Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0455
         (570 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    27   0.11 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   1.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.4  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   4.2  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    22   4.2  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   7.4  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   9.8  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   9.8  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   9.8  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 5/72 (6%)
 Frame = -1

Query: 447 NPKPG*YRPAAPLSRRLSPMLQVLDPPIEVPAGDPGSAGRP-----KSGSTETTSRPPRP 283
           N +   Y    P S  LSP   V +PP  +    P SA  P      +  T TT   P  
Sbjct: 262 NNRASPYPMQRPKSASLSPPPHVYNPPDHIQQATPYSAPGPTYSTWSTVQTPTTVMSPTI 321

Query: 282 LHWRESRSVPSP 247
             W  + S P P
Sbjct: 322 NCWSLTSSPPPP 333


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 498 QGSIVERSCSTVGQSYLQL 554
           +G+I +RSC  V Q YL++
Sbjct: 139 RGAIGQRSCQVVIQCYLEI 157


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = -2

Query: 389 CFKC*ILPLKSRLATLVRPAGRSLAP--PKPPPDHP 288
           C KC  +PL+ +   + R   RS+    P+P  D P
Sbjct: 62  CMKCECVPLQKKRRIVARVQCRSIKNECPEPTCDEP 97



 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 301 LPTTQASTLARVTIGTLTGRRG 236
           L T   S+L    +GT+TG  G
Sbjct: 274 LATENFSSLLEPAVGTMTGAGG 295


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = -2

Query: 368 PLKSRLATLVRPAGRSLAPPKPPPDHPGLYIGES 267
           PLKS  +        +L  PK P +HP   + +S
Sbjct: 18  PLKSSFSISSILPETALEAPKSPENHPETELSDS 51


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 144 DACRVRPETKKNTIVAGQRCCV 79
           D C  R   KKN IV  + C V
Sbjct: 36  DPCYGRHFFKKNLIVGSENCLV 57


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 311 PKPPPDHPGLYIGESHDR 258
           P PP D  G  +G ++D+
Sbjct: 323 PAPPQDSMGYSMGSAYDQ 340


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +3

Query: 153 PAAVPELQRSAPCPVVPGKFGHTGAA 230
           P+ V     S P P++  +FG    A
Sbjct: 124 PSGVISTNTSPPSPILSNRFGENEEA 149


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = +1

Query: 427 VLARFWIRMATLC 465
           + A+FW+ +A  C
Sbjct: 1   MFAKFWVNLALFC 13


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -1

Query: 534 QPYCKIARQYCPAHRNIITELEPAQCCH 451
           +P   +   YCP     I +++ A C H
Sbjct: 152 EPILYLIFSYCPIVTTGIIKIQFATCAH 179


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,254
Number of Sequences: 336
Number of extensions: 3942
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)