Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0458
         (523 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    23   1.4  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   5.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   5.8  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   7.7  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   7.7  

>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = +2

Query: 158 LQYSGKTTFVNVIASGQFSEDMI--PTV 235
           L++S    ++N I  GQF  D+I  PTV
Sbjct: 75  LKFSNIAPYLNQIYGGQFVRDLIWTPTV 102


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = +1

Query: 217 RHDSNSRFQHAQSNQRKRNNQGMGYWWPTKIPFNVGALLQRGQ 345
           +H  +SR      N   +N QG        IP N  ALL   +
Sbjct: 164 QHHLDSRVIQEAQNIAIQNTQGKNNQQNILIPVNYSALLSHDE 206


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 260  KGNVTIKVWDIGGQPRFR 313
            KGN+  K+W + G+ + R
Sbjct: 1015 KGNMQWKIWPMKGEEKSR 1032


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +2

Query: 47  RLNLDFNHSEMLALINRILDWIKSLFWKEEMELTLVG 157
           R+N    +  MLAL NR+   + + F  +E+   ++G
Sbjct: 369 RMNRIHKNEYMLALSNRMQKIVNNDFNFDEVNFRILG 405


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 217 RHDSNSRFQHAQSNQRKRNNQ 279
           ++D+N +     +N +K NNQ
Sbjct: 429 QNDNNQKNNKKNANNQKNNNQ 449


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,334
Number of Sequences: 438
Number of extensions: 2683
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)