R  K +  E    + N N
Sbjct: 788 VYAEFCARIGVANIRQFEERELVLQQERAKKRAEFEQQIDRINNN 832


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,676
Number of Sequences: 2352
Number of extensions: 9922
Number of successful extensions: 106
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)