Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P5PG0455
(570 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16595| Best HMM Match : Peptidase_A17 (HMM E-Value=9.1e-11) 38 0.008
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 33 0.16
SB_51966| Best HMM Match : zf-CCHC (HMM E-Value=0.00038) 33 0.22
SB_23957| Best HMM Match : Lectin_C (HMM E-Value=1.2) 33 0.22
SB_42797| Best HMM Match : Peptidase_A16_N (HMM E-Value=2e-05) 33 0.22
SB_54032| Best HMM Match : Peptidase_A17 (HMM E-Value=5.20022e-42) 32 0.38
SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38) 32 0.38
SB_21351| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_25063| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.50
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 31 0.66
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 31 0.66
SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0) 31 0.66
SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) 30 1.2
SB_601| Best HMM Match : TSP_1 (HMM E-Value=1.8) 30 1.2
SB_37355| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_6985| Best HMM Match : PSD2 (HMM E-Value=2) 30 1.5
SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0) 30 1.5
SB_52234| Best HMM Match : BRF1 (HMM E-Value=0.85) 29 2.0
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_39239| Best HMM Match : zf-CCHC (HMM E-Value=0.0017) 29 2.0
SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32) 29 2.0
SB_47653| Best HMM Match : zf-CCHC (HMM E-Value=0.0017) 29 2.0
SB_28489| Best HMM Match : SAB (HMM E-Value=6) 29 2.0
SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33) 29 2.0
SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_43219| Best HMM Match : zf-CCHC (HMM E-Value=0.0056) 29 3.5
SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_18553| Best HMM Match : fn3 (HMM E-Value=0.25) 29 3.5
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_16017| Best HMM Match : Peptidase_A17 (HMM E-Value=1.2e-19) 29 3.5
SB_9151| Best HMM Match : WAP (HMM E-Value=0.045) 29 3.5
SB_56113| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 28 4.7
SB_54145| Best HMM Match : zf-CCHC (HMM E-Value=0.021) 28 4.7
SB_25173| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_20716| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_50940| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_24965| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 28 6.2
SB_56161| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_32385| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14) 28 6.2
SB_1173| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_36009| Best HMM Match : Collagen (HMM E-Value=0) 24 6.9
SB_53799| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0) 27 8.2
SB_3027| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_39621| Best HMM Match : Extensin_2 (HMM E-Value=0.078) 27 8.2
SB_24809| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
>SB_16595| Best HMM Match : Peptidase_A17 (HMM E-Value=9.1e-11)
Length = 1692
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 118 CFGPHTASVCTHQQLCPNC-NGRHHALLC 201
CFG H S C +LC C +G HH LLC
Sbjct: 680 CFGDHLRSKCPSTRLCSKCQSGDHHVLLC 708
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 33.1 bits (72), Expect = 0.16
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = -3
Query: 529 VLQDRSTILPCAPEYNNRA-RASTVLPSESKTWLVPARSTTLQAPLPDASSARSSH*SPG 353
+LQ S I PC N+ R++ LP+ S+ +T L +P+P S+R H
Sbjct: 394 LLQKTSEIFPCESTNNSTILRSAQYLPNASEN------NTVLFSPVPTFFSSRGWHSLSS 447
Query: 352 WRPWFGRPAEVW 317
WR G A W
Sbjct: 448 WRSAAGLSAGAW 459
>SB_51966| Best HMM Match : zf-CCHC (HMM E-Value=0.00038)
Length = 447
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 112 FFCFGP-HTASVCTHQQLCPNCNGRHHALLCLE 207
F C H ++ C ++ C +C GRHH +C E
Sbjct: 83 FICLKKGHRSNECFNKDGCSDCRGRHHVSICYE 115
>SB_23957| Best HMM Match : Lectin_C (HMM E-Value=1.2)
Length = 120
Score = 32.7 bits (71), Expect = 0.22
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 112 FFCFGPHTASVCTHQQLCPNC 174
F C+GP + +C H CPNC
Sbjct: 28 FHCYGPASYRICPHGLACPNC 48
>SB_42797| Best HMM Match : Peptidase_A16_N (HMM E-Value=2e-05)
Length = 668
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +1
Query: 112 FFCFGP-HTASVCTHQQLCPNCNGRHHALLCLE 207
F C H ++ C ++ C +C GRHH +C E
Sbjct: 359 FICLKKGHRSNECFNKDGCSDCRGRHHVSICYE 391
>SB_54032| Best HMM Match : Peptidase_A17 (HMM E-Value=5.20022e-42)
Length = 832
Score = 31.9 bits (69), Expect = 0.38
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 130 HTASVCTHQQLCPNCNGRHHALLC 201
H +S CT + C C G+HH +C
Sbjct: 111 HISSKCTSKFRCRQCGGKHHTTIC 134
>SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38)
Length = 1301
Score = 31.9 bits (69), Expect = 0.38
Identities = 27/99 (27%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Frame = -1
Query: 468 PAQCCHPNPKPG*YRPAAPLSRRLSPMLQVLDPPIEVPAGDPGSAGRPKSGSTETTSRPP 289
PA C + +P +PA + R SP V DP +P S R S + + +RPP
Sbjct: 962 PASSCSDSERPSETKPAVVTAPRRSPPPLVSDPKPRDGVSNPDS--RKSSPALDQVARPP 1019
Query: 288 RPLHWRES--RSVPSP-VGEAGWLRPYDRIFQAQQGMVP 181
R + +S P P + G +P + + G P
Sbjct: 1020 SQPQERPTSFKSWPPPQLAPGGGAQPKSFLEELFNGAPP 1058
>SB_21351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 31.9 bits (69), Expect = 0.38
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 130 HTASVCTHQQLCPNCNGRHHALLC 201
H +S CT + C C G+HH +C
Sbjct: 424 HISSKCTSKFRCRQCRGKHHTTIC 447
>SB_25063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1203
Score = 31.5 bits (68), Expect = 0.50
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 130 HTASVCTHQQLCPNCNGRHHALLC 201
H A C + C NC+GRHH C
Sbjct: 581 HRADRCRSKTNCQNCDGRHHTSKC 604
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 31.1 bits (67), Expect = 0.66
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -1
Query: 372 PPIEVPAGDPGSAGRPKSGSTET-TSRPPRPLHWRESRSVPSPVGEAGWLRPYDRIFQAQ 196
PP + P S +P G++ T T+ PP P H R + P P +G P +Q
Sbjct: 167 PPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSRHGSAPPPPERSSGPPPPPPGRGPSQ 226
Query: 195 QGMVP 181
+ + P
Sbjct: 227 RSLAP 231
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 31.1 bits (67), Expect = 0.66
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -1
Query: 372 PPIEVPAGDPGSAGRPKSGSTET-TSRPPRPLHWRESRSVPSPVGEAGWLRPYDRIFQAQ 196
PP + P S +P G++ T T+ PP P H R + P P +G P +Q
Sbjct: 79 PPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSRHGSAPPPPERSSGPPPPPPGRGPSQ 138
Query: 195 QGMVP 181
+ + P
Sbjct: 139 RSLAP 143
>SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0)
Length = 942
Score = 31.1 bits (67), Expect = 0.66
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -1
Query: 453 HPNPKPG*YRPAAPLSRRLSPMLQVLDPPIEVPAGDPGSAGRPKSGSTETTSRPPR 286
HPN Y P++ + P QVL+ P PGS ++G+++ T +PPR
Sbjct: 111 HPNSAQ--YPPSSSFGANM-PSNQVLNGPSSRGTPPPGSRQMDQTGASQQTRQPPR 163
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = -1
Query: 450 PNPK-PG*YRPAAPLSRRLSPMLQVLDPPIEVPAGDPGSAGRPKSGSTETTSRPPRPLHW 274
P+P P +PA P + P P P GD G A +P G RP +
Sbjct: 306 PSPSVPHQSQPAVPPAFATPPRSGASTPSGAPPTGDEGMAPQPGQGQA-------RPSYM 358
Query: 273 RESRSVPSPVGEAGW 229
+ R P+ G+ G+
Sbjct: 359 NKRRQYPAQGGQPGY 373
>SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)
Length = 1728
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Frame = -1
Query: 516 ARQYCPAHR---NIITELEPAQCCHPNPKPG*YRPAAPLSRRLSPMLQVLD---PPIEVP 355
++ CPAH+ N+ T ++ HP+PK P +P RLS + D P I P
Sbjct: 1336 SKSSCPAHKQRLNVPTSIDNNLGRHPSPKSADLFPESPCRERLSKKDNISDEDSPIIRKP 1395
Query: 354 AGDPGSAGRPKS 319
S P+S
Sbjct: 1396 TKSAQSIIFPES 1407
>SB_601| Best HMM Match : TSP_1 (HMM E-Value=1.8)
Length = 394
Score = 30.3 bits (65), Expect = 1.2
Identities = 26/95 (27%), Positives = 36/95 (37%), Gaps = 2/95 (2%)
Frame = -3
Query: 502 PCAPEYNNRARA--STVLPSESKTWLVPARSTTLQAPLPDASSARSSH*SPGWRPWFGRP 329
PC EYNN R + P+ S + PA L + + +S P P F
Sbjct: 9 PCPDEYNNMDRMCNTNPFPAPSIVLVYPAPQNGGPYCLGEGQATQSCDMGPCPGPDFYIA 68
Query: 328 AEVWLHRNHLPTTQASTLARVTIGTLTGRRGWLAA 224
R+HLPT S + T + + W AA
Sbjct: 69 RSAAGQRSHLPTRDPSRASFQTDAAIEHAQYWRAA 103
>SB_37355| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 264
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Frame = -3
Query: 403 APLPDASSARSSH*SPGWRPWFGR-----PAEVWLHRNHLPTTQ--ASTLARVTIGTLTG 245
A + ++S + SS PG++PW GR V + L TQ AS+ + L G
Sbjct: 60 AQINNSSMSASSWLGPGFKPWLGRLNSVKGRAVGMESGELEATQITASSSRFPQLARLHG 119
Query: 244 RRGW 233
R GW
Sbjct: 120 RSGW 123
>SB_6985| Best HMM Match : PSD2 (HMM E-Value=2)
Length = 254
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +1
Query: 388 HRGEAPGEWCCGPVLARFWIRMATLCWLELCYYIPVRRAVLSSDLAVRLGNPI 546
H + G+ V + FW + + C+Y PV A LS+D V LG I
Sbjct: 85 HGEDGEGDAVLRDVFSVFWGQFTSEFCERACHYTPVTSAALSNDDYVALGRII 137
>SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0)
Length = 1066
Score = 29.9 bits (64), Expect = 1.5
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Frame = -1
Query: 396 SPMLQVLDPPIEVPAGDPGSAGRPKSGSTETTSRPPRPLHW-RESRSVPSPVGE-----A 235
+P V++PP PA A RP S T+ PP P S VP E +
Sbjct: 770 APPTTVINPPQAKPAEPEPLAPRPSSPQTQPAPAPPEPAAAPTSSNDVPDSSKEKDEKVS 829
Query: 234 GWLRPYDRIF 205
GW RP +F
Sbjct: 830 GW-RPRVNVF 838
>SB_52234| Best HMM Match : BRF1 (HMM E-Value=0.85)
Length = 371
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +1
Query: 388 HRGEAPGEWCCGPVLARFWIRMATLCWLELCYYIPVRRAVLSSDLAVRLGNPI 546
H + G+ V + FW + + C+Y PV A LS+D V LG I
Sbjct: 264 HGEDGEGDAVLRDVYSVFWEQFTSKFCEGACHYTPVTSAALSNDDYVALGRII 316
>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/95 (22%), Positives = 39/95 (41%)
Frame = -3
Query: 535 PTVLQDRSTILPCAPEYNNRARASTVLPSESKTWLVPARSTTLQAPLPDASSARSSH*SP 356
PT Q +T LP + + +T +PS + +TTL + ++ +++ P
Sbjct: 203 PTTNQQTTTTLPSTKQPTTTQQTTTTIPSTKQPTTTQQTTTTLPSTKQPTTTQQTTTTLP 262
Query: 355 GWRPWFGRPAEVWLHRNHLPTTQASTLARVTIGTL 251
+ +P L P+T+ T + T TL
Sbjct: 263 STK----QPTTPQLTTTTFPSTKQPTTTQQTTATL 293
Score = 27.9 bits (59), Expect = 6.2
Identities = 22/95 (23%), Positives = 35/95 (36%)
Frame = -3
Query: 535 PTVLQDRSTILPCAPEYNNRARASTVLPSESKTWLVPARSTTLQAPLPDASSARSSH*SP 356
PT Q +T +P + + +T LPS + +TT LP + +
Sbjct: 219 PTTTQQTTTTIPSTKQPTTTQQTTTTLPSTKQPTTTQQTTTT----LPSTKQPTTPQLTT 274
Query: 355 GWRPWFGRPAEVWLHRNHLPTTQASTLARVTIGTL 251
P +P LP+T+ T + T TL
Sbjct: 275 TTFPSTKQPTTTQQTTATLPSTKQPTTTQQTTATL 309
>SB_39239| Best HMM Match : zf-CCHC (HMM E-Value=0.0017)
Length = 307
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +3
Query: 141 RLHTPAAVPELQRSAPCPVVPGKFGHTGAASQPRRPVRVPIVTLANVEA 287
++ + +PE ++ C GK GH QPRR +V + ++ ++ A
Sbjct: 43 KIFATSLLPEPAKNCSCNNC-GKEGHYAKVCQPRRAAKVTVASICSISA 90
>SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32)
Length = 1626
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +1
Query: 124 GPHTASVCTHQQLCPNCNGRHHALLC--LENSVIRAQPAS 237
G H A+ C C CN RHH +C +++S+ + PA+
Sbjct: 311 GGHMATKCKAGN-CAKCNSRHHTSICDRVQSSLPPSTPAN 349
>SB_47653| Best HMM Match : zf-CCHC (HMM E-Value=0.0017)
Length = 759
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +3
Query: 141 RLHTPAAVPELQRSAPCPVVPGKFGHTGAASQPRRPVRVPIVTLANVEA 287
++ + +PE ++ C GK GH QPRR +V + ++ ++ A
Sbjct: 312 KIFATSLLPEPAKNCSCNNC-GKEGHYAKVCQPRRAAKVTVASICSISA 359
>SB_28489| Best HMM Match : SAB (HMM E-Value=6)
Length = 149
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 9 ARGCMKAGIRIIVSKFRSTRMRGRRNIVAQRRWCFFLFRAA 131
A G + AG+ + S+ + R R +I QRRWC LF ++
Sbjct: 98 AVGTVPAGLMLAQSQAQGPRSNKRHSI--QRRWCLVLFTSS 136
>SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33)
Length = 1485
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +1
Query: 124 GPHTASVCTHQQLCPNCNGRHHALLC--LENSVIRAQPAS 237
G H A+ C C CN RHH +C +++S+ + PA+
Sbjct: 205 GGHMATKCKAGN-CAKCNSRHHTSICDRVQSSLPPSTPAN 243
>SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 911
Score = 29.1 bits (62), Expect = 2.7
Identities = 27/81 (33%), Positives = 31/81 (38%), Gaps = 6/81 (7%)
Frame = -1
Query: 507 YCPAHRNIITELEPAQCCHPN-PKPG*YRPAAPLSRRLSPMLQV-----LDPPIEVPAGD 346
Y P HR T PA P+ P+PG Y P P P PP P G
Sbjct: 569 YVPDHRT--TGGYPAPT--PSYPQPGTYPPPHPSGGYPQPSPPHGGHPHHPPPTGYPGGY 624
Query: 345 PGSAGRPKSGSTETTSRPPRP 283
PG+ P +G T PP P
Sbjct: 625 PGTHTAPPAGGYPTGQHPPPP 645
>SB_43219| Best HMM Match : zf-CCHC (HMM E-Value=0.0056)
Length = 693
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 124 GPHTASVCTHQQLCPNCNGRHHALLC 201
G H A C + C C RHH +C
Sbjct: 269 GKHRAEECKSKSNCFKCKQRHHTSIC 294
>SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +2
Query: 155 SSCARTATVGTMPCCAWKIRSYGRS-QPASPTGEGTDRDSRQCRGLG 292
S C+ G C + Y ++ P+ P+G DRD+ C+ G
Sbjct: 676 SGCSACHVTGQCTACMLGLHLYNKTCVPSCPSGTYLDRDTNSCQQCG 722
>SB_18553| Best HMM Match : fn3 (HMM E-Value=0.25)
Length = 1702
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 382 SARSSH*SPGWRPWFGRPAEVWLHRNHLPTTQ 287
S+ SH S WRP+ +E+W ++ + TT+
Sbjct: 259 SSNISHISAHWRPFVDEESEIWFYKWAVGTTR 290
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 28.7 bits (61), Expect = 3.5
Identities = 26/96 (27%), Positives = 37/96 (38%)
Frame = -1
Query: 534 QPYCKIARQYCPAHRNIITELEPAQCCHPNPKPG*YRPAAPLSRRLSPMLQVLDPPIEVP 355
QP K RQ+ + + L+P P P + + P ++ L P + PP VP
Sbjct: 998 QP-AKPPRQHTQCSIDPVPHLKPPGPTE-QPVPPKRKASPPSAQPLPPPRKPSPPPSAVP 1055
Query: 354 AGDPGSAGRPKSGSTETTSRPPRPLHWRESRSVPSP 247
P P S +PP P S+ VP P
Sbjct: 1056 IPPPRKPSPPPSEPAPPPRQPPPP---STSQPVPPP 1088
>SB_16017| Best HMM Match : Peptidase_A17 (HMM E-Value=1.2e-19)
Length = 879
Score = 28.7 bits (61), Expect = 3.5
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 130 HTASVCTHQQLCPNCNGRHHALLC 201
H +S CT + C C G+ H +C
Sbjct: 223 HISSKCTSKFRCRQCGGKRHTTIC 246
>SB_9151| Best HMM Match : WAP (HMM E-Value=0.045)
Length = 1865
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 382 SARSSH*SPGWRPWFGRPAEVWLHRNHLPTTQ 287
S+ SH S WRP+ +E+W ++ + TT+
Sbjct: 945 SSNISHISAHWRPFVDEESEIWFYKWAVGTTR 976
>SB_56113| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 1163
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = -1
Query: 426 RPAAPLSRRLSPMLQVL--DPPIEVPAGDPGSAGRPKSGS-TETTSRPP 289
RP+ PL+R P D P P +PGSA P+ S + S PP
Sbjct: 1092 RPSPPLTRDTGPGTGTTGSDTPTRPPETEPGSAEAPEPVSPAKPPSNPP 1140
>SB_54145| Best HMM Match : zf-CCHC (HMM E-Value=0.021)
Length = 286
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 124 GPHTASVCTHQQLCPNCNGRHHALLC 201
G H A C + C C RHH +C
Sbjct: 29 GKHHAEECKSKSNCFKCKRRHHTSIC 54
>SB_25173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 28.3 bits (60), Expect = 4.7
Identities = 23/75 (30%), Positives = 32/75 (42%)
Frame = +3
Query: 234 QPRRPVRVPIVTLANVEAWVVGRWFRWSQTSAGRPNQGRQPGLQWEDLALEASGRGAWRV 413
QP PVR+P LA V ++ +G R S TS G G+ + +
Sbjct: 59 QPHLPVRLPCYDLAPVTSFTLGSSLR-SPTSGTPSFHGLTGGVYKARERIHRIMADIRLL 117
Query: 414 VLRAGTSQVLDSDGN 458
+ A S+V DSD N
Sbjct: 118 AIPASRSRVADSDPN 132
>SB_20716| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 423
Score = 28.3 bits (60), Expect = 4.7
Identities = 27/85 (31%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
Frame = -1
Query: 426 RPAAPLSRRLSPMLQVLDPPIEVPAGDPGSAGRPKSGSTETTSRPPRPLHWRE---SRSV 256
R A P +S Q L P+ PA +P S +TET SRP S V
Sbjct: 338 RTAPPCQDGMSHRDQKL-LPMTTPAAEPLSCTEGDGDATETLSRPQTTRQQNPPTISEEV 396
Query: 255 PSPVGEAGWLRPYDRIFQAQQGMVP 181
P GE R R +A +G+ P
Sbjct: 397 PEDAGEPDMPR---RSSRANKGIAP 418
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 28.3 bits (60), Expect = 4.7
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = -1
Query: 471 EPAQCCHPNPKPG*YRPAAPLSRRLSPMLQVLDPPIEVPAGDPGSAGRP--KSGSTETTS 298
EP + P P G P R+L+ +P P G PGS G+P +S S+ETT+
Sbjct: 1478 EPEKRDLPLPTGGLPPTVRPDERKLTQ-----NPAPSAPEGKPGSPGQPSRQSASSETTN 1532
Query: 297 RPPRP 283
P
Sbjct: 1533 EKLLP 1537
>SB_50940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -3
Query: 535 PTVL--QDRSTILPCAPEYNNRARASTVLPSESKTWLVPARSTTLQAPLPDASSARSS 368
PT + ++ T + A NNR+ +S PS+++T +TTL P P + ++
Sbjct: 454 PTTIKREELYTFVQAAEAENNRSSSSQPPPSQNQTTASTTTTTTLGNPTPSQEQSATT 511
>SB_24965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 352
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 469 LELCYYIPVRRAVLSSDLAVRLGNPIYNYSHFIR 570
L LCYYI +VLS ++ + + + H+IR
Sbjct: 289 LSLCYYIKASSSVLSLCHYIKASSSVLSQCHYIR 322
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 427 VLARFWIRMATLCWLELCYYIPVRRAVLSSDLAVRLGNPIYNYSHFIR 570
VL+ + A+ L LC+YI +VLS +R + + + H+I+
Sbjct: 288 VLSLCYYIKASSSVLSLCHYIKASSSVLSQCHYIRASSSVLSLCHYIK 335
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/63 (26%), Positives = 24/63 (38%)
Frame = +3
Query: 306 FRWSQTSAGRPNQGRQPGLQWEDLALEASGRGAWRVVLRAGTSQVLDSDGNTVLARALLL 485
F W ++ G P+ P + GRG R+ L TS D N V+ + L
Sbjct: 350 FDWQKSRTGTPSSNTGPTSDHTGNGGKKDGRGQKRIFLYIETSFPRQPDDNAVIEKTGLS 409
Query: 486 YSG 494
G
Sbjct: 410 LDG 412
>SB_56161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 335 PAGRSLAPPKPPPDHPGLYIGESHDRYP 252
P G PP PPP +P + G + +YP
Sbjct: 171 PPGNYPPPPAPPPAYPPVTQGYNMSQYP 198
>SB_32385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1322
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 296 DHPGLYIGESHDRYPHRSARLAGCARMTEF 207
D L++ H Y H+ RLAG A +EF
Sbjct: 958 DALALFLHHKHGDYTHQKLRLAGYAAQSEF 987
>SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14)
Length = 635
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -1
Query: 150 CADACRVRPETKKNTIVAGQRCCVCPSCAST 58
CA C +T+K ++V+G+ C+ SC+S+
Sbjct: 257 CAKVCACA-DTEKCSVVSGECTCIAGSCSSS 286
>SB_1173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 406
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +1
Query: 460 LCWLELC--YYIPVRRAVLSSDLAVRLG 537
+ W+E C Y +P+R A L +D ++LG
Sbjct: 3 MAWVEFCGAYSLPIRSATLINDQQMKLG 30
>SB_36009| Best HMM Match : Collagen (HMM E-Value=0)
Length = 687
Score = 23.8 bits (49), Expect(2) = 6.9
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 375 DPPIEVPAGDPGSAGRP 325
+P + P GDPG G P
Sbjct: 146 EPGTQGPRGDPGDVGEP 162
Score = 22.2 bits (45), Expect(2) = 6.9
Identities = 12/40 (30%), Positives = 15/40 (37%)
Frame = -1
Query: 351 GDPGSAGRPKSGSTETTSRPPRPLHWRESRSVPSPVGEAG 232
G+PG AG T+ PP + P G AG
Sbjct: 160 GEPGEAGPSGRNGANGTAGPPGVRGQPGAIGSPGDAGRAG 199
>SB_53799| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +3
Query: 237 PRRPVR--VPIVTLANVEAWVVGRWFRWSQTSAGRPNQG 347
P RPVR VP +N ++V GR + + RP QG
Sbjct: 492 PSRPVRRQVPYYARSNTHSFVTGRTYAPLLVATSRPVQG 530
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 2/82 (2%)
Frame = -1
Query: 351 GDPGSAGRPKSGSTETTSRPPRPLHWRESRSVPSPVGEAGW--LRPYDRIFQAQQGMVPT 178
G PGSA PK+ + ++ P P + P+ G D ++ +PT
Sbjct: 86 GSPGSASPPKTNGPDVGTQQPSPASPTSIKQSPNSSSSTGQTPTEKTDSTPKSSGSTLPT 145
Query: 177 VAVRAQLLVCADACRVRPETKK 112
+ A + +P TKK
Sbjct: 146 SSTPATQNPTDSSLSTKPPTKK 167
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = -1
Query: 369 PIEVPAGDPGSAGRPKSGSTETTSRPPRPLHWRESRSVPSPVGEAGW 229
P+ A G G P + T PP+P + S PSP W
Sbjct: 123 PVIQSAKHTGKDGSPDKTFRDRTPSPPKPSARTSAPSSPSPTKHPTW 169
>SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1918
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 150 TPAAVPELQRSAPCPVVPGKFGHTGAASQPRRPVRVPIVT 269
TP+ +P P+ P FGH G P P+R PI T
Sbjct: 121 TPSCATPSSVMSPGPISPDFFGH-GMVESP-APIRSPIYT 158
>SB_3027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 27.5 bits (58), Expect = 8.2
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +3
Query: 54 FRSTRMRGRRNIV--AQRRWCFFLFRAAHGKRLHTPAA-VPELQRSAPCPVVPGKFGHTG 224
F S R R R V A R C F F R + A + EL S V + HTG
Sbjct: 695 FVSVRQRSSRLCVHLAVTRLCSFAFSKQTKTRKNRVATRISELTSSGTEGVA--EIWHTG 752
Query: 225 AASQPRRP 248
+A PRRP
Sbjct: 753 SARYPRRP 760
>SB_39621| Best HMM Match : Extensin_2 (HMM E-Value=0.078)
Length = 539
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -1
Query: 339 SAGRPKS--GSTETTSRPPRPLHWRESRSVPSPVGEAG 232
SAG KS GS +T+ RPP P RS+P +G
Sbjct: 366 SAGTVKSSQGSLKTSPRPPPPRRAASDRSLPRRRSSSG 403
>SB_24809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = -1
Query: 414 PLSRRLS-----PMLQVLDPPIEVPAGDPGSAGRPKSGSTETTSRPPRPLHWRESRSVPS 250
P+SR++S PM I P S P + +T++ P P+ + S ++PS
Sbjct: 242 PMSRQISAVITSPMAMQTSTAIPSPMAMQTSTAIPSPMAMQTSTAIPSPMARQTSTAIPS 301
Query: 249 PV 244
P+
Sbjct: 302 PM 303
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,142,750
Number of Sequences: 59808
Number of extensions: 566678
Number of successful extensions: 2932
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 2392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2904
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1349364063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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